EY705787

Overview
NameEY705787
Unique NameEY705787
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length825
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: SKP1_HUMAN (S-phase kinase-associated protein 1 OS=Homo sapiens GN=SKP1 PE=1 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.436e-42
Identity = 87/156 (55.77%), Postives = 115/156 (73.72%), Query Frame = 3
Query:   66 ITLKSSDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTE--DDLKTWDADFVKVDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVPRENPW 512
            I L+SSDGE FEV+  +A +S TIK M+ED     +  D  +PLPNV + IL KVI++C  H +     + D+   +  DD+  WD +F+KVDQ TLF+L+LAANYL+I+GLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +V +EN W
Sbjct:    4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQW 159          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: SKP1_CHICK (S-phase kinase-associated protein 1 OS=Gallus gallus GN=SKP1 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.436e-42
Identity = 87/156 (55.77%), Postives = 115/156 (73.72%), Query Frame = 3
Query:   66 ITLKSSDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTE--DDLKTWDADFVKVDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVPRENPW 512
            I L+SSDGE FEV+  +A +S TIK M+ED     +  D  +PLPNV + IL KVI++C  H +     + D+   +  DD+  WD +F+KVDQ TLF+L+LAANYL+I+GLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +V +EN W
Sbjct:    4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQW 159          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: SKP1_CAVPO (S-phase kinase-associated protein 1 OS=Cavia porcellus GN=SKP1 PE=2 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.436e-42
Identity = 87/156 (55.77%), Postives = 115/156 (73.72%), Query Frame = 3
Query:   66 ITLKSSDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTE--DDLKTWDADFVKVDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVPRENPW 512
            I L+SSDGE FEV+  +A +S TIK M+ED     +  D  +PLPNV + IL KVI++C  H +     + D+   +  DD+  WD +F+KVDQ TLF+L+LAANYL+I+GLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +V +EN W
Sbjct:    4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQW 159          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: SKP1_BOVIN (S-phase kinase-associated protein 1 OS=Bos taurus GN=SKP1 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.436e-42
Identity = 87/156 (55.77%), Postives = 115/156 (73.72%), Query Frame = 3
Query:   66 ITLKSSDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTE--DDLKTWDADFVKVDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVPRENPW 512
            I L+SSDGE FEV+  +A +S TIK M+ED     +  D  +PLPNV + IL KVI++C  H +     + D+   +  DD+  WD +F+KVDQ TLF+L+LAANYL+I+GLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +V +EN W
Sbjct:    4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQW 159          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: ASK18_ARATH (SKP1-like protein 18 OS=Arabidopsis thaliana GN=ASK18 PE=1 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.436e-42
Identity = 86/156 (55.13%), Postives = 112/156 (71.79%), Query Frame = 3
