EY660263

Overview
NameEY660263
Unique NameEY660263
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length918
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY660263 vs. ExPASy Swiss-Prot
Match: PYGL_MOUSE (Glycogen phosphorylase, liver form OS=Mus musculus GN=Pygl PE=1 SV=3)

HSP 1 Score: 57.3806 bits (137), Expect = 1.188e-12
Identity = 27/62 (43.55%), Postives = 41/62 (66.13%), Query Frame = 3 
Query:  351 PASELSQHISTAWMEARATTDVKFAKNGCMVVGTLDGANGEIREQVGEDIFLLLCDRAYEIA 536
            PA++LS+ ISTA  EA  T ++KF  NG + +GT+DGAN E+ E+ GE+   +   R  ++A
Sbjct:  659 PATDLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRVDDVA 720

HSP 2 Score: 36.965 bits (84), Expect = 1.188e-12
Identity = 24/64 (37.50%), Postives = 32/64 (50.00%), Query Frame = 1 
Query:   64 LKSIFELERQLMTI*RIVDTYKEMLEMSAVKRNAK--FVPRVCIFGGKAFASYVQANTIGKFIT 249
            +K I E +RQL+    ++  Y        +K++ K  FVPR  I GGKA   Y  A  I K IT
Sbjct:  568 VKRIHEYKRQLLNCLHVITMYNR------IKKDPKKFFVPRTVIIGGKAAPGYHMAKMIIKLIT 625
[Close]
BLAST of EY660263 vs. ExPASy Swiss-Prot
Match: PYGL_RAT (Glycogen phosphorylase, liver form OS=Rattus norvegicus GN=Pygl PE=1 SV=5)

HSP 1 Score: 57.3806 bits (137), Expect = 1.543e-12
Identity = 27/62 (43.55%), Postives = 41/62 (66.13%), Query Frame = 3 
Query:  351 PASELSQHISTAWMEARATTDVKFAKNGCMVVGTLDGANGEIREQVGEDIFLLLCDRAYEIA 536
            PA++LS+ ISTA  EA  T ++KF  NG + +GT+DGAN E+ E+ GE+   +   R  ++A
Sbjct:  659 PATDLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRVDDVA 720

HSP 2 Score: 36.5798 bits (83), Expect = 1.543e-12
Identity = 23/64 (35.94%), Postives = 32/64 (50.00%), Query Frame = 1 
Query:   64 LKSIFELERQLMTI*RIVDTYKEMLEMSAVKRNAK--FVPRVCIFGGKAFASYVQANTIGKFIT 249
            +K I E +RQL+    ++  Y        +K++ K  FVPR  I GGKA   Y  A  I K +T
Sbjct:  568 VKRIHEYKRQLLNCLHVITMYNR------IKKDPKKFFVPRTVIIGGKAAPGYHMAKMIIKLVT 625
[Close]
BLAST of EY660263 vs. ExPASy Swiss-Prot
Match: PYGL_HUMAN (Glycogen phosphorylase, liver form OS=Homo sapiens GN=PYGL PE=1 SV=4)

HSP 1 Score: 56.9954 bits (136), Expect = 1.543e-12
Identity = 27/62 (43.55%), Postives = 41/62 (66.13%), Query Frame = 3 
Query:  351 PASELSQHISTAWMEARATTDVKFAKNGCMVVGTLDGANGEIREQVGEDIFLLLCDRAYEIA 536
            PA++LS+ ISTA  EA  T ++KF  NG + +GT+DGAN E+ E+ GE+   +   R  ++A
Sbjct:  659 PATDLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRIDDVA 720

HSP 2 Score: 36.965 bits (84), Expect = 1.543e-12
Identity = 24/64 (37.50%), Postives = 32/64 (50.00%), Query Frame = 1 
Query:   64 LKSIFELERQLMTI*RIVDTYKEMLEMSAVKRNAK--FVPRVCIFGGKAFASYVQANTIGKFIT 249
            +K I E +RQL+    ++  Y        +K++ K  FVPR  I GGKA   Y  A  I K IT
Sbjct:  568 VKRIHEYKRQLLNCLHVITMYNR------IKKDPKKLFVPRTVIIGGKAAPGYHMAKMIIKLIT 625
[Close]
BLAST of EY660263 vs. ExPASy Swiss-Prot
Match: PYGB_MOUSE (Glycogen phosphorylase, brain form OS=Mus musculus GN=Pygb PE=1 SV=3)

