EY660272

Overview
NameEY660272
Unique NameEY660272
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length933
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: FAL1_MAGGR (ATP-dependent RNA helicase FAL1 OS=Magnaporthe grisea GN=FAL1 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.192e-29
Identity = 67/119 (56.30%), Postives = 84/119 (70.59%), Query Frame = 3 
Query:  324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680
            L+E+LLRGIYA+G+E PSA + R IV  CKG D I QAQ+GTGKTATF   +LQ +D  + + Q LVL+PTRELA  I+ V+ ALGDY+  + HAC GGT+V ED      G H+V GT
Sbjct:   34 LKESLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGT 152
[Close]
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: FAL1_EMENI (ATP-dependent RNA helicase fal1 OS=Emericella nidulans GN=fal1 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.376e-29
Identity = 67/119 (56.30%), Postives = 83/119 (69.75%), Query Frame = 3 
Query:  324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680
            L+E+LLRGIYA+G+E PSA + R IV  CKG D I QAQ+GTGKTATF    LQ +D  + + Q LVL+PTRELA  I+ V+ ALGDY+  + HAC GGT++ ED      G HVV GT
Sbjct:   32 LKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISALQVIDTVVRETQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQHVVSGT 150
[Close]
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A3_MACFA (Eukaryotic initiation factor 4A-III OS=Macaca fascicularis GN=EIF4A3 PE=2 SV=3)

HSP 1 Score: 126.331 bits (316), Expect = 2.423e-28
Identity = 67/119 (56.30%), Postives = 83/119 (69.75%), Query Frame = 3 
Query:  324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680
            L+E+LLRGIYA+GFEKPSA ++R I    KG DVI Q+Q+GTGKTATF   +LQ LD  + + Q L+LAP RELA  I+K +  LGDY+  + HAC GGT+V ED      G HVV GT
Sbjct:   45 LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPARELAVQIQKGLLTLGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGT 163
[Close]
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: FAL1_PICGU (ATP-dependent RNA helicase FAL1 OS=Pichia guilliermondii GN=FAL1 PE=3 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 5.398e-28
Identity = 64/119 (53.78%), Postives = 78/119 (65.55%), Query Frame = 3 
Query:  324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680
            L+  LL+GIY +GFE PSA + R I+   +G D I QAQ+GTGKTATF  GIL  +D     CQ LVL+PTRELA  IE V+  LGDY+  + HAC GGT V ED    Q G H++ GT
Sbjct:   31 LKPELLKGIYNYGFEAPSAIQSRAIMQIIRGRDTIAQAQSGTGKTATFSIGILSSIDTKSKDCQALVLSPTRELAQQIENVIEHLGDYMNVRSHACIGGTQVGEDVKKLQQGQHIISGT 149
[Close]
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: RH34_ORYSJ (DEAD-box ATP-dependent RNA helicase 34 OS=Oryza sativa subsp. japonica GN=Os03g0566800 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.499e-27
Identity = 61/119 (51.26%), Postives = 83/119 (69.75%), Query Frame = 3 
Query:  324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680
            ++E+LLRGIYA+GFEKPSA ++R ++P   G DVI QAQ+GTGKT+     + Q +D  + + Q L+L+PTRELA   E+VM A+GDY+  + HAC GG S+ ED    + G HVV GT
Sbjct:   38 IREDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDYINIQVHACIGGKSIGEDIRKLEHGVHVVSGT 156
[Close]
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: FAL1_ASHGO (ATP-dependent RNA helicase FAL1 OS=Ashbya gossypii GN=FAL1 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.570e-27
Identity = 64/119 (53.78%), Postives = 79/119 (66.39%), Query Frame = 3 
Query:  324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680
            LQENLLRGIY +GFE PSA + R I    +G DVI QAQ+GTGKTATF  G+LQ +D      Q LVL+PTRELA  I +V+R LGDY+     AC GG ++++D      G HV+ GT
Sbjct:   30 LQENLLRGIYGYGFEAPSAIQSRAITQIIRGKDVIAQAQSGTGKTATFTIGMLQVIDSSSKDLQALVLSPTRELAAQISQVVRNLGDYMNVVALACTGGKALQQDISKVNKGCHVMSGT 148
[Close]
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A_KLULA (ATP-dependent RNA helicase eIF4A OS=Kluyveromyces lactis GN=TIF1 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.968e-27
Identity = 61/119 (51.26%), Postives = 83/119 (69.75%), Query Frame = 3 
Query:  324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680
            L+E LLRGI+ +GF +PSA ++R I+P  +G DV+ QAQ+GTGKT TF    LQ +D  +   QGL+LAPTRELA  I+KV+ AL  ++  K HAC GGTS++ED    + G  ++VGT
