EY660260
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: PRP28_SCHPO (Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Schizosaccharomyces pombe GN=prp28 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14 Identity = 49/143 (34.27%), Postives = 78/143 (54.55%), Query Frame = 1 Query: 268 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY--GLVECQ------ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQ 672 ++ GL +L+ + +++PS+IQ+ I + D+I A++G+GKTA F ++ + L E A+VLAPTRELAQQI+ + LG + + VGG + E +S G H+VV TPGR+ D L ++ Sbjct: 251 WEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLIGIAETGSGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQVEGNKFAEPLGFRCVSVVGGHAFEEQSFQMSQGAHIVVATPGRLLDCLERR 393
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: HAS1_DEBHA (ATP-dependent RNA helicase HAS1 OS=Debaryomyces hansenii GN=HAS1 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14 Identity = 51/144 (35.42%), Postives = 76/144 (52.78%), Query Frame = 1 Query: 250 DEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL-----VECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLR 666 D V D F+ GL E L+ I GF K + +Q + I P G DV+ A++G+GKT F ++ L Y L +V++PTRELA QI V R L + +GG + R++ L GV++++ TPGR+ D L+ Sbjct: 100 DIVTDNFEEAGLSEPTLKAIKDMGFSKMTQVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEML-YSLRFKPRNGTGVVVVSPTRELALQIFGVARELMAHHSQTFGIVIGGANRRQEAEKLMKGVNLLIATPGRLLDHLQ 242