HSP 1 Score: 57.3806 bits (137), Expect = 1.543e-12
Identity = 27/61 (44.26%), Postives = 40/61 (65.57%), Query Frame = 3 
Query:  351 PASELSQHISTAWMEARATTDVKFAKNGCMVVGTLDGANGEIREQVGEDIFLLLCDRAYEI 533
            PA++LSQ ISTA  EA  T ++KF  NG + +GT+DGAN E+ E+ GE+   +   R  ++
Sbjct:  659 PAADLSQQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRVEDV 719

HSP 2 Score: 36.5798 bits (83), Expect = 1.543e-12
Identity = 24/68 (35.29%), Postives = 32/68 (47.06%), Query Frame = 1 
Query:   64 LKSIFELERQLMTI*RIVDTYKEMLEMSAVKRNAKFVPRVCIFGGKAFASYVQANTIGKFITDGGATV 267
            +K I E +RQL+    I+  Y  + +  A      FVPR  + GGKA   Y  A  I K +T  G  V
Sbjct:  568 VKRIHEYKRQLLNCLHIITLYNRIKKDPA----KAFVPRTVMIGGKAAPGYHMAKMIIKLVTSIGDVV 631
[Close]
BLAST of EY660263 vs. ExPASy Swiss-Prot
Match: PYGM_HUMAN (Glycogen phosphorylase, muscle form OS=Homo sapiens GN=PYGM PE=1 SV=6)

HSP 1 Score: 58.5362 bits (140), Expect = 2.004e-12
Identity = 27/61 (44.26%), Postives = 41/61 (67.21%), Query Frame = 3 
Query:  351 PASELSQHISTAWMEARATTDVKFAKNGCMVVGTLDGANGEIREQVGEDIFLLLCDRAYEI 533
            PA++LS+ ISTA  EA  T ++KF  NG + +GT+DGAN E+ E+ GE+ F +   R  ++
Sbjct:  659 PAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDV 719

HSP 2 Score: 35.039 bits (79), Expect = 2.004e-12
Identity = 22/68 (32.35%), Postives = 32/68 (47.06%), Query Frame = 1 
Query:   64 LKSIFELERQLMTI*RIVDTYKEMLEMSAVKRNAKFVPRVCIFGGKAFASYVQANTIGKFITDGGATV 267
            +K I E +RQL+    ++  Y  +      + N  FVPR  + GGKA   Y  A  I + +T  G  V
Sbjct:  568 VKRIHEYKRQLLNCLHVITLYNRIKR----EPNKFFVPRTVMIGGKAAPGYHMAKMIIRLVTAIGDVV 631
[Close]
BLAST of EY660263 vs. ExPASy Swiss-Prot
Match: PYGM_MOUSE (Glycogen phosphorylase, muscle form OS=Mus musculus GN=Pygm PE=1 SV=3)

HSP 1 Score: 58.5362 bits (140), Expect = 2.601e-12
Identity = 27/61 (44.26%), Postives = 41/61 (67.21%), Query Frame = 3 
Query:  351 PASELSQHISTAWMEARATTDVKFAKNGCMVVGTLDGANGEIREQVGEDIFLLLCDRAYEI 533
            PA++LS+ ISTA  EA  T ++KF  NG + +GT+DGAN E+ E+ GE+ F +   R  ++
Sbjct:  659 PAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDV 719

HSP 2 Score: 34.6538 bits (78), Expect = 2.601e-12
Identity = 24/68 (35.29%), Postives = 31/68 (45.59%), Query Frame = 1 
Query:   64 LKSIFELERQLMTI*RIVDTYKEMLEMSAVKRNAKFVPRVCIFGGKAFASYVQANTIGKFITDGGATV 267
            +K I E +RQL+    I+  Y  +      + N   VPR  + GGKA   Y  A  I K IT  G  V
Sbjct:  568 VKRIHEYKRQLLNCLHIITLYNRIKR----EPNRFMVPRTIMIGGKAAPGYHMAKMIIKLITAIGDVV 631
[Close]
BLAST of EY660263 vs. ExPASy Swiss-Prot
Match: PYGM_RABIT (Glycogen phosphorylase, muscle form OS=Oryctolagus cuniculus GN=PYGM PE=1 SV=3)

