EY660270

Overview
NameEY660270
Unique NameEY660270
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length947
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660270 vs. ExPASy Swiss-Prot
Match: XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.894e-44
Identity = 81/157 (51.59%), Postives = 108/157 (68.79%), Query Frame = 1
Query:   67 KKDFEQRVNLWFDPAADSHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 528
            K + EQR+ LWFDP+   H Y+ILWN + IVF+VD++PIR +KN+      FP NQPM +YS+LW ADDWATRGGLEK +W+ APF A Y+ F I+GC     A  CA+    WW+   ++ L A + RR +WVR+   IY+YCTD++R+PV P EC
Sbjct:  134 KGNREQRIYLWFDPSKAYHTYSILWNMYQIVFFVDNIPIRTFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFVASYKGFHIDGCQASVEAKYCATQGRMWWDQKEFRDLDAEQWRRLKWVRMKWTIYNYCTDRTRFPVMPAEC 290          
BLAST of EY660270 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 7.199e-44
Identity = 80/156 (51.28%), Postives = 104/156 (66.67%), Query Frame = 1
Query:   79 EQRVNLWFDPAADSHLYTILWNHHHIVFYVDDVPIRVYKNSGRAP----FPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGC--PVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 528
            E R +LWFDP  D H Y+ILWN+H +VF+VD VPIRVYKNS + P    FP  +PM ++S++W ADDWATRGGLEK DW KAPF + Y+DF +EGC    P PA  ++   NWW+  +   L+  +   Y WV+ N ++YDYC D  R+P  P EC
Sbjct:  131 EMRHSLWFDPTKDYHTYSILWNNHQLVFFVDRVPIRVYKNSDKVPNNDFFPNQKPMYLFSSIWNADDWATRGGLEKTDWKKAPFVSSYKDFAVEGCRWKDPFPACVSTTTENWWDQYDAWHLSKTQKMDYAWVQRNLVVYDYCKDSERFPTLPWEC 286          
BLAST of EY660270 vs. ExPASy Swiss-Prot
Match: XTH9_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana GN=XTH9 PE=2 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 1.501e-41
Identity = 77/155 (49.68%), Postives = 99/155 (63.87%), Query Frame = 1
Query:   79 EQRVNLWFDPAADSHLYTILWNHHHIVFYVDDVPIRVYKNSGRA--PFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGP---ANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 528
            EQR+NLWFDP  + H Y+ILW+   +VF VD+ PIRV KN      PF  +Q MGVYS++W ADDWAT+GGL K DWS APF A Y++F I+ C +P     + C  +   WW+      L+  +  +  WVR NHMIYDYC D +R+PV P EC
Sbjct:  130 EQRLNLWFDPTTEFHTYSILWSKRSVVFMVDETPIRVQKNLEEKGIPFAKDQAMGVYSSIWNADDWATQGGLVKTDWSHAPFVASYKEFQIDACEIPTTTDLSKCNGDQKFWWDEPTVSELSLHQNHQLIWVRANHMIYDYCFDATRFPVTPLEC 284          
BLAST of EY660270 vs. ExPASy Swiss-Prot
Match: XTH3_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 9.730e-41
Identity = 74/153 (48.37%), Postives = 99/153 (64.71%), Query Frame = 1
Query:   79 EQRVNLWFDPAADSHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN---CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 528
            E+R  LWF+P    H Y +LWN + IVFYVD++PIRVYKN     +P ++PM V ++LW  DDWAT GG  K++WS +PF A++RDF + GC + G +N      +   WW A NYQ L+  E + Y  VR  +M YDYCTD+S+Y  PP EC
Sbjct:  138 EERFLLWFNPTKHYHTYGLLWNPYQIVFYVDNIPIRVYKNENGVSYP-SKPMQVEASLWNGDDWATDGGRTKVNWSYSPFIAHFRDFALSGCNIDGRSNNVGACESSNYWWNAGNYQRLSGNEQKLYEHVRSKYMNYDYCTDRSKYQTPPREC 289          
BLAST of EY660270 vs. ExPASy Swiss-Prot
Match: XTH10_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 10 OS=Arabidopsis thaliana GN=XTH10 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.835e-39
