EY660272
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A_ASPCL (ATP-dependent RNA helicase eIF4A OS=Aspergillus clavatus GN=tif1 PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 9.658e-33 Identity = 71/119 (59.66%), Postives = 88/119 (73.95%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 L+ LLRGIYA+GFE+PSA ++R I+P KG DVI QAQ+GTGKTATF LQ++D L CQ L+LAPTRELA I+KV+ A+GD++ + HAC GGT+VRED Q G VVVGT Sbjct: 32 LKPELLRGIYAYGFERPSAIQQRAIMPIIKGSDVIAQAQSGTGKTATFSISALQKIDPNLKACQALILAPTRELAQQIQKVVVAIGDFMSLECHACIGGTNVREDMKALQDGPQVVVGT 150 HSP 2 Score: 23.0978 bits (48), Expect = 9.658e-33 Identity = 10/19 (52.63%), Postives = 15/19 (78.95%), Query Frame = 2 Query: 263 EGQDXXTSYDEVYDSFDAL 319 EGQ ++YDE+ DSFD++ Sbjct: 13 EGQ-IESNYDEITDSFDSM 30
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A_SCHPO (ATP-dependent RNA helicase eIF4A OS=Schizosaccharomyces pombe GN=tif1 PE=1 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 9.660e-33 Identity = 71/119 (59.66%), Postives = 88/119 (73.95%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 L+ LLRGIYA+GFE+PSA ++R I+P DV+ QAQ+GTGKTATF +LQ++D L QCQ L+LAPTRELA I+KV+ ALGD + + HAC GGT VR+D QAG HVVVGT Sbjct: 26 LKPELLRGIYAYGFERPSAIQQRAIMPILGERDVLAQAQSGTGKTATFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGDLMNVECHACIGGTLVRDDMAALQAGVHVVVGT 144 HSP 2 Score: 22.3274 bits (46), Expect = 9.660e-33 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 2 Query: 281 TSYDEVYDSFD 313 T+YDEV D+FD Sbjct: 12 TNYDEVIDTFD 22
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A_AJECN (ATP-dependent RNA helicase eIF4A OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=TIF1 PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 9.662e-33 Identity = 70/119 (58.82%), Postives = 87/119 (73.11%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 L+ LLRG+YA+GFE+PSA ++R I+P KG DVI QAQ+GTGKTATF LQ++D L CQ L+LAPTRELA I+KV+ A+GD++ + HAC GG SVRED Q G VVVGT Sbjct: 32 LRAELLRGVYAYGFERPSAIQQRAIMPVIKGSDVIAQAQSGTGKTATFSISALQKVDTNLKACQALILAPTRELAQQIQKVVVAIGDFMSIECHACIGGISVREDMKALQDGPQVVVGT 150 HSP 2 Score: 25.0238 bits (53), Expect = 9.662e-33 Identity = 12/28 (42.86%), Postives = 17/28 (60.71%), Query Frame = 2 Query: 263 EGQDXXTSYDEVYDSFDALGTAGKPFEG 346 EGQ ++YDE+ DSFDA+ + G Sbjct: 13 EGQ-IESNYDEITDSFDAMNLRAELLRG 39
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A_NEOFI (ATP-dependent RNA helicase eIF4A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tif1 PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.638e-32 Identity = 71/119 (59.66%), Postives = 88/119 (73.95%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 L+ LLRGIYA+GFE+PSA ++R I+P KG DVI QAQ+GTGKTATF LQ+LD + CQ L+LAPTRELA I+KV+ A+GD++ + HAC GGT+VRED Q G VVVGT Sbjct: 32 LKPELLRGIYAYGFERPSAIQQRAILPIIKGNDVIAQAQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFMNIECHACIGGTNVREDMKALQEGPQVVVGT 150 HSP 2 Score: 23.0978 bits (48), Expect = 1.638e-32 Identity = 10/19 (52.63%), Postives = 15/19 (78.95%), Query Frame = 2 Query: 263 EGQDXXTSYDEVYDSFDAL 319 EGQ ++YDE+ DSFD++ Sbjct: 13 EGQ-IESNYDEITDSFDSM 30