Query:   54 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTEDDLKTWDADFV-KVDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVPRENPWAF 518
            S  KI L SSDGE+FE++E VA +   I HM+ED+CA   IPL NVT  ILSK+IEY K HV   S ++ +D+  + +L +WDA F+ K+D  T+F ++LAANYLN  GLL    QTVAD IK KTPEE+R+ FNI+NDF+P+EEEE+ +EN W F
Sbjct:    2 SSNKILLTSSDGESFEIDEAVARKFLIIVHMMEDNCAGEAIPLENVTGDILSKIIEYAKMHVNEPS-EEDEDEEAKKNLDSWDAKFMEKLDLETIFKIILAANYLNFEGLLGFASQTVADYIKDKTPEEVREIFNIENDFTPEEEEEIRKENAWTF 156          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: ASK5_ARATH (SKP1-like protein 5 OS=Arabidopsis thaliana GN=ASK5 PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.588e-41
Identity = 89/159 (55.97%), Postives = 114/159 (71.70%), Query Frame = 3
Query:   63 KITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNT-LFDLVLAANYLNIRGLLDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFSPDEEEEVPRENPWAFQ 521
            KI LKSSDG++FE++E VA +S  I HMVED CA  VIPL NVTS IL  VI+YC+KHV++           E+DLK WDADF+K  + T LFD+++AANYLNI+ LLDLTC+TV     AD++ GKTP+EIR  FNI+ND + +E  ++  EN WAFQ
Sbjct:    4 KIMLKSSDGKSFEIDEDVARKSIAINHMVEDGCATDVIPLRNVTSKILKIVIDYCEKHVKS---------KEEEDLKEWDADFMKTIETTILFDVMMAANYLNIQSLLDLTCKTVSDLLQADLLSGKTPDEIRAHFNIENDLTAEEVAKIREENQWAFQ 153          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: ASK8_ARATH (SKP1-like protein 8 OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.535e-39
Identity = 82/157 (52.23%), Postives = 112/157 (71.34%), Query Frame = 3
Query:   54 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKH-VEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVPRENPWAFQ 521
            S KKI LKSS+G+TFE+EE  A + QTI HM+E +C D VI +  +TS IL  VIEYC KH V+A +        ++DDL+ WD +F++ D++T+F L  AAN+LN + LL L  QTVADMIKG TP+++R+ FNI+ND +P+EE  + REN WAF+
Sbjct:    2 STKKIMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCNKHHVDAAN------PCSDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMIKGNTPKQMREFFNIENDLTPEEEAAIRRENKWAFE 152          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: ASK17_ARATH (SKP1-like protein 17 OS=Arabidopsis thaliana GN=ASK17 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.244e-38
Identity = 80/156 (51.28%), Postives = 107/156 (68.59%), Query Frame = 3
Query:   54 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTEDDLKTWDADFVK-VDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVPRENPWAF 518
            S KKI L SSD E FE++E VA + Q + HM++DDCAD  I L NVT  IL+ +IEYCKKHV        DD   +++  TWDA+FVK +D +TLF L+ AA+YL + GL +L  Q +AD    KT  EIR+ FNI+ND++P+EEEE+ ++N WAF
Sbjct:    2 SSKKIVLTSSDDECFEIDEAVARKMQMVAHMIDDDCADKAIRLQNVTGKILAIIIEYCKKHV--------DDVEAKNEFVTWDAEFVKNIDMDTLFKLLDAADYLIVIGLKNLIAQAIADYTADKTVNEIRELFNIENDYTPEEEEELRKKNEWAF 149          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: SKP1_SCHPO (Suppressor of kinetochore protein 1 OS=Schizosaccharomyces pombe GN=skp1 PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.177e-36
Identity = 82/158 (51.90%), Postives = 114/158 (72.15%), Query Frame = 3
Query:   63 KITLKSSDGETFEVEETVALESQTIKHMVEDDCADTV-IPLPNVTSTILSKVIEYCKKH---VEAGSGDKKD---DKSTEDDLKTWDADFVKVDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVPRENPWA 515