Identity = 74/155 (47.74%), Postives = 99/155 (63.87%), Query Frame = 1
Query:   79 EQRVNLWFDPAADSHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPG--NWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVP-PPEC 528
            E+R++LWFDPA D H Y+ILWN H IVF VD +PIR+Y+N G     +P  QPM V ++LW  + WATRGG +KIDWSK PF A + D+ I+ C   G  +  +     NWW  N + +LT ++ R ++WVR  H+IYDYC D  R+    P EC
Sbjct:  140 EERIHLWFDPAKDFHTYSILWNIHQIVFMVDQIPIRLYRNHGEKGVAYPRLQPMSVQASLWNGESWATRGGHDKIDWSKGPFVASFGDYKIDACIWIGNTSFCNGESTENWWNKNEFSSLTRVQKRWFKWVRKYHLIYDYCQDYGRFNNKLPKEC 294          
BLAST of EY660270 vs. ExPASy Swiss-Prot
Match: XTH20_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 4.088e-39
Identity = 74/156 (47.44%), Postives = 105/156 (67.31%), Query Frame = 1
Query:   73 DFEQRVNLWFDPAADSHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCP-VPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPV-PPPEC 528
            D EQ+ +LWFDP  D H Y I+WN   ++F +D +PIR +KNS     PFP +QPM +Y++LWEA+ WATRGGLEK DWSKAPF A+YR+++++ C    G ++C++N  +W+     Q L      R +W +  +M+Y+YCTDK R+P   PPEC
Sbjct:  131 DKEQQFHLWFDPTVDFHTYCIIWNPQRVIFTIDGIPIREFKNSEALGVPFPKHQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVDACVWSNGKSSCSAN-SSWFT----QVLDFKGKNRVKWAQRKYMVYNYCTDKKRFPQGAPPEC 281          
BLAST of EY660270 vs. ExPASy Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.553e-38
Identity = 84/166 (50.60%), Postives = 100/166 (60.24%), Query Frame = 1
Query:   67 KKDFEQRVNLWFDPAADSHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGC-------PVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVP-PPECLA 534
            K D EQ+  LWFDP A+ H YTILWN   I+F VD  PIR +KN  S    FP N+PM +YS+LW ADDWATRGGL K DWSKAPF A YR F  E C         P  +   +  G+W      Q L +   +R RWV+ N+MIY+YCTD  R+P   P ECLA
Sbjct:  122 KGDKEQQFKLWFDPTANFHTYTILWNPQRIIFTVDGTPIREFKNMESLGTLFPKNKPMRMYSSLWNADDWATRGGLVKTDWSKAPFTASYRGFQQEACVWSNGKSSCPNASKQGTTTGSWLS----QELDSTAQQRMRWVQRNYMIYNYCTDAKRFPQGLPKECLA 283          
BLAST of EY660270 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 2.650e-38
Identity = 81/161 (50.31%), Postives = 102/161 (63.35%), Query Frame = 1
Query:   67 KKDFEQRVNLWFDPAADSHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPV-PGPANCASNPGNWW---EANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVP-PPEC 528
            K + EQ+  LWFDP  + H Y+++W   HI+F VD+VPIRV+ N+ +   PFP NQPM +YS+LW ADDWATRGGL K DWSKAPF AYYR F+   C V  G + C     + +   E+     L A   RR RWV+   MIYDYC+D  R+P   PPEC
Sbjct:  126 KGNREQQFYLWFDPTKNFHTYSLVWRPQHIIFMVDNVPIRVFNNAEQLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRGFNAAACTVSSGSSFCDPKFKSSFTNGESQVANELNAYGRRRLRWVQKYFMIYDYCSDLKRFPQGFPPEC 286          
BLAST of EY660270 vs. ExPASy Swiss-Prot
Match: XTH23_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.007e-37
Identity = 83/165 (50.30%), Postives = 104/165 (63.03%), Query Frame = 1
Query:   67 KKDFEQRVNLWFDPAADSHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPV-PGPANCAS-----NPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVP-PPECLA 534