HSP 1 Score: 58.5362 bits (140), Expect = 3.377e-12
Identity = 27/61 (44.26%), Postives = 41/61 (67.21%), Query Frame = 3 
Query:  351 PASELSQHISTAWMEARATTDVKFAKNGCMVVGTLDGANGEIREQVGEDIFLLLCDRAYEI 533
            PA++LS+ ISTA  EA  T ++KF  NG + +GT+DGAN E+ E+ GE+ F +   R  ++
Sbjct:  659 PAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDV 719

HSP 2 Score: 34.2686 bits (77), Expect = 3.377e-12
Identity = 23/68 (33.82%), Postives = 32/68 (47.06%), Query Frame = 1 
Query:   64 LKSIFELERQLMTI*RIVDTYKEMLEMSAVKRNAKFVPRVCIFGGKAFASYVQANTIGKFITDGGATV 267
            +K I E +RQL+    ++  Y  + +    + N   VPR  + GGKA   Y  A  I K IT  G  V
Sbjct:  568 VKRIHEYKRQLLNCLHVITLYNRIKK----EPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVV 631
[Close]
BLAST of EY660263 vs. ExPASy Swiss-Prot
Match: PYGB_PONAB (Glycogen phosphorylase, brain form OS=Pongo abelii GN=PYGB PE=2 SV=3)

HSP 1 Score: 55.8398 bits (133), Expect = 5.692e-12
Identity = 27/53 (50.94%), Postives = 39/53 (73.58%), Query Frame = 3 
Query:  351 PASELSQHISTAWMEARATTDVKFAKNGCMVVGTLDGANGEIREQVG-EDIFL 506
            PA++LSQ ISTA  EA  T ++KF  NG + +GT+DGAN E+ E+ G E++F+
Sbjct:  659 PAADLSQQISTAGAEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGAENLFI 711

HSP 2 Score: 36.1946 bits (82), Expect = 5.692e-12
Identity = 24/68 (35.29%), Postives = 31/68 (45.59%), Query Frame = 1 
Query:   64 LKSIFELERQLMTI*RIVDTYKEMLEMSAVKRNAKFVPRVCIFGGKAFASYVQANTIGKFITDGGATV 267
            +K I E +RQL+    +V  Y  +    A      FVPR  + GGKA   Y  A  I K +T  G  V
Sbjct:  568 VKRIHEYKRQLLNCLHVVTLYNRIKRDPA----KAFVPRTVMIGGKAAPGYHMAKLIIKLVTSIGDVV 631
[Close]
BLAST of EY660263 vs. ExPASy Swiss-Prot
Match: PYGB_HUMAN (Glycogen phosphorylase, brain form OS=Homo sapiens GN=PYGB PE=1 SV=5)

HSP 1 Score: 55.8398 bits (133), Expect = 5.692e-12
Identity = 27/53 (50.94%), Postives = 39/53 (73.58%), Query Frame = 3 
Query:  351 PASELSQHISTAWMEARATTDVKFAKNGCMVVGTLDGANGEIREQVG-EDIFL 506
            PA++LSQ ISTA  EA  T ++KF  NG + +GT+DGAN E+ E+ G E++F+
Sbjct:  659 PAADLSQQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGAENLFI 711

HSP 2 Score: 36.1946 bits (82), Expect = 5.692e-12
Identity = 24/68 (35.29%), Postives = 31/68 (45.59%), Query Frame = 1 
Query:   64 LKSIFELERQLMTI*RIVDTYKEMLEMSAVKRNAKFVPRVCIFGGKAFASYVQANTIGKFITDGGATV 267
            +K I E +RQL+    +V  Y  +    A      FVPR  + GGKA   Y  A  I K +T  G  V
Sbjct:  568 VKRIHEYKRQLLNCLHVVTLYNRIKRDPA----KAFVPRTVMIGGKAAPGYHMAKLIIKLVTSIGDVV 631
[Close]
BLAST of EY660263 vs. ExPASy Swiss-Prot
Match: PYGM_MACFA (Glycogen phosphorylase, muscle form OS=Macaca fascicularis GN=PYGM PE=2 SV=3)

HSP 1 Score: 58.5362 bits (140), Expect = 5.693e-12
Identity = 27/61 (44.26%), Postives = 41/61 (67.21%), Query Frame = 3 
Query:  351 PASELSQHISTAWMEARATTDVKFAKNGCMVVGTLDGANGEIREQVGEDIFLLLCDRAYEI 533
            PA++LS+ ISTA  EA  T ++KF  NG + +GT+DGAN E+ E+ GE+ F +   R  ++
Sbjct:  659 PAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDV 719