Sbjct:   29 LKEELLRGIFGYGFVEPSAIQQRAILPIIEGKDVLAQAQSGTGKTGTFSIAALQNIDEKIKAPQGLILAPTRELALQIQKVVMALAIHMDVKVHACIGGTSLQEDSEALRGGAQIIVGT 147
[Close]
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: RH2_ORYSJ (DEAD-box ATP-dependent RNA helicase 2 OS=Oryza sativa subsp. japonica GN=Os01g0639100 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.268e-26
Identity = 59/119 (49.58%), Postives = 83/119 (69.75%), Query Frame = 3 
Query:  324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680
            ++++LLRGIYA+GFEKPSA ++R ++P   G DVI QAQ+GTGKT+     + Q +D  + + Q L+L+PTRELA   E+VM A+GD++  + HAC GG S+ ED    + G HVV GT
Sbjct:   38 IRDDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDFINIQVHACIGGKSIGEDIRKLEHGVHVVSGT 156
[Close]
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A_ASHGO (ATP-dependent RNA helicase eIF4A OS=Ashbya gossypii GN=TIF1 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.268e-26
Identity = 63/119 (52.94%), Postives = 81/119 (68.07%), Query Frame = 3 
Query:  324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680
            L+E LLRGIY +GF  PSA ++R I+P  +G DV+ QAQ+GTGKT TF    LQ++D  +   Q L+LAPTRELA  I+KV+ AL  ++  K HAC GGT  RED    +AG  +VVGT
Sbjct:   29 LKEVLLRGIYGYGFVDPSAIQQRAILPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDESIKAPQALILAPTRELALQIQKVVMALALHMDVKVHACIGGTDPREDAEALRAGAQIVVGT 147
[Close]
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: FAL1_YARLI (ATP-dependent RNA helicase FAL1 OS=Yarrowia lipolytica GN=FAL1 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 5.052e-26
Identity = 63/119 (52.94%), Postives = 81/119 (68.07%), Query Frame = 3 
Query:  324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680
            L+++LLRGIYA+GFE PSA + R I    KG D I QAQ+GTGKTATF   +L+ +D    + Q +VL+PTRELA  I+ V+ ALGDY+  + HAC GGTS+  D    +AG  VV GT
Sbjct:   31 LKDDLLRGIYAYGFEAPSAIQSRAITQIIKGRDTIAQAQSGTGKTATFSISMLEVIDTKHRETQAMVLSPTRELATQIQSVILALGDYMNVQCHACIGGTSLSVDMKKLEAGQQVVSGT 149
The following BLAST results are available for this feature:
BLAST of EY660272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
FAL1_MAGGR2.192e-2956.30ATP-dependent RNA helicase FAL1 OS=Magnaporthe gri... [more]
FAL1_EMENI6.376e-2956.30ATP-dependent RNA helicase fal1 OS=Emericella nidu... [more]
IF4A3_MACFA2.423e-2856.30Eukaryotic initiation factor 4A-III OS=Macaca fasc... [more]
FAL1_PICGU5.398e-2853.78ATP-dependent RNA helicase FAL1 OS=Pichia guillier... [more]
RH34_ORYSJ3.499e-2751.26DEAD-box ATP-dependent RNA helicase 34 OS=Oryza sa... [more]
FAL1_ASHGO4.570e-2753.78ATP-dependent RNA helicase FAL1 OS=Ashbya gossypii... [more]
IF4A_KLULA5.968e-2751.26ATP-dependent RNA helicase eIF4A OS=Kluyveromyces ... [more]
RH2_ORYSJ2.268e-2649.58DEAD-box ATP-dependent RNA helicase 2 OS=Oryza sat... [more]
IF4A_ASHGO2.268e-2652.94ATP-dependent RNA helicase eIF4A OS=Ashbya gossypi... [more]
FAL1_YARLI5.052e-2652.94ATP-dependent RNA helicase FAL1 OS=Yarrowia lipoly... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-020-D06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660272 ID=EY660272; Name=EY660272; organism=Citrus sinensis; type=EST; length=933bp
TGTGGTACGCCTGAGGNACTGGTCCGGATTCTTTCANCAGGGGGGCGNCC
GCCACGGCGTGACAAGAGGAGGGTGTNAACCCNAGGAACAANANGCAGCA
AAAGAAAGAGGTGTGTCTCCAAAGAGAGAGGGAAAACCAACNCGNNCNCG
CGAAGANAANCACCAGCAGCAAAGCAGGGCAGAGATGGCTGGAAAGGCAC
CCGAAGGANCACAACCCGAAGCACGNCAGNAGGACACCAAGAAGAACGAA
CCGGNCGCGACGGAGGGGCAAGACCNCNNCACTTCTTATGATGAAGTTTA
TGACAGTTTTGATGCATTGGGTACTGCAGGAAAACCTTTTGAGGGGAATC
TATGCTTTTGGGTTTGAGAAGCCCTCTGCTAGTGAGGAAAGGGGAATTGT
TCCCTTCTGCAAGGGACTTGACGTCATTCAGCAGGCTCAGGCTGGAACTG
GGAAAACAGCAACTTTCTGCTCTGGAATTTTGCAGCAACTTGATTATGGG
CTTGTCCAATGTCAGGGCCTGGTATTGGCACCCACTAGGGAACTAGCTGG
ACTGATTGAGAAAGTAATGAGGGCACTTGGCGATTATCTTGGGGGCAAGG
GTCATGCTTGTGGTGGTGGGACAAGTGTTCGCGAGGATAAGGGGATTTGT
CAAGCTGGGGGTCATGTGGTTGTTGGGACTCCTGGGGCGAGGGGTTGAAA
TGCTGCGCCGTGAGGTTTTAGCGCCCGGATTAATTTAACATGGTTGGACT
GGATGGGAGGTGATGAAAGGCTGTTCCCGGGTTGTAGGGTCGGATTTTTG
ATATTGTTGCGGAGGGTTGGGGGTAAGGTGAGGGGGGGGTCTCTCTGGGA
AATGGGTTCGGGGGGCCGGGGGATTGAGGGGAGTTGATGGAAAAGCTGGA
AGGATTTGGGGTAATGGGGGGAAATGCCCGTAG
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