            K D EQ+  LWFDP +D H Y+ILWN   I+F VD  PIR +KN  S    FP NQPM +YS+LW A++WATRGGL K DWSKAPF A YR F+ E C V  G ++C +     + G+W      Q L +    + RWV+ N+MIY+YCTD  R+P   P ECLA
Sbjct:  125 KGDREQQFKLWFDPTSDFHTYSILWNPQRIIFSVDGTPIREFKNMESQGTLFPKNQPMRMYSSLWNAEEWATRGGLVKTDWSKAPFTASYRGFNEEACVVINGQSSCPNVSGQGSTGSWLS----QELDSTGQEQMRWVQNNYMIYNYCTDAKRFPQGLPRECLA 285          
BLAST of EY660270 vs. ExPASy Swiss-Prot
Match: XTH19_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.315e-37
Identity = 78/156 (50.00%), Postives = 103/156 (66.03%), Query Frame = 1
Query:   73 DFEQRVNLWFDPAADSHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCP-VPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYP-VPPPEC 528
            D EQ+ +LWFDP A+ H Y I WN   I+F VD +PIR + N  S   PFP  QPM +Y++LWEA+ WATRGGLEK DWSKAPF AYYR++++EGC  V G + C +N   W+     Q L +    R + V+  +M+Y+YC+DK R+P   PPEC
Sbjct:  126 DKEQQFHLWFDPTANFHTYCITWNPQRIIFTVDGIPIREFMNAESRGVPFPTKQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAYYRNYNVEGCVWVNGKSVCPAN-SQWFT----QKLDSNGQTRMKGVQSKYMVYNYCSDKKRFPRGVPPEC 276          
The following BLAST results are available for this feature:
BLAST of EY660270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTH4_ARATH1.894e-4451.59Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH8_ARATH7.199e-4451.28Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH9_ARATH1.501e-4149.68Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH3_ARATH9.730e-4148.37Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH10_ARATH1.835e-3947.74Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH20_ARATH4.088e-3947.44Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH22_ARATH1.553e-3850.60Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH16_ARATH2.650e-3850.31Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH23_ARATH1.007e-3750.30Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH19_ARATH1.315e-3750.00Probable xyloglucan endotransglucosylase/hydrolase... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-020-D04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660270 ID=EY660270; Name=EY660270; organism=Citrus sinensis; type=EST; length=947bp
TCTGGTACCCTGCGGTACCTCGTCCGGAATTCCTTCAACACACAGGTGTC
CGATCTATGCTTTGCAAAAAAAGATTTTGAACAGAGAGTGAACCTCTGGT
TTGACCCTGCTGCAGACTCCCACCTTTACACAATTCTCTGGAACCATCAC
CATATTGTCTTCTATGTGGATGATGTGCCCATCAGGGTTTACAAAAACAG
TGGAAGGGCTCCATTTCCAATGAACCAACCCATGGGGGTGTATTCAACGC
TGTGGGAAGCAGATGACTGGGCAACAAGAGGTGGTCTAGAGAAAATAGAT
TGGAGCAAAGCTCCTTTTTATGCTTATTACAGAGACTTTGATATTGAGGG
CTGCCCAGTTCCTGGACCAGCAAACTGTGCCTCGAACCCAGGTAACTGGT
GGGAGGCAAATAATTATCAAGCCCTCACCGCCATGGAAGCAAGAAGATAC
AGATGGGTTCGTCTCAACCACATGATCTATGATTATTGCACTGATAAATC
AAGATACCCAGTACCCCCACCGGAATGCCTTGCCGGCATATAAATTCAAC
CCGCCAATTAATTAAGCAGTTGGACGGGACTCCATATCCGGATCATATCA
TGTATATTACTTCACGTACACGTCCTTTGTATTATTCCCTATTCGTGTGA
AAAGACTTATACGCATTTCAAGGGGAGGGGCGGGAAGGGGAAAAAAACAT
TGGGGGGCTTTTTAATGTTATTTTGGGGAGGGGGAAATATGTGGGGTTTC
CTGGTCTGCCTTGGCCCTAAATTAAGCCTCGATTTGGATGCCACGTATTT
TTGTGCCATTAAAAGTTTCTTTCAAATTGGGAAAAAAAAAAAAAAAAAGC
CGGCGCGCTCTTAAAGGACCAAGCTTTACCACCCCGTGCATTGCCAGCTA
TTACCCTCTTAAAGTGGGCCCCTAAATTCAATTCACTGGGCCGCCTT
back to top