EY660262

Overview
NameEY660262
Unique NameEY660262
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13691 contig Csv1_Contig13691:88..992. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY660262 vs. ExPASy Swiss-Prot
Match: S15A4_RAT (Solute carrier family 15 member 4 OS=Rattus norvegicus GN=Slc15a4 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.188e-18
Identity = 66/254 (25.98%), Postives = 121/254 (47.64%), Query Frame = 3
Query:   27 TSPEVEEVKMVLKLLPIWAMCPLFWTVYSQM-TTFTVEQATFMNRKIGSFT-----VPSGXXXXXXXXXXXXXXXXNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQ------------ISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRS-----NLNKGKLNNFYWLLAVLGLLNFMVFLFFAMKH 719
            T  +VE+VK ++K++P++     +WTVY QM TT+ ++       +I S T     +P+                  +K+  P+ R+  H +   +SL+R+  G+ F   +   + ++E +R +   +K I             +  +W +PQY L+G  E F  +  LEF     P+ M+S   GLF     +G FV S L+++V  +    W+ S     N+N   L+ +++LLA +     ++FL  ++K+
Sbjct:  307 TEDKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLKIPEISSITTTHHTLPAAWLTMFDAVLILLLIPLKDKLVDPVLRR--HGLLP-SSLKRIAVGMFFVTCSAFAAGILESKRLDLVKEKTINQTIGGVVYHAADLPIWWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGIGSFVGSGLLALV-SLKAIGWMSSHTDFGNINSCHLHYYFFLLAAIQGATLLLFLIVSVKY 556          
BLAST of EY660262 vs. ExPASy Swiss-Prot
Match: S15A4_BOVIN (Solute carrier family 15 member 4 OS=Bos taurus GN=SLC15A4 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 6.367e-18
Identity = 66/253 (26.09%), Postives = 120/253 (47.43%), Query Frame = 3
Query:   36 EVEEVKMVLKLLPIWAMCPLFWTVYSQM-TTFTVEQATFMNRKIGSFTV-----PSGXXXXXXXXXXXXXXXXNEKVFVPLARKITHSIQGM--TSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQ------------ISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRS-----NLNKGKLNNFYWLLAVLGLLNFMVFLFFAMKH 719
            +VE+VK ++K++P++     +WTVY QM TT+ ++       +I S T      P+                  +K+  P+ ++      G+  +SL+R+  G+ F + +   + ++E +R +   +K I             +  +W VPQY L+G  E F  +  LEF     P+ M+S   GLF     +G FV S L+++V  +    W+ S     N+N   LN +++LLA +     ++FL  ++K+
Sbjct:  304 KVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLKIPEISSITTNPHTFPAAWLTMFDAVLILLLIPLKDKLVDPILKR-----NGLLPSSLKRIAVGMFFVMCSAFAAGILESKRLDLVKEKTINQTIGNVVYYAADLPIWWQVPQYVLIGVSEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSGLLALV-SLKAIGWMSSHTDFGNINGCYLNYYFFLLAAIQGATLLLFLIVSVKY 550          
BLAST of EY660262 vs. ExPASy Swiss-Prot
Match: S15A3_HUMAN (Solute carrier family 15 member 3 OS=Homo sapiens GN=SLC15A3 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.514e-14
Identity = 60/275 (21.82%), Postives = 119/275 (43.27%), Query Frame = 3
Query:    3 RQPTRPVSTSPEVEEVKMVLKLLPIWAMCPLFWTVYSQMTTFTVEQATFMN-----------------RKIGSFTVPSGXXXXXXXXXXXXXXXXNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQR------RETSVQKHIQI-------SAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLR-----SNLNKGKLNNFYWLLAVLGLLNFMVFLFFAMKHQ 722
            R P    S   ++   ++++K+LP+      +W VY QM +  V Q   ++                  +  S+T+P                   +++  PL  +        ++LQ++  G+ F   ++IV+ V+E +R       ET  Q+  ++       S +W +PQY L+G  E F  +  LEF   E P  M+    G+F     +G  + S LV+++       WL       N+N  +++ +++LLA +  +  ++F++ A +++
Sbjct:  295 RSPQPGASPQEDIANFQVLVKILPVMVTLVPYWMVYFQMQSTYVLQGLHLHIPNFFPANPANISVALRAQGSSYTIPEAWLLLANVVVVLILVPLKDRLIDPLLLRCKLL---PSALQKMALGMFFGFTSVIVAGVLEMERLHYIHHNETVSQQIGEVLYNAAPLSIWWQIPQYLLIGISEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLLGSSLVALLS--LPGGWLHCPKDFGNINNCRMDLYFFLLAGIQAVTALLFVWIAGRYE 564          
BLAST of EY660262 vs. ExPASy Swiss-Prot
Match: S15A3_RAT (Solute carrier family 15 member 3 OS=Rattus norvegicus GN=Slc15a3 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.374e-12
Identity = 61/279 (21.86%), Postives = 120/279 (43.01%), Query Frame = 3
Query:   24 STSPEVEEVKMVLKLLPIWAMCPLFWTVYSQMTTFTVEQATFMN-----RKIGSFTVPSGXXXXXXXXXXXXXXXXNEKVFVPLARKITHSIQGM--------TSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHI-------------QISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLR-----SNLNKGKLNNFYWLLAVLGLLNFMVFLFFAMKHQYNVQHRVKGDKELEN 767
            S   ++   +++LK+LP+      +W VY QM +  V Q   ++     R   + ++P                  N  V + L     H I  +        ++LQ++  G+ F   ++IV+ V+E++R +                     +S +W +PQY L+G  E F  +  LEF   E P  M+    G+F     +G  + S LV+++       W+       N+N  +++ +++LLA +  +  ++FL+ A +++     R + D + +N
Sbjct:  304 SPQEDMANFQVLLKVLPVMVTLVPYWMVYFQMQSTYVLQGLHLHIPNIFRTNPNISLPLRSDSSNYRIPEAWLLLANVAVILILVPVKDHLIDPLLLRCKLLPSALQKMALGMFFGFTSIIVAGVLEKERLQYIAANQTVPQLIGKDLYYAAPLSIWWQIPQYLLIGISEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLLGSGLVALLS--LPGGWMYCPKDFGNINNCRMDLYFFLLAGIQAVTAVLFLWIAGRYE-----RTRQDPDSQN 575          
The following BLAST results are available for this feature:
BLAST of EY660262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
S15A4_RAT2.188e-1825.98Solute carrier family 15 member 4 OS=Rattus norveg... [more]
S15A4_BOVIN6.367e-1826.09Solute carrier family 15 member 4 OS=Bos taurus GN... [more]
S15A3_HUMAN9.514e-1421.82Solute carrier family 15 member 3 OS=Homo sapiens ... [more]
S15A3_RAT1.374e-1221.86Solute carrier family 15 member 3 OS=Rattus norveg... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-020-C08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660262 ID=EY660262; Name=EY660262; organism=Citrus sinensis; type=EST; length=905bp
TGCGTCAACCCACGCGTCCGGTTTCTACCTCCCCTGAAGTTGAAGAAGTG
AAGATGGTGTTAAAGCTTCTCCCAATTTGGGCCATGTGTCCACTTTTCTG
GACAGTTTATTCACAAATGACTACATTCACTGTGGAGCAGGCAACCTTCA
TGAATCGAAAAATTGGCTCCTTTACTGTGCCTTCAGGTTCTTTATCAGCC
TTTCTATTCATAACCATCCTTCTCTTTACTTCACTAAACGAAAAAGTGTT
TGTTCCCCTGGCTCGAAAAATCACACACTCCATCCAAGGAATGACAAGCC
TTCAGAGGGTTGGCACTGGACTAATTTTTTCAGTGATTGCTATGATTGTT
TCTGCCGTTATTGAGCAGCAAAGGAGGGAAACTTCAGTTCAAAAGCACAT
CCAAATAAGTGCTTTCTGGCTAGTCCCTCAGTACTTTCTTGTCGGCGCAG
GCGAAGCTTTTGTTTATGTGGGACAACTTGAGTTCTTCATTAGGGAAGGG
CCAGAGAGGATGAAATCAATGAGCACAGGGCTGTTTCTAAGTGCCATTTC
AATGGGGATGTTTGTTAGCAGCATGTTGGTGTCTATTGTTGACAAAATAA
CCAATAAGCACTGGCTGAGAAGCAATTTGAATAAAGGGAAGTTAAACAAC
TTCTATTGGCTACTTGCAGTGCTAGGACTTTTGAATTTCATGGTGTTTCT
TTTCTTTGCAATGAAGCATCAGTATAATGTGCAGCATCGTGTTAAGGGAG
ATAAAGAGCTTGAGAATTTTCATGATGGGAAAGTTGAAGATTTGGAGAAC
AATTGGATTGCTGAGGGAAAAATGGAGCTCTAGTTGGGGTTTGCTTTTGA
GCTTAAAATGAAACATATATTCGCCAGTTGTATTTAGTTAATTTTAAGAA
TTCTT
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