EY660260

Overview
NameEY660260
Unique NameEY660260
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: DHH1_NEUCR (ATP-dependent RNA helicase dhh-1 OS=Neurospora crassa GN=dhh-1 PE=3 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 9.373e-26
Identity = 66/165 (40.00%), Postives = 91/165 (55.15%), Query Frame = 1
Query:  178 DARQFDARMNDLLGSDGQDFFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQ 672
            D RQ    + +  G D +DF    D              LL GI+  GFEKPS IQ+  I     G D++ +A++GTGKTA F    L +++  + + Q L+L PTRELA Q  +V + LG +LG+ V    GGT +R+D   L   VH+VVGTPGR+ D+  KQ
Sbjct:   31 DTRQQTEDVTNTRGLDWEDFIHDRD--------------LLMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALNKINPKVSKIQCLILVPTRELAMQTSQVCKTLGKHLGINVMVTTGGTGLRDDIVRLQDPVHIVVGTPGRILDLAGKQ 181          
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: DHH1_CANAL (ATP-dependent RNA helicase DHH1 OS=Candida albicans GN=DHH1 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.224e-25
Identity = 61/136 (44.85%), Postives = 87/136 (63.97%), Query Frame = 1
Query:  265 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQ 672
            +F+   L+  LL GI+  GFEKPS IQ+  I     G D++ +A++GTGKTA+F    LQ +   L + QAL+L PTRELA Q  +V+R LG ++G +     GGTS+R+D   L   VH++VGTPGRV D+  ++
Sbjct:   31 SFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPCLQLVKPKLNKVQALILVPTRELALQTSQVVRTLGKHVGTQCMVTTGGTSLRDDIVRLHDPVHILVGTPGRVLDLAARK 166          
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: DHH1_YEAST (ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae GN=DHH1 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.599e-25
Identity = 59/137 (43.07%), Postives = 88/137 (64.23%), Query Frame = 1
Query:  262 DTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQ 672
            +TF+   L+  LL GI+  GFEKPS IQ+  I     G D++ +A++GTGKTA F    L+++   L + QAL++ PTRELA Q  +V+R LG + G+      GGT++R+D   L+  VH++VGTPGRV D+  ++
Sbjct:   46 NTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRK 182          
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: DHH1_YEAS7 (ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae (strain YJM789) GN=DHH1 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.599e-25
Identity = 59/137 (43.07%), Postives = 88/137 (64.23%), Query Frame = 1
Query:  262 DTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQ 672
            +TF+   L+  LL GI+  GFEKPS IQ+  I     G D++ +A++GTGKTA F    L+++   L + QAL++ PTRELA Q  +V+R LG + G+      GGT++R+D   L+  VH++VGTPGRV D+  ++
Sbjct:   46 NTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRK 182          
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: DHH1_ASPTN (ATP-dependent RNA helicase dhh1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=dhh1 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.088e-25
Identity = 64/163 (39.26%), Postives = 95/163 (58.28%), Query Frame = 1
Query:  193 DARMNDLLGSDGQDFFTSYDEVYDT----FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRK 669
            DA+  D L +  +D     ++V  T    F+   ++  L+ GI+  GFEKPS IQ+  I     G D++ +A++GTGKTA F    L++++    + QAL+L PTRELA Q   V + LG +LG+ V    GGT + +D   L+  VH++VGTPGRV D+  K
Sbjct:   20 DAKWKDQLKTPAKDARPQTEDVTATKGLEFEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSHVCKTLGKHLGINVMVTTGGTGLMDDIIRLNDAVHILVGTPGRVLDLASK 182          
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: DHH1_CANGA (ATP-dependent RNA helicase DHH1 OS=Candida glabrata GN=DHH1 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.727e-25
Identity = 60/137 (43.80%), Postives = 88/137 (64.23%), Query Frame = 1
Query:  262 DTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQ 672
            ++F+   L+  LL GI+  GFEKPS IQ+  I     G D++ +A++GTGKTA F    L+++   L + QAL++ PTRELA Q  +V+R LG + GV      GGT++R+D   L+  VHV+VGTPGRV D+  ++
Sbjct:   31 NSFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKIKPKLNKIQALIMVPTRELALQTSQVIRTLGRHCGVSCMVTTGGTNLRDDILRLNETVHVLVGTPGRVLDLASRK 167          
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: DHH1_ASPOR (ATP-dependent RNA helicase dhh1 OS=Aspergillus oryzae GN=dhh1 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.727e-25
Identity = 64/163 (39.26%), Postives = 94/163 (57.67%), Query Frame = 1
Query:  193 DARMNDLLGSDGQDFFTSYDEVYDT----FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRK 669
            D R  D L +  +D     ++V  T    F+   ++  L+ GI+  GFEKPS IQ+  I     G D++ +A++GTGKTA F    L++++    + QAL+L PTRELA Q   V + LG +LG+ V    GGT + +D   L+  VH++VGTPGRV D+  K
Sbjct:   20 DTRWKDQLKAPAKDARPQTEDVTATKGLEFEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSHVCKTLGKHLGINVMVTTGGTGLMDDIIRLNDAVHILVGTPGRVLDLASK 182          
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: IF4A_ENCCU (ATP-dependent RNA helicase eIF4A OS=Encephalitozoon cuniculi GN=TIF1 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.562e-25
Identity = 65/149 (43.62%), Postives = 85/149 (57.05%), Query Frame = 1
Query:  241 TSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQSLRPD 687
            +S   ++DT++  GL+E+LL+GIY+ GFE PS IQ+  I P   G D+  QAQSGTGKT  F    LQ  D      Q LVLA TRE+A Q       LG ++G +V    GG+ +  D+  L    H+VVGTPGRV  M+    L  D
Sbjct:   31 SSQIRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKTGAFAVAALQICDMSQDVTQILVLASTREIAAQNAARFEDLGCFMGARVALLSGGSPIAADKVALEKKPHIVVGTPGRVEHMININELSMD 179          
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: DHH1_KLULA (ATP-dependent RNA helicase DHH1 OS=Kluyveromyces lactis GN=DHH1 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.562e-25
Identity = 61/145 (42.07%), Postives = 91/145 (62.76%), Query Frame = 1
Query:  250 DEVYDT----FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQ 672
            D+V +T    F+   L+  LL GI+  GFEKPS IQ+  I     G D++ +A++GTGKTA F    L+++   L + QAL++ PTRELA Q  +V+R LG + G+      GGT++R+D   L+  VH++VGTPGRV D+  ++
Sbjct:   28 DDVLNTKGRSFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAIAGKDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDIMRLNEPVHILVGTPGRVLDLASRR 172          
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: DHH1_BOTFB (ATP-dependent RNA helicase dhh1 OS=Botryotinia fuckeliana (strain B05.10) GN=dhh1 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.562e-25
Identity = 56/134 (41.79%), Postives = 84/134 (62.69%), Query Frame = 1
Query:  268 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRK 669
            F+   ++  LL GI+  G+EKPS IQ+  I     G D++ +A++GTGKTA F    L++++    + Q L+L PTRELA Q  +V + LG +LG+ V    GGT++R+D   L   VH++VGTPGR+ D+  K
Sbjct:   49 FEDFSIKRELLMGIFEMGYEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALERINPKNTKVQCLILVPTRELALQTSQVCKTLGQHLGINVMVTTGGTTLRDDILRLQEPVHIIVGTPGRILDLAGK 182          
The following BLAST results are available for this feature:
BLAST of EY660260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DHH1_NEUCR9.373e-2640.00ATP-dependent RNA helicase dhh-1 OS=Neurospora cra... [more]
DHH1_CANAL1.224e-2544.85ATP-dependent RNA helicase DHH1 OS=Candida albican... [more]
DHH1_YEAST1.599e-2543.07ATP-dependent RNA helicase DHH1 OS=Saccharomyces c... [more]
DHH1_YEAS71.599e-2543.07ATP-dependent RNA helicase DHH1 OS=Saccharomyces c... [more]
DHH1_ASPTN2.088e-2539.26ATP-dependent RNA helicase dhh1 OS=Aspergillus ter... [more]
DHH1_CANGA2.727e-2543.80ATP-dependent RNA helicase DHH1 OS=Candida glabrat... [more]
DHH1_ASPOR2.727e-2539.26ATP-dependent RNA helicase dhh1 OS=Aspergillus ory... [more]
IF4A_ENCCU3.562e-2543.62ATP-dependent RNA helicase eIF4A OS=Encephalitozoo... [more]
DHH1_KLULA3.562e-2542.07ATP-dependent RNA helicase DHH1 OS=Kluyveromyces l... [more]
DHH1_BOTFB3.562e-2541.79ATP-dependent RNA helicase dhh1 OS=Botryotinia fuc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-020-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660260 ID=EY660260; Name=EY660260; organism=Citrus sinensis; type=EST; length=703bp
TTCCTCAACCCACGCGTCCGTGAACTCCGTCTCCTCAAAGCAAACAACTA
AACTCAGAGATCCGAGGAGTTCGGGGAAAACCCTATTCCACCCCCTAGTC
TTTAAAATCAAACAAGCTTCCACCTTTCATCATCATCACTATCAGTCATG
GCTGGTTTGGCTGAAGGATCCCAGTTTGATGCCCGTCAATTTGATGCTAG
AATGAATGATTTACTTGGAAGTGATGGACAAGATTTCTTCACATCGTATG
ATGAGGTTTATGATACTTTTGATGCTATGGGATTGCAAGAGAATCTTCTT
AGAGGCATTTATGCATATGGTTTTGAGAAGCCTTCTGCCATTCAGCAAAG
GGGGATTGTTCCATTCTGCAAGGGACTTGATGTAATTCAACAAGCACAGT
CTGGAACTGGAAAAACTGCAACTTTTTGCTCCGGAATTTTGCAGCAGCTT
GATTATGGTTTAGTTGAATGCCAAGCATTGGTTCTTGCTCCAACTAGGGA
ACTGGCGCAACAGATTGAGAAGGTTATGCGAGCACTTGGTGACTATCTTG
GTGTCAAAGTGCATGCATGTGTAGGTGGAACCAGTGTCCGTGAAGATCAA
CGCATTCTTTCAAGCGGTGTACATGTTGTAGTTGGTACACCTGGTCGTGT
GTTTGACATGTTGCGGAAGCAATCTCTTCGCCCAGATACATCANGATCTT
TGT
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