EY660349

Overview
NameEY660349
Unique NameEY660349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPB (Glycogen synthase OS=Rhodopseudomonas palustris (strain BisB18) GN=glgA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.520e-15
Identity = 58/171 (33.92%), Postives = 89/171 (52.05%), Query Frame = 2
Query:   17 GEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKTG--IXGIVNGMD 523
            G+D+ DN  RF+ L + A E  + L  +        +  D++  A+DW   L P YL+   KP+        VF +HN+A+QG+F  E    L LP     S D ++ Y        I +MK+G+  SD + TVSP YA E+  G + G+ LD ++R+    + GI+NG+D
Sbjct:  104 GKDWPDNAYRFAALARTAAEIGQGLVPS--------FVPDIIH-AHDWQAGLTPAYLRYSGKPQ-----PATVFTVHNLAFQGQFPRELLATLGLPPG-AFSVDGVEYYGS------IGYMKSGLQLSDRITTVSPAYALEI-QGPQAGMGLDGLLRQRAAQLTGILNGID 252          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_DESHD (Glycogen synthase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=glgA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.520e-15
Identity = 58/168 (34.52%), Postives = 85/168 (50.60%), Query Frame = 2
Query:   32 DNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFE-DFGLLNLPAQFKSS--FDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNII--RKTGIXGIVNGM 520
            D   +++   +A LE+ R L          P  +  +   +DWHT+L+P +LK  Y    +Y + K +F IHN+ YQG F  E    +L L  +  SS   +F  G         +N+MKAGI+ SD V TVSP YA+E+      G  L  +I  RK  + GI+NG+
Sbjct:  103 DEGEQYAYFSRAVLESVRYL----------PEFKPDIIHCHDWHTALVPLFLKAFYAQDTLYYNIKTLFTIHNLKYQGIFPREVREDVLGLSGELSSSAQLEFYGG---------VNFMKAGIMHSDQVTTVSPTYAREI-QHPYFGEGLHGVIQGRKDSLLGILNGV 250          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_GEOUR (Glycogen synthase OS=Geobacter uraniireducens (strain Rf4) GN=glgA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.822e-15
Identity = 51/169 (30.18%), Postives = 83/169 (49.11%), Query Frame = 2
Query:   23 DYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNI--IRKTGIXGIVNGMD 523
            +Y DN  RF+  C+  L+  + ++   +           V   +DW T+LIP  L+        +    V+F IHN+AYQG FA E    + L + +  + D ++ Y       K+N MK  IL +D++ TVS  Y +E+    E G  LD +  +R   + G++NG+D
Sbjct:  105 EYPDNHRRFAFFCRGVLDLLKKMDFRPD-----------VIHCHDWQTALIPLLLRREKGEDLFFSKTGVMFTIHNLAYQGLFAKETLAEMGLDSSY-FTIDCLEYYG------KVNLMKGAILSADLITTVSETYCREI-QTPESGNGLDGVLGVRNADLHGVLNGLD 254          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_AERHH (Glycogen synthase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=glgA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.283e-14
Identity = 61/203 (30.05%), Postives = 93/203 (45.81%), Query Frame = 2
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSG-EEQGVELDNIIRKTGIXGIVNGMDVQE*TP*LTIY-RCQYDASL*WMRSSSEEALQQKVG 628
            Y DN  RF+ L  AAL A   L           +  D+V   NDWHT L+P  LKT +     ++  + V  IHN A+QG F  + F  +   A ++    +  G+        +N +K G+L +D +  VSP+YA EL +     G+      R   + GI+NG D Q+  P    +    YD      +   +++LQQ+ G
Sbjct:  111 YPDNGERFAFLAAAALHASEQL----------AFAPDIVH-CNDWHTGLLPLLLKTRHAHNPFFQHTRSVISIHNAAFQGVFERQQFWAVPEIADYEQRISYDYGH--------VNLLKCGVLYADKINAVSPNYASELLTHLGAHGMASIFQQRAADLRGILNGCDYQDWDPAFDDFLPATYDVDNLAGKHICKQSLQQETG 294          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA2_GEOSL (Glycogen synthase 2 OS=Geobacter sulfurreducens GN=glgA2 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.283e-14
Identity = 55/180 (30.56%), Postives = 89/180 (49.44%), Query Frame = 2
Query:   11 GTGE-DYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKTG--IXGIVNGMDVQE*TP 541
            GT E DY DN  RF+  C++ L+  + ++   +           V   +DW T+LIP  L+        +     VF IHN+AYQG F         LP+   ++ ++++ Y       ++N MK  IL +D++ TVS  Y +E+ +   QG  L+ ++ + G  + GIVNG+D  E  P
Sbjct:  100 GTPEGDYPDNPRRFAFFCRSVLQFLKRMDFRPD-----------VIHCHDWQTALIPIILRLEAADDPFFARTATVFTIHNLAYQGLFPAPAIAETGLPSALFTT-EWLEYYG------QLNLMKGAILTADLITTVSETYRREIMT-PTQGCGLEGVLARRGDDLFGIVNGIDTDEWNP 260          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA1_GEOSL (Glycogen synthase 1 OS=Geobacter sulfurreducens GN=glgA1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.283e-14
Identity = 54/174 (31.03%), Postives = 88/174 (50.57%), Query Frame = 2
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNII--RKTGIXGIVNGMDVQE*TP 541
            Y DN  RF  L +AA+E P+++    +           VF A+DWHT+ +P +L T+Y+   +   A  V  +HN+ +QG F      +L +  +    F F+ G  K     + N +K G+  + ++ TVS  YA+E+    E G  LD ++  R   + GI+NG+D +E  P
Sbjct:  112 YMDNDNRFIFLSRAAMELPKLIGFAPD-----------VFHAHDWHTAAVPVFLNTLYRDDPLVGGAASVLTVHNMQHQGNFYPGAMEVLGIGWE---HFTFL-GLEK---DNQTNLLKGGLYHATVLNTVSEGYAREM-QTPEYGWGLDGVVRARSADLVGILNGVDYEEWNP 266          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_YERPY (Glycogen synthase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=glgA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.675e-14
Identity = 67/205 (32.68%), Postives = 102/205 (49.76%), Query Frame = 2
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCS-GEEQGVE--LDNIIRKTGIXGIVNGMDVQE*TP*L-TIYRCQYDASL*WMRSSSEEALQQKVG 628
            Y DN LRF+LL   A E    L+          Y    V  A+DWH  L   YL    +P      A+ VF +HN+AYQG F+ +    L+LPA+F   +  ++ Y       +I+++KAG+  +D V TVSP YA+E+       G+E  L  + R+  + GI+NG+D     P   T+   +YDA     ++ ++  LQ  +G
Sbjct:  103 YSDNYLRFALLGWMACELACGLD---------GYWRPEVVHAHDWHAGLTCAYLAARGRP------ARSVFTVHNLAYQGLFSADHLSELHLPAEFFQIYG-LEFYG------QISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQGRLTGILNGVDSDIWDPQSDTLLPTRYDAENLQAKAINKTHLQTAMG 285          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_YERPS (Glycogen synthase OS=Yersinia pseudotuberculosis GN=glgA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.675e-14
Identity = 67/205 (32.68%), Postives = 102/205 (49.76%), Query Frame = 2
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCS-GEEQGVE--LDNIIRKTGIXGIVNGMDVQE*TP*L-TIYRCQYDASL*WMRSSSEEALQQKVG 628
            Y DN LRF+LL   A E    L+          Y    V  A+DWH  L   YL    +P      A+ VF +HN+AYQG F+ +    L+LPA+F   +  ++ Y       +I+++KAG+  +D V TVSP YA+E+       G+E  L  + R+  + GI+NG+D     P   T+   +YDA     ++ ++  LQ  +G
Sbjct:  103 YSDNYLRFALLGWMACELACGLD---------GYWRPEVVHAHDWHAGLTCAYLAARGRP------ARSVFTVHNLAYQGLFSADHLSELHLPAEFFQIYG-LEFYG------QISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQGRLTGILNGVDSDIWDPQSDTLLPTRYDAENLQAKAINKTHLQTAMG 285          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_YERPP (Glycogen synthase OS=Yersinia pestis (strain Pestoides F) GN=glgA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.675e-14
Identity = 67/205 (32.68%), Postives = 102/205 (49.76%), Query Frame = 2
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCS-GEEQGVE--LDNIIRKTGIXGIVNGMDVQE*TP*L-TIYRCQYDASL*WMRSSSEEALQQKVG 628
            Y DN LRF+LL   A E    L+          Y    V  A+DWH  L   YL    +P      A+ VF +HN+AYQG F+ +    L+LPA+F   +  ++ Y       +I+++KAG+  +D V TVSP YA+E+       G+E  L  + R+  + GI+NG+D     P   T+   +YDA     ++ ++  LQ  +G
Sbjct:  103 YSDNYLRFALLGWMACELACGLD---------GYWRPEVVHAHDWHAGLTCAYLAARGRP------ARSVFTVHNLAYQGLFSADHLSELHLPAEFFQIYG-LEFYG------QISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQGRLTGILNGVDSDIWDPQSDTLLPTRYDAENLQAKAINKTHLQTAMG 285          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_YERPN (Glycogen synthase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=glgA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.675e-14
Identity = 67/205 (32.68%), Postives = 102/205 (49.76%), Query Frame = 2
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCS-GEEQGVE--LDNIIRKTGIXGIVNGMDVQE*TP*L-TIYRCQYDASL*WMRSSSEEALQQKVG 628
            Y DN LRF+LL   A E    L+          Y    V  A+DWH  L   YL    +P      A+ VF +HN+AYQG F+ +    L+LPA+F   +  ++ Y       +I+++KAG+  +D V TVSP YA+E+       G+E  L  + R+  + GI+NG+D     P   T+   +YDA     ++ ++  LQ  +G
Sbjct:  103 YSDNYLRFALLGWMACELACGLD---------GYWRPEVVHAHDWHAGLTCAYLAARGRP------ARSVFTVHNLAYQGLFSADHLSELHLPAEFFQIYG-LEFYG------QISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQGRLTGILNGVDSDIWDPQSDTLLPTRYDAENLQAKAINKTHLQTAMG 285          
The following BLAST results are available for this feature:
BLAST of EY660349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 258
Match NameE-valueIdentityDescription
GLGA_RHOPB7.520e-1533.92Glycogen synthase OS=Rhodopseudomonas palustris (s... [more]
GLGA_DESHD7.520e-1534.52Glycogen synthase OS=Desulfitobacterium hafniense ... [more]
GLGA_GEOUR9.822e-1530.18Glycogen synthase OS=Geobacter uraniireducens (str... [more]
GLGA_AERHH1.283e-1430.05Glycogen synthase OS=Aeromonas hydrophila subsp. h... [more]
GLGA2_GEOSL1.283e-1430.56Glycogen synthase 2 OS=Geobacter sulfurreducens GN... [more]
GLGA1_GEOSL1.283e-1431.03Glycogen synthase 1 OS=Geobacter sulfurreducens GN... [more]
GLGA_YERPY1.675e-1432.68Glycogen synthase OS=Yersinia pseudotuberculosis s... [more]
GLGA_YERPS1.675e-1432.68Glycogen synthase OS=Yersinia pseudotuberculosis G... [more]
GLGA_YERPP1.675e-1432.68Glycogen synthase OS=Yersinia pestis (strain Pesto... [more]
GLGA_YERPN1.675e-1432.68Glycogen synthase OS=Yersinia pestis bv. Antiqua (... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-021-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660349 ID=EY660349; Name=EY660349; organism=Citrus sinensis; type=EST; length=831bp
CCACGCGTCCGGGACTGGAGAGGACTACCAGGACAACCAACTTCGCTTCA
GCTTGTTGTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAAC
AGCAACAAATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGC
TAATGACTGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATA
AGCCCAAAGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAAT
ATTGCTTACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCT
TCCAGCTCAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAAC
CTGTGAGAGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCA
GACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTTGTTCTGG
TGAAGAACAAGGAGTAGAATTGGATAATATCATCCGTAAAACTGGCATTA
ANGGAATTGTGAACGGGATGGATGTCCAGGAGTGAACCCCTTGACTGACA
ATATATAGGTGTCAATATGATGCTTCACTGTGATGGATGCGAAGCTCTTC
TGAGGAAGCCCTCCAGCAGAAAGTGGGTGCCTGTCGATAGAATATTCTGT
CATAGGCTCATTGGTAGACTGAAGAGCAGAAGGCTCGATATTCTTGAGCT
GCATTCCCATTTCTCAAGAGATGTCAGATATAGTCCTGGACTGGCAAAAA
CCATGGAGAGCAGCTTGACAAGTTGAGAACTGTACCTGAGAAAGCAGAGA
GTACGAATTCATATTCTCTGCGCTATGAAAT
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