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A_CHAGB (ATP-dependent RNA helicase eIF4A OS=Chaetomium globosum GN=TIF1 PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.638e-32 Identity = 69/119 (57.98%), Postives = 89/119 (74.79%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 L+ LLRGIYA+GFE+PSA ++R I+P KG DVI QAQ+GTGKTATF +LQ++D + CQ L+LAPTRELA I+KV+ A+GD++ + HAC GGTSVR+D Q G V+VGT Sbjct: 31 LKSELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQKIDPTVKSCQALILAPTRELAQQIQKVVIAIGDFMNIECHACIGGTSVRDDMKALQDGPQVIVGT 149 HSP 2 Score: 23.0978 bits (48), Expect = 1.638e-32 Identity = 13/37 (35.14%), Postives = 17/37 (45.95%), Query Frame = 2 Query: 236 TKKNEPXATEGQDXXTSYDEVYDSFDALGTAGKPFEG 346 T K EGQ ++YDE DSFD + + G Sbjct: 3 TDKGLEDVPEGQ-IESNYDETVDSFDDMNLKSELLRG 38
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A3_XENTR (Eukaryotic initiation factor 4A-III OS=Xenopus tropicalis GN=eif4a3 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.118e-32 Identity = 72/119 (60.50%), Postives = 88/119 (73.95%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 L+E+LLRGIYA+GFEKPSA ++R I KG DVI Q+Q+GTGKTATFC +LQ LD + + Q L+LAPTRELAG I+KV+ ALGDY+ + HAC GGT+V ED G HVV GT Sbjct: 49 LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGT 167
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A3_DANRE (Eukaryotic initiation factor 4A-III OS=Danio rerio GN=eif4a3 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.118e-32 Identity = 72/119 (60.50%), Postives = 88/119 (73.95%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 L+E+LLRGIYA+GFEKPSA ++R I KG DVI Q+Q+GTGKTATFC +LQ LD + + Q L+LAPTRELAG I+KV+ ALGDY+ + HAC GGT+V ED G HVV GT Sbjct: 40 LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGT 158
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: I4A3A_XENLA (Eukaryotic initiation factor 4A-III-A OS=Xenopus laevis GN=eif4a3-A PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.118e-32 Identity = 72/119 (60.50%), Postives = 88/119 (73.95%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 L+E+LLRGIYA+GFEKPSA ++R I KG DVI Q+Q+GTGKTATFC +LQ LD + + Q L+LAPTRELAG I+KV+ ALGDY+ + HAC GGT+V ED G HVV GT Sbjct: 49 LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGT 167
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A1_RABIT (Eukaryotic initiation factor 4A-I (Fragment) OS=Oryctolagus cuniculus GN=EIF4A1 PE=1 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 2.766e-32 Identity = 73/120 (60.83%), Postives = 89/120 (74.17%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVR-EDKGICQAGGHVVVGT 680 L E+LLRGIYA+GFEKPSA ++R I+P KG DVI QAQ+GTGKTATF ILQQ++ L Q LVLAPTRELA I+KV+ ALGDY+G HAC GGT+VR E + + H++VGT Sbjct: 31 LSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGT 150
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A1_PANTR (Eukaryotic initiation factor 4A-I OS=Pan troglodytes GN=EIF4A1 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.766e-32 Identity = 73/120 (60.83%), Postives = 89/120 (74.17%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVR-EDKGICQAGGHVVVGT 680 L E+LLRGIYA+GFEKPSA ++R I+P KG DVI QAQ+GTGKTATF ILQQ++ L Q LVLAPTRELA I+KV+ ALGDY+G HAC GGT+VR E + + H++VGT Sbjct: 39 LSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGT 158 The following BLAST results are available for this feature:
BLAST of EY660272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 190
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660272 ID=EY660272; Name=EY660272; organism=Citrus sinensis; type=EST; length=933bpback to top |