HSP 2 Score: 33.4982 bits (75), Expect = 5.693e-12
Identity = 22/68 (32.35%), Postives = 32/68 (47.06%), Query Frame = 1 
Query:   64 LKSIFELERQLMTI*RIVDTYKEMLEMSAVKRNAKFVPRVCIFGGKAFASYVQANTIGKFITDGGATV 267
            +K I E +RQL+    ++  Y  +      + N  FVPR  + GGKA   +  A  I + IT  G  V
Sbjct:  568 VKRIHEYKRQLLNCLHVITLYNRIKR----EPNKFFVPRTVMIGGKAAPGHHMAKMIIRLITAIGDVV 631
The following BLAST results are available for this feature:
BLAST of EY660263 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
PYGL_MOUSE1.188e-1243.55Glycogen phosphorylase, liver form OS=Mus musculus... [more]
PYGL_RAT1.543e-1243.55Glycogen phosphorylase, liver form OS=Rattus norve... [more]
PYGL_HUMAN1.543e-1243.55Glycogen phosphorylase, liver form OS=Homo sapiens... [more]
PYGB_MOUSE1.543e-1244.26Glycogen phosphorylase, brain form OS=Mus musculus... [more]
PYGM_HUMAN2.004e-1244.26Glycogen phosphorylase, muscle form OS=Homo sapien... [more]
PYGM_MOUSE2.601e-1244.26Glycogen phosphorylase, muscle form OS=Mus musculu... [more]
PYGM_RABIT3.377e-1244.26Glycogen phosphorylase, muscle form OS=Oryctolagus... [more]
PYGB_PONAB5.692e-1250.94Glycogen phosphorylase, brain form OS=Pongo abelii... [more]
PYGB_HUMAN5.692e-1250.94Glycogen phosphorylase, brain form OS=Homo sapiens... [more]
PYGM_MACFA5.693e-1244.26Glycogen phosphorylase, muscle form OS=Macaca fasc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-020-C09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660263 ID=EY660263; Name=EY660263; organism=Citrus sinensis; type=EST; length=918bp
ACTGGTCGCCTGCGGTACTGGTCCGGAATTTTTTCAAAGACGGCGTGTCC
GATGACATCCTGTCTGAAGAGCATCTTTGAACTCGAGCGACAATTGATGA
CTATCTAGAGAATTGTTGACACATACAAAGAGATGTTAGAAATGAGTGCA
GTAAAAAGGAATGCCAAATTTGTACCAAGAGTTTGTATATTTGGAGGAAA
AGCCTTTGCTAGCTATGTGCAAGCCAATACAATTGGGAAATTTATTACGG
ATGGTGGGGCCACGGTCTGTCTTGGTCCTGAAGATAGGTGACTTATTGAA
GGGAATTTTTGTCCCTGATTACAATGTACGTGAGGCTGAATTGCTTATAG
CCTGCAAGTGAGCTCTCTCAACACATCAGTACTGCCTGGATGGAGGCTAG
AGCTACCACTGACGTGAAATTTGCAAAGAATGGTTGCATGGTGGTTGGAA
CCTTGGATGGTGCCAATGGTGAAATACGGGAACAGGTTGGAGAGGATATC
TTTTTACTATTATGTGACAGAGCCTACGAGATTGCAGGATAGTTATAACA
AAGATCTGAGGGGAAATTTGTTCCCTCACACCGATTTGAAGAATTGCACA
AATTTGCCAGATCAGGTGGTTTTGGGTGTTACTGCTATGATGAATCTATG
GGATCACTGGAACGAAATGAATGCTTTGGCCGTGCACATTATTGCCAACG
AGTGCACAGATTTTCCTAGCTACTTAGAATGCCAAGATAAAGTTTTTGAA
GCGTGTTGCCATCTAAATAGATGGACGAGAATGACGATCATGAACACATC
GTGCTCCTTGAAGATGAACACTAACAGAACGAGTCGGGATTGTGCCCGAA
CATATGGAACTTAATACCCGTGCAATTGCCGAGAACGTGTAATGGGTGTT
CCCAGTAACTGAGNTGGG
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