            KI L SSD E F V++ +A  S  IK+M+ED     V IPLPNV+S +L KV+E+C+ H   + +G+ ++ D    KST  D+  WD  F+ VDQ  LF++VLA+NYL+I+ LLD  C+TVA+MI+GK+PE+IRKTFNI NDF+P+EEE++ +EN WA
Sbjct:    3 KIKLISSDNEEFVVDQLIAERSMLIKNMLEDVGEINVPIPLPNVSSNVLRKVLEWCEHHKNDLYSGTEEESDIRLKKST--DIDEWDRKFMAVDQEMLFEIVLASNYLDIKPLLDTGCKTVANMIRGKSPEDIRKTFNIPNDFTPEEEEQIRKENEWA 158          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: SKP1_YEAST (Suppressor of kinetochore protein 1 OS=Saccharomyces cerevisiae GN=SKP1 PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.490e-31
Identity = 72/186 (38.71%), Postives = 109/186 (58.60%), Query Frame = 3
Query:   66 ITLKSSDGETFEVEETVALESQTIKHMVED-----------------------------------DCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTED-DLKTWDADFVKVDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVPRENPWA 515
            + L S +GE F V++ +A  S  +K+ + D                                   D  + V+P+PNV S++L KVIE+ + H ++   D+ DD S +   + +WD +F+KVDQ  L++++LAANYLNI+ LLD  C+ VA+MI+G++PEEIR+TFNI NDF+P+EE  + REN WA
Sbjct:    6 VVLVSGEGERFTVDKKIAERSLLLKNYLNDMHDSNLQNNSDSESDSDSETNHKSKDNNNGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIRRENEWA 191          
The following BLAST results are available for this feature:
BLAST of EY705787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SKP1_HUMAN1.436e-4255.77S-phase kinase-associated protein 1 OS=Homo sapien... [more]
SKP1_CHICK1.436e-4255.77S-phase kinase-associated protein 1 OS=Gallus gall... [more]
SKP1_CAVPO1.436e-4255.77S-phase kinase-associated protein 1 OS=Cavia porce... [more]
SKP1_BOVIN1.436e-4255.77S-phase kinase-associated protein 1 OS=Bos taurus ... [more]
ASK18_ARATH1.436e-4255.13SKP1-like protein 18 OS=Arabidopsis thaliana GN=AS... [more]
ASK5_ARATH1.588e-4155.97SKP1-like protein 5 OS=Arabidopsis thaliana GN=ASK... [more]
ASK8_ARATH2.535e-3952.23SKP1-like protein 8 OS=Arabidopsis thaliana GN=ASK... [more]
ASK17_ARATH6.244e-3851.28SKP1-like protein 17 OS=Arabidopsis thaliana GN=AS... [more]
SKP1_SCHPO1.177e-3651.90Suppressor of kinetochore protein 1 OS=Schizosacch... [more]
SKP1_YEAST1.490e-3138.71Suppressor of kinetochore protein 1 OS=Saccharomyc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-047-H08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY705787 ID=EY705787; Name=EY705787; organism=Citrus sinensis; type=EST; length=825bp
CCACGCGTCCGAAATAGCTTTAGCGAAAACCGTAACTCTCAGAAACGATG
TCGTCTGAGAAGAAGATCACTCTGAAGAGTTCGGACGGTGAGACGTTCGA
GGTGGAGGAGACGGTGGCCCTCGAGTCGCAGACAATCAAGCACATGGTGG
AGGACGACTGCGCCGACACCGTAATCCCGCTGCCGAATGTGACGAGCACG
ATTCTCTCGAAGGTTATCGAGTACTGCAAGAAGCACGTTGAGGCTGGGTC
AGGGGACAAGAAGGACGACAAGTCGACCGAGGATGATCTCAAGACCTGGG
ATGCAGACTTCGTCAAGGTTGATCAGAATACCCTCTTTGACCTAGTCTTG
GCCGCCAATTACCTGAACATTAGGGGTTTGCTGGACTTGACCTGCCAAAC
TGTTGCAGACATGATCAAGGGGAAGACTCCAGAGGAGATCCGCAAGACCT
TCAACATCAAGAATGACTTCTCTCCCGATGAGGAAGAGGAGGTTCCGAGA
GAGAACCCTTGGGCTTTCCAGTGAAGGACTGAAGTGATGAAGGCTCGGAA
TTAATATTTGTGAGAGGAATGCGGTTCATGATGGGGGGCTTTAGGTGGGT
GCAGTAGGCGCCAGTGTTGGACCGGGAGTTCGCCTTTGGGGGAGACTGGG
GAGTGTGGCGGAGTAGAGGTGCGTGAACGCCTGAGGATGGAGTATAGCTG
CGGCTTTGCCCCGCCGAAAGAAAACAGGGAAAGGGGGGGCGCCTTGCGGG
AGATGGAGCGTCGGGCGCGCGGGGTGGCGGGAGTGTTTGTGGAGTGGAGG
CTATGAGGATTTGTGCCGCATTTAT
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