EY705787

Overview
NameEY705787
Unique NameEY705787
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length825
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: ASK7_ARATH (SKP1-like protein 7 OS=Arabidopsis thaliana GN=ASK7 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.458e-27
Identity = 65/122 (53.28%), Postives = 84/122 (68.85%), Query Frame = 3
Query:   54 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKK-HVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLVLAANYLNIRGLLDLTCQTVADMI 416
            S KKI LKSSDG+ FE+EE  A + QTI HM+E +C D VIP+ NVTS IL  VIEYC K HV+A       +  +++DLK WD +F++ DQ T+F L+ AA  L+I+ LL L  QTVADM+
Sbjct:    2 STKKIMLKSSDGKMFEIEEETARQCQTIAHMIEAECTDNVIPVSNVTSEILEMVIEYCNKHHVDAA------NPCSDEDLKKWDKEFMEKDQYTIFHLMNAAYDLHIKSLLALAYQTVADMV 117          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: ASK6_ARATH (SKP1-like protein 6 OS=Arabidopsis thaliana GN=ASK6 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.066e-21
Identity = 54/87 (62.07%), Postives = 65/87 (74.71%), Query Frame = 3
Query:  135 IKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTEDDLKTWDADFV-KVDQNTLFDLVLAANYLNIRGLLDLT 392
            IK M EDDCAD  IPLPNVTS IL  VIEYCKKHV          +S E+DLK WDA+F+ K++Q+ LFD+++AANYLNI+ LLDLT
Sbjct:    3 IKGMAEDDCADNGIPLPNVTSKILLLVIEYCKKHVV---------ESKEEDLKKWDAEFMKKMEQSILFDVMMAANYLNIQSLLDLT 80          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: ASK21_ARATH (SKP1-like protein 21 OS=Arabidopsis thaliana GN=ASK21 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.120e-13
Identity = 47/147 (31.97%), Postives = 84/147 (57.14%), Query Frame = 3
Query:   66 ITLKSSDGETFEVEETVALESQTI-KHMVEDDCADT---VIPLPN-VTSTILSKVIEYCKKHVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEE 491
            I L+++DG   +VE+ VA+    I + +++     +    I LP  V   +LS + +YC+ H   G  +K        + K +D  F+++D   L +L  AA+ L ++ L+DLT + +A +I+GKTPEEIR+ F++ +D + +E+ E
Sbjct:   18 IWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISLPQRVNPAMLSLIFDYCRFHQVPGRSNK--------ERKVYDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLE 156          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: ASK20_ARATH (SKP1-like protein 20 OS=Arabidopsis thaliana GN=ASK20 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.120e-13
Identity = 50/155 (32.26%), Postives = 88/155 (56.77%), Query Frame = 3
Query:   42 ETMSSEKKITLKSSDGETFEVEETVALESQTI-KHMVEDDCADT---VIPLPN-VTSTILSKVIEYCKKHVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEE 491
            ETM S   I L+++DG   +VE+ VA+    I + +++     +    I LP  V   + S +++YC+ H   G  +K        + KT+D  F+++D   L +L  AA+ L ++ L+DLT + +A +I+GK PEEIR+ F++ +D + +E+ E
Sbjct:   12 ETMKSY--IWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISLPQRVNPAMFSLILDYCRFHQLPGRSNK--------ERKTYDERFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKNPEEIREIFHLPDDLTEEEKLE 156          
The following BLAST results are available for this feature:
BLAST of EY705787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
ASK7_ARATH8.458e-2753.28SKP1-like protein 7 OS=Arabidopsis thaliana GN=ASK... [more]
ASK6_ARATH4.066e-2162.07SKP1-like protein 6 OS=Arabidopsis thaliana GN=ASK... [more]
ASK21_ARATH3.120e-1331.97SKP1-like protein 21 OS=Arabidopsis thaliana GN=AS... [more]
ASK20_ARATH3.120e-1332.26SKP1-like protein 20 OS=Arabidopsis thaliana GN=AS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-047-H08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY705787 ID=EY705787; Name=EY705787; organism=Citrus sinensis; type=EST; length=825bp
CCACGCGTCCGAAATAGCTTTAGCGAAAACCGTAACTCTCAGAAACGATG
TCGTCTGAGAAGAAGATCACTCTGAAGAGTTCGGACGGTGAGACGTTCGA
GGTGGAGGAGACGGTGGCCCTCGAGTCGCAGACAATCAAGCACATGGTGG
AGGACGACTGCGCCGACACCGTAATCCCGCTGCCGAATGTGACGAGCACG
ATTCTCTCGAAGGTTATCGAGTACTGCAAGAAGCACGTTGAGGCTGGGTC
AGGGGACAAGAAGGACGACAAGTCGACCGAGGATGATCTCAAGACCTGGG
ATGCAGACTTCGTCAAGGTTGATCAGAATACCCTCTTTGACCTAGTCTTG
GCCGCCAATTACCTGAACATTAGGGGTTTGCTGGACTTGACCTGCCAAAC
TGTTGCAGACATGATCAAGGGGAAGACTCCAGAGGAGATCCGCAAGACCT
TCAACATCAAGAATGACTTCTCTCCCGATGAGGAAGAGGAGGTTCCGAGA
GAGAACCCTTGGGCTTTCCAGTGAAGGACTGAAGTGATGAAGGCTCGGAA
TTAATATTTGTGAGAGGAATGCGGTTCATGATGGGGGGCTTTAGGTGGGT
GCAGTAGGCGCCAGTGTTGGACCGGGAGTTCGCCTTTGGGGGAGACTGGG
GAGTGTGGCGGAGTAGAGGTGCGTGAACGCCTGAGGATGGAGTATAGCTG
CGGCTTTGCCCCGCCGAAAGAAAACAGGGAAAGGGGGGGCGCCTTGCGGG
AGATGGAGCGTCGGGCGCGCGGGGTGGCGGGAGTGTTTGTGGAGTGGAGG
CTATGAGGATTTGTGCCGCATTTAT
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