EY705787

Overview
NameEY705787
Unique NameEY705787
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length825
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: SKP1B_DICDI (SCF ubiquitin ligase complex protein SKP1b OS=Dictyostelium discoideum GN=fpaB-1 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.038e-45
Identity = 90/152 (59.21%), Postives = 119/152 (78.29%), Query Frame = 3
Query:   66 ITLKSSDGETFEVEETVALESQTIKHMVED-DCADTVIPLPNVTSTILSKVIEYCKKHVEAGS--GDKKDDKSTEDDLKTWDADFVKVDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVPRENPW 512
            + L+SSD + FE+E+ +A  S TIK+M+ED   +D  IPLPNVTSTIL KV++YC+ H +  S  GD K D+   DD+  +D DF KVDQ TLF+L+LAANYL+I+ LLD+TC+TVA+MI+GKTPEEIRK FNIKNDF+P+EEE++ +EN W
Sbjct:    4 VKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDAPIPLPNVTSTILEKVLDYCRHHHQHPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKTVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEW 155          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: ASK10_ARATH (SKP1-like protein 10 OS=Arabidopsis thaliana GN=ASK10 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.273e-45
Identity = 92/157 (58.60%), Postives = 112/157 (71.34%), Query Frame = 3
Query:   54 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKH-VEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVPRENPWAFQ 521
            S KKI LKSSDG +FEVEE  A + QTI HM EDDC D  IPLP VT  IL  VIEYC KH V+A +        +++DLK WD +F++  Q+T+FDL++AANYLNI+ LLDL CQTVADMIK  T E  RK FNI+ND++ +EEE V REN W F+
Sbjct:    2 STKKIILKSSDGHSFEVEEEAACQCQTIAHMSEDDCTDNGIPLPEVTGKILEMVIEYCNKHHVDAAN------PCSDEDLKKWDKEFMEKYQSTIFDLIMAANYLNIKSLLDLACQTVADMIKDNTVEHTRKFFNIENDYTHEEEEAVRRENQWGFE 152          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: ASK9_ARATH (SKP1-like protein 9 OS=Arabidopsis thaliana GN=ASK9 PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.534e-44
Identity = 91/158 (57.59%), Postives = 115/158 (72.78%), Query Frame = 3
Query:   54 SEKKITLKSSDGETFEVEETVALESQTI-KHMVEDDCADTVIPLPNVTSTILSKVIEYCKKH-VEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVPRENPWAFQ 521
            S KKI LKSSDG +FEVEE  A + Q I  HM E+DC D  IPLPNVT  IL+ VIEYC KH V+A +        ++DDLK WD +F++ D +T+FDL+ AANYLNI+ L DL CQTVA++IKG TPE+IR+ FNI+ND +P+EE  + REN WAF+
Sbjct:    2 STKKIILKSSDGHSFEVEEEAARQCQIIIAHMSENDCTDNGIPLPNVTGKILAMVIEYCNKHHVDAAN------PCSDDDLKKWDKEFMEKDTSTIFDLIKAANYLNIKSLFDLACQTVAEIIKGNTPEQIREFFNIENDLTPEEEAAIRRENKWAFE 153          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: ASK16_ARATH (SKP1-like protein 16 OS=Arabidopsis thaliana GN=ASK16 PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.779e-43
Identity = 86/166 (51.81%), Postives = 116/166 (69.88%), Query Frame = 3
Query:   54 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKD---------DKSTEDDLKTWDADFVK-VDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVPRENPWAFQ 521
            S  KI L SSD E+FEVEE VA + + I HM++DDCAD  IPL NVT  IL+ VIEYCKKHV     D  D         ++  +++L+TWDA+F+K  D  T+  L+LA NYLN++ LL LTCQTVAD +K  +PEE+R+ FNI+ND++P+EE+ + +EN WAF+
Sbjct:    2 SSNKIVLTSSDDESFEVEEAVARKLKVIAHMIDDDCADKAIPLENVTGNILALVIEYCKKHVLDDVDDSDDSTEATSENVNEEAKNELRTWDAEFMKEFDMETVMKLILAVNYLNVQDLLGLTCQTVADHMKDMSPEEVRELFNIENDYTPEEEDAIRKENAWAFE 167          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: ASK19_ARATH (SKP1-like protein 19 OS=Arabidopsis thaliana GN=ASK19 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.936e-43
Identity = 96/189 (50.79%), Postives = 121/189 (64.02%), Query Frame = 3
Query:   54 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVE-----------AGSGDKK--------DD----KSTEDD---------LKTWDADFVK-VDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVPRENPWAFQ 521
            S KKI L SSDGE+F+VEE VA + Q + H++EDDCA   IP+PNVT  IL+KVIEYCKKHVE           +  GDK         DD    +STE D         L  WDA F+K  D  T+FD++LAANYLN++GL DL  +T+AD IK  TPEE+R+ FNI+NDF+P+EEE +  EN W F+
Sbjct:    2 SSKKIVLTSSDGESFKVEEVVARKLQIVGHIIEDDCATNKIPIPNVTGEILAKVIEYCKKHVEDDDDVVETHESSTKGDKTVEEAKKKPDDVAVPESTEGDDEAEDKKEKLNEWDAKFMKDFDIKTIFDIILAANYLNVQGLFDLCSKTIADYIKDMTPEEVRELFNIENDFTPEEEEAIRNENAWTFE 190          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: SKP1_XENLA (S-phase kinase-associated protein 1 OS=Xenopus laevis GN=skp1 PE=1 SV=3)

HSP 1 Score: 173.326 bits (438), Expect = 1.436e-42
Identity = 87/156 (55.77%), Postives = 115/156 (73.72%), Query Frame = 3
Query:   66 ITLKSSDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTE--DDLKTWDADFVKVDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVPRENPW 512
            I L+SSDGE FEV+  +A +S TIK M+ED     +  D  +PLPNV + IL KVI++C  H +     + D+   +  DD+  WD +F+KVDQ TLF+L+LAANYL+I+GLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +V +EN W
Sbjct:    4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQW 159          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: SKP1_RAT (S-phase kinase-associated protein 1 OS=Rattus norvegicus GN=Skp1 PE=2 SV=3)

HSP 1 Score: 173.326 bits (438), Expect = 1.436e-42
Identity = 87/156 (55.77%), Postives = 115/156 (73.72%), Query Frame = 3
Query:   66 ITLKSSDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTE--DDLKTWDADFVKVDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVPRENPW 512
            I L+SSDGE FEV+  +A +S TIK M+ED     +  D  +PLPNV + IL KVI++C  H +     + D+   +  DD+  WD +F+KVDQ TLF+L+LAANYL+I+GLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +V +EN W
Sbjct:    4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQW 159          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: SKP1_PONAB (S-phase kinase-associated protein 1 OS=Pongo abelii GN=SKP1 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.436e-42
Identity = 87/156 (55.77%), Postives = 115/156 (73.72%), Query Frame = 3
Query:   66 ITLKSSDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTE--DDLKTWDADFVKVDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVPRENPW 512
            I L+SSDGE FEV+  +A +S TIK M+ED     +  D  +PLPNV + IL KVI++C  H +     + D+   +  DD+  WD +F+KVDQ TLF+L+LAANYL+I+GLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +V +EN W
Sbjct:    4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQW 159          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: SKP1_MOUSE (S-phase kinase-associated protein 1 OS=Mus musculus GN=Skp1 PE=1 SV=3)

HSP 1 Score: 173.326 bits (438), Expect = 1.436e-42
Identity = 87/156 (55.77%), Postives = 115/156 (73.72%), Query Frame = 3
Query:   66 ITLKSSDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTE--DDLKTWDADFVKVDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVPRENPW 512
            I L+SSDGE FEV+  +A +S TIK M+ED     +  D  +PLPNV + IL KVI++C  H +     + D+   +  DD+  WD +F+KVDQ TLF+L+LAANYL+I+GLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +V +EN W
Sbjct:    4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQW 159          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: SKP1_MACFA (S-phase kinase-associated protein 1 OS=Macaca fascicularis GN=SKP1 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.436e-42
Identity = 87/156 (55.77%), Postives = 115/156 (73.72%), Query Frame = 3
Query:   66 ITLKSSDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTE--DDLKTWDADFVKVDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVPRENPW 512
            I L+SSDGE FEV+  +A +S TIK M+ED     +  D  +PLPNV + IL KVI++C  H +     + D+   +  DD+  WD +F+KVDQ TLF+L+LAANYL+I+GLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +V +EN W
Sbjct:    4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQW 159          
The following BLAST results are available for this feature:
BLAST of EY705787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SKP1B_DICDI4.038e-4559.21SCF ubiquitin ligase complex protein SKP1b OS=Dict... [more]
ASK10_ARATH5.273e-4558.60SKP1-like protein 10 OS=Arabidopsis thaliana GN=AS... [more]
ASK9_ARATH1.534e-4457.59SKP1-like protein 9 OS=Arabidopsis thaliana GN=ASK... [more]
ASK16_ARATH3.779e-4351.81SKP1-like protein 16 OS=Arabidopsis thaliana GN=AS... [more]
ASK19_ARATH4.936e-4350.79SKP1-like protein 19 OS=Arabidopsis thaliana GN=AS... [more]
SKP1_XENLA1.436e-4255.77S-phase kinase-associated protein 1 OS=Xenopus lae... [more]
SKP1_RAT1.436e-4255.77S-phase kinase-associated protein 1 OS=Rattus norv... [more]
SKP1_PONAB1.436e-4255.77S-phase kinase-associated protein 1 OS=Pongo abeli... [more]
SKP1_MOUSE1.436e-4255.77S-phase kinase-associated protein 1 OS=Mus musculu... [more]
SKP1_MACFA1.436e-4255.77S-phase kinase-associated protein 1 OS=Macaca fasc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-047-H08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY705787 ID=EY705787; Name=EY705787; organism=Citrus sinensis; type=EST; length=825bp
CCACGCGTCCGAAATAGCTTTAGCGAAAACCGTAACTCTCAGAAACGATG
TCGTCTGAGAAGAAGATCACTCTGAAGAGTTCGGACGGTGAGACGTTCGA
GGTGGAGGAGACGGTGGCCCTCGAGTCGCAGACAATCAAGCACATGGTGG
AGGACGACTGCGCCGACACCGTAATCCCGCTGCCGAATGTGACGAGCACG
ATTCTCTCGAAGGTTATCGAGTACTGCAAGAAGCACGTTGAGGCTGGGTC
AGGGGACAAGAAGGACGACAAGTCGACCGAGGATGATCTCAAGACCTGGG
ATGCAGACTTCGTCAAGGTTGATCAGAATACCCTCTTTGACCTAGTCTTG
GCCGCCAATTACCTGAACATTAGGGGTTTGCTGGACTTGACCTGCCAAAC
TGTTGCAGACATGATCAAGGGGAAGACTCCAGAGGAGATCCGCAAGACCT
TCAACATCAAGAATGACTTCTCTCCCGATGAGGAAGAGGAGGTTCCGAGA
GAGAACCCTTGGGCTTTCCAGTGAAGGACTGAAGTGATGAAGGCTCGGAA
TTAATATTTGTGAGAGGAATGCGGTTCATGATGGGGGGCTTTAGGTGGGT
GCAGTAGGCGCCAGTGTTGGACCGGGAGTTCGCCTTTGGGGGAGACTGGG
GAGTGTGGCGGAGTAGAGGTGCGTGAACGCCTGAGGATGGAGTATAGCTG
CGGCTTTGCCCCGCCGAAAGAAAACAGGGAAAGGGGGGGCGCCTTGCGGG
AGATGGAGCGTCGGGCGCGCGGGGTGGCGGGAGTGTTTGTGGAGTGGAGG
CTATGAGGATTTGTGCCGCATTTAT
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