EY660349

Overview
NameEY660349
Unique NameEY660349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_HAEIE (Glycogen synthase OS=Haemophilus influenzae (strain PittEE) GN=glgA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.862e-11
Identity = 56/171 (32.75%), Postives = 82/171 (47.95%), Query Frame = 2
Query:   23 DYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGE----EQGVELDNIIRKTGIXGIVNGMD 523
            DY DN  RF+LL     E    L+          +    V  A+DWH  L   YL    KP      AK VF IHN+AYQG+F++     + LP    +    ++G        +I+++K+G+  SD    VSP YAQE+ + E     QG+ L  +  +  + GI+NG+D
Sbjct:  102 DYGDNYKRFALLGWVGAELATGLD---------NWWRAEVVHAHDWHAGLCAAYLFNKGKP------AKSVFTIHNLAYQGQFSYHHLYEIGLP----TGMFHVEGLE---LFGQISYLKSGLFYSDASTAVSPTYAQEITTPEFAYGLQGL-LSGLKAQGRLVGILNGVD 249          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_GRABC (Glycogen synthase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=glgA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.862e-11
Identity = 63/214 (29.44%), Postives = 103/214 (48.13%), Query Frame = 2
Query:    2 HASGTGEDYQDNQLRFSLLCQAALE-APRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLK-TMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKTG--IXGIVNGMDVQE*TP*LTIY-RCQYDASL*WMRSSSEEALQQKVG 628
            +    G D+ DN  RF+  C+AA + A  IL           +  D+V  A+DW   L+P YL  +   P+       V+F IHN+A+QG    +    L LP     S D ++ Y +      I  +KAG+  +D + TVSP YA+E+   +  G+ L  ++R     + G++NG+D+ E  P    + +  +D      R+ + EAL+ + G
Sbjct:   96 YTDANGRDWADNAERFAAFCRAAADIALGILP---------DWTPDIVH-AHDWQAGLVPAYLALSEASPR-----PPVLFTIHNLAFQGVVPRDRLAALLLPPD-SFSVDGVEYYGQ------IGLLKAGLHYADALTTVSPSYAREI-QTDTGGMGLGGLLRDRAAVLNGLLNGIDMTEWNPAHDPHVKAHFDRHSLEHRTINREALRTRFG 286          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_CHLCH (Glycogen synthase OS=Chlorobium chlorochromatii (strain CaD3) GN=glgA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.862e-11
Identity = 44/132 (33.33%), Postives = 68/132 (51.52%), Query Frame = 2
Query:  152 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQEL--CSGEEQGVELDNIIRKTGIXGIVNGMDVQE*TP 541
            NDWHT+LIP  LKTMY     +++ K +F IHN   QG F  + F  L LP +  +    +          ++N +  GI   +++ T SP YA+ L   + E  GV    + R+  + G+VNG+D ++  P
Sbjct:  148 NDWHTALIPLLLKTMYASHEFFRNVKTLFSIHNAYRQGNFPLKHFQRL-LPDEVCAGLHCVKD--------EVNLLFTGIDHVELLTTTSPRYAECLRGDTPEAFGVGKRLLERELPLHGMVNGLDARQWNP 270          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_HAES1 (Glycogen synthase OS=Haemophilus somnus (strain 129Pt) GN=glgA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.044e-11
Identity = 55/171 (32.16%), Postives = 83/171 (48.54%), Query Frame = 2
Query:   23 DYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGE----EQGVELDNIIRKTGIXGIVNGMD 523
            DY DN  RF+LL     E    L+          +    +  A+DWH  L   YL    +P      AK VF IHN+AYQGRF       + LP  +  + D ++ Y       +++++KAG+  SD+   VSP YA+E+ + E     QG+ L  +  +  + GI+NG+D
Sbjct:  102 DYTDNYKRFALLAWVGAELATGLDF---------WWRAEIVHAHDWHAGLTAAYLHHKGRP------AKSVFTIHNLAYQGRFLPYHLTEIGLP-WWMFNVDGLELYG------EMSYLKAGLYYSDISTAVSPTYAKEITTPEFAYGLQGL-LQTLKAQGRLVGILNGVD 249          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_HAEPS (Glycogen synthase OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=glgA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.044e-11
Identity = 55/171 (32.16%), Postives = 80/171 (46.78%), Query Frame = 2
Query:   20 EDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQEL---CSGEEQGVELDNIIRKTGIXGIVNGMD 523
            +DY DN  RF+LL     +    L+          +G   V  A+DW   L   YLK+   P       K VF IHNIAY GRF       L LP +F    + ++ Y       +I+++KAG+  +D V  VSP YA+E+    +G      L   + +  + GI+NG+D
Sbjct:  100 QDYTDNYKRFALLGYLGAQLASGLD--------HWWGRSDVLHAHDWQAGLACAYLKSWNSP------VKSVFTIHNIAYPGRFQAYHLAELALPWEF-FHVNGLEFYG------EISYLKAGLFYADRVTAVSPTYAREITEQIAGAGMHGLLQQRLAEGALRGILNGVD 249          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_HAEIG (Glycogen synthase OS=Haemophilus influenzae (strain PittGG) GN=glgA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.044e-11
Identity = 55/171 (32.16%), Postives = 82/171 (47.95%), Query Frame = 2
Query:   23 DYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGE----EQGVELDNIIRKTGIXGIVNGMD 523
            DY DN  RF+LL     E    L+          +    V  A+DWH  L   YL    +P      AK VF IHN+AYQG+F++     + LP    +    ++G        +I+++K+G+  SD    VSP YAQE+ + E     QG+ L  +  +  + GI+NG+D
Sbjct:  102 DYGDNYKRFALLGWVGAELATGLD---------SWWRAEVVHAHDWHAGLCAAYLFNKGRP------AKSVFTIHNLAYQGQFSYHHLYEIGLP----TGMFHVEGLE---LFGQISYLKSGLFYSDASTAVSPTYAQEITTPEFAYGLQGL-LSGLKAQDRLVGILNGVD 249          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_CHLPD (Glycogen synthase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=glgA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.044e-11
Identity = 49/162 (30.25%), Postives = 82/162 (50.62%), Query Frame = 2
Query:  152 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNII--RKTGIXGIVNGMDVQE*TP*L-TIYRCQYDASL*WMRSSSEEALQQKVG 628
            +DWH SLIP  L+T+Y     +K  K V  IHNI  QG   F+ F  L LP +  S      G ++  +  ++N +  G+   D++ T S  YA  +    E+   L  I+  RK  + GI+NG+D ++  P    + + +Y       ++ +++ALQ++ G
Sbjct:  148 HDWHASLIPLLLRTVYASNEFFKDIKTVLTIHNIYRQGILPFKIFQKL-LPEEVCS------GLHR--QNDEVNMLYTGVEHVDLLTTTSKQYADTIRLDGEETYGLGRILEERKENLHGILNGIDTRQWNPATDKLIKKRYSIERLDGKADNKKALQEEAG 300          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA2_RHIME (Glycogen synthase 2 OS=Rhizobium meliloti GN=glgA2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.044e-11
Identity = 53/173 (30.64%), Postives = 83/173 (47.98%), Query Frame = 2
Query:   17 GEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNII--RKTGIXGIVNGMDVQ 529
            G DY DN  RF+     A +  R L  N   +         +  A+DWH ++   YLK          +   V  +HN+A+QG+F    F  L LPA+   S D ++ Y        I ++K G+  +D +  VSP YA+E+ S    G+ L+ ++  R   + GIVNG+D++
Sbjct:  101 GRDYADNWKRFAAFSLVASQIARGLVPNWRPH---------IIHAHDWHAAMSLLYLKYAGDD-----TIPRVLTVHNLAFQGQFPAHYFPELGLPAE-AYSIDGVEYYG------DIGFLKGGLQAADAITVVSPTYAREIMS-PAFGMGLEGVMNERHADVVGIVNGIDLE 251          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_XANCP (Glycogen synthase OS=Xanthomonas campestris pv. campestris GN=glgA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.588e-11
Identity = 54/188 (28.72%), Postives = 87/188 (46.28%), Query Frame = 2
Query:    2 HASGTGEDYQDNQLRFSLLCQAALEA----------PRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNII----RKTGIXGIVNGMD 523
            + S +G +++DN +RF+ L  AA +           PR+L+LN                  DW     PC L   Y  +    +   +  IHN+AYQG   +     L +PA+  S  +F           ++++++ GI+ +D V TVS  YAQ++ +G  QG  LD ++     K  + GIVNG+D
Sbjct:   94 YVSTSGSEFEDNAIRFATLSHAAAQIAAGRAGLGWRPRLLHLN------------------DW-----PCALAAAYV-RWSGGTTPCLLTIHNLAYQGLVPYSMAAALGIPAERVSELEFYG---------QMSFLRGGIVHADHVNTVSVSYAQQI-TGPAQGCGLDRLLAGRAAKGALSGIVNGID 247          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_XANC8 (Glycogen synthase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=glgA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.588e-11
Identity = 54/188 (28.72%), Postives = 87/188 (46.28%), Query Frame = 2
Query:    2 HASGTGEDYQDNQLRFSLLCQAALEA----------PRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNII----RKTGIXGIVNGMD 523
            + S +G +++DN +RF+ L  AA +           PR+L+LN                  DW     PC L   Y  +    +   +  IHN+AYQG   +     L +PA+  S  +F           ++++++ GI+ +D V TVS  YAQ++ +G  QG  LD ++     K  + GIVNG+D
Sbjct:   94 YVSTSGSEFEDNAIRFATLSHAAAQIAAGRAGLGWRPRLLHLN------------------DW-----PCALAAAYV-RWSGGTTPCLLTIHNLAYQGLVPYSMAAALGIPAERVSELEFYG---------QMSFLRGGIVHADHVNTVSVSYAQQI-TGPAQGCGLDRLLAGRAAKGALSGIVNGID 247          
The following BLAST results are available for this feature:
BLAST of EY660349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 258
Match NameE-valueIdentityDescription
GLGA_HAEIE3.862e-1132.75Glycogen synthase OS=Haemophilus influenzae (strai... [more]
GLGA_GRABC3.862e-1129.44Glycogen synthase OS=Granulibacter bethesdensis (s... [more]
GLGA_CHLCH3.862e-1133.33Glycogen synthase OS=Chlorobium chlorochromatii (s... [more]
GLGA_HAES15.044e-1132.16Glycogen synthase OS=Haemophilus somnus (strain 12... [more]
GLGA_HAEPS5.044e-1132.16Glycogen synthase OS=Haemophilus parasuis serovar ... [more]
GLGA_HAEIG5.044e-1132.16Glycogen synthase OS=Haemophilus influenzae (strai... [more]
GLGA_CHLPD5.044e-1130.25Glycogen synthase OS=Chlorobium phaeobacteroides (... [more]
GLGA2_RHIME5.044e-1130.64Glycogen synthase 2 OS=Rhizobium meliloti GN=glgA2... [more]
GLGA_XANCP6.588e-1128.72Glycogen synthase OS=Xanthomonas campestris pv. ca... [more]
GLGA_XANC86.588e-1128.72Glycogen synthase OS=Xanthomonas campestris pv. ca... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-021-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660349 ID=EY660349; Name=EY660349; organism=Citrus sinensis; type=EST; length=831bp
CCACGCGTCCGGGACTGGAGAGGACTACCAGGACAACCAACTTCGCTTCA
GCTTGTTGTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAAC
AGCAACAAATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGC
TAATGACTGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATA
AGCCCAAAGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAAT
ATTGCTTACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCT
TCCAGCTCAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAAC
CTGTGAGAGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCA
GACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTTGTTCTGG
TGAAGAACAAGGAGTAGAATTGGATAATATCATCCGTAAAACTGGCATTA
ANGGAATTGTGAACGGGATGGATGTCCAGGAGTGAACCCCTTGACTGACA
ATATATAGGTGTCAATATGATGCTTCACTGTGATGGATGCGAAGCTCTTC
TGAGGAAGCCCTCCAGCAGAAAGTGGGTGCCTGTCGATAGAATATTCTGT
CATAGGCTCATTGGTAGACTGAAGAGCAGAAGGCTCGATATTCTTGAGCT
GCATTCCCATTTCTCAAGAGATGTCAGATATAGTCCTGGACTGGCAAAAA
CCATGGAGAGCAGCTTGACAAGTTGAGAACTGTACCTGAGAAAGCAGAGA
GTACGAATTCATATTCTCTGCGCTATGAAAT
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