EY705788

Overview
NameEY705788
Unique NameEY705788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY705788 vs. ExPASy Swiss-Prot
Match: FH3_ORYSJ (Formin-like protein 3 OS=Oryza sativa subsp. japonica GN=FH3 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 5.101e-24
Identity = 54/92 (58.70%), Postives = 68/92 (73.91%), Query Frame = 2
Query:   11 EKVRQELVMSENDGPVSEVFCKTLKGFISVAEVEVASVTNLYSVAGRNADALALYFGEDPARCPFEQVTATLLNFVRLFRKAHEENVKQSEL 286
            EKV QEL  S NDG +S  F + LK F+  AE EV S+ +LYS  GRNAD+LA YFGEDPARCPFEQVT+ L+ FV +F+K+ +EN + +EL
Sbjct: 1122 EKVEQELAASVNDGAISVGFREALKSFLDAAEAEVRSLISLYSEVGRNADSLAQYFGEDPARCPFEQVTSILVIFVNMFKKSRDENARTAEL 1213          
BLAST of EY705788 vs. ExPASy Swiss-Prot
Match: FH19_ARATH (Formin-like protein 19 OS=Arabidopsis thaliana GN=FH19 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.662e-24
Identity = 61/92 (66.30%), Postives = 71/92 (77.17%), Query Frame = 2
Query:   11 EKVRQELVMSENDGPVSEVFCKTLKGFISVAEVEVASVTNLYSVAGRNADALALYFGEDPARCPFEQVTATLLNFVRLFRKAHEENVKQSEL 286
            EK++QEL  SE DGPVS+VF K LK FIS AE +VA+V  LY  A  NA+ALA YFG      PFEQVTATLL+F+RLF+KAHEENVKQ+EL
Sbjct:  361 EKLKQELTASETDGPVSQVFRKLLKEFISNAETQVATVMALYYPARGNAEALAHYFG---YHYPFEQVTATLLSFIRLFKKAHEENVKQAEL 449          
BLAST of EY705788 vs. ExPASy Swiss-Prot
Match: FH17_ARATH (Formin-like protein 17 OS=Arabidopsis thaliana GN=FH17 PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.938e-23
Identity = 57/91 (62.64%), Postives = 67/91 (73.63%), Query Frame = 2
Query:   11 EKVRQELVMSENDGPVSEVFCKTLKGFISVAEVEVASVTNLYSVAGRNADALALYFGEDPARCPFEQVTATLLNFVRLFRKAHEENVKQSE 283
            EKV QE   SE D  +S+ F   LK F+SVAE EV S+ +LYS  G +ADALALYFGEDPAR PFEQV +TL NFVR+F ++HEEN KQ E
Sbjct:  382 EKVVQEFTASETDCQISKHFHMNLKEFLSVAEGEVRSLASLYSTVGGSADALALYFGEDPARVPFEQVVSTLQNFVRIFVRSHEENCKQVE 472          
BLAST of EY705788 vs. ExPASy Swiss-Prot
Match: FH14_ARATH (Formin-like protein 14 OS=Arabidopsis thaliana GN=FH14 PE=2 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 4.318e-23
Identity = 54/91 (59.34%), Postives = 68/91 (74.73%), Query Frame = 2
Query:   11 EKVRQELVMSENDGPVSEVFCKTLKGFISVAEVEVASVTNLYSVAGRNADALALYFGEDPARCPFEQVTATLLNFVRLFRKAHEENVKQSE 283
            EKV QEL+ SENDG +S  F K LK F+ +A+ EV ++ +LYS  GRNAD+L+ YFGEDPARCPFEQVT  L  F++ F K+ EEN KQ+E
Sbjct: 1103 EKVEQELMASENDGAISLGFRKVLKEFLDMADEEVKTLASLYSEVGRNADSLSHYFGEDPARCPFEQVTKILTLFMKTFIKSREENEKQAE 1193          
The following BLAST results are available for this feature:
BLAST of EY705788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
FH3_ORYSJ5.101e-2458.70Formin-like protein 3 OS=Oryza sativa subsp. japon... [more]
FH19_ARATH6.662e-2466.30Formin-like protein 19 OS=Arabidopsis thaliana GN=... [more]
FH17_ARATH1.938e-2362.64Formin-like protein 17 OS=Arabidopsis thaliana GN=... [more]
FH14_ARATH4.318e-2359.34Formin-like protein 14 OS=Arabidopsis thaliana GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-047-H09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY705788 ID=EY705788; Name=EY705788; organism=Citrus sinensis; type=EST; length=701bp
CCACGCGTCCGAAAAGGTTAGACAGGAGCTTGTTATGTCTGAAAATGATG
GACCCGTATCTGAAGTTTTTTGTAAGACACTGAAAGGATTCATATCTGTT
GCTGAGGTTGAGGTGGCATCTGTAACAAATCTCTATTCTGTGGCGGGTAG
AAATGCAGATGCCCTTGCATTATATTTTGGTGAGGATCCTGCTCGTTGCC
CATTTGAGCAAGTTACTGCAACTCTGTTAAATTTTGTGAGGTTGTTCCGA
AAAGCACATGAAGAGAATGTGAAACAGTCTGAATTGGAGAGGAAGAAAGC
TGAGAAGGAGGCTGAGATGGAGAAGGCTAAGGGAATTAATCTTACGGAGA
AGAGTGTGAAGTTTGCTGATGGTTGACTGCTTTCTGTCTCCACATGGGAA
ATTTAGCTCCCGCCATAAAACAGAAGTCTGCCGTGATATTTTATTTGAAA
GACGGCAAAAATGCTGCTGTCATAACTTGGTGACACCTCCTGCTGGCCAG
GGGGGAAGGGATCGAAAGCCTTCGAATGGCGAAGAAAAAAAGGCGAAAAG
CCTCCGCTGTTGGGCCGGCGACACACATCCCAGATGGGAATACCGAACAG
CGGTTAACGGGATAAATGAGGAAATCACAAAGTAAAATATAAATAGTAGA
CATGTAAAAAAAGTCCTAAGTTTGGAATATAAAAAGTAATTAGTCATATA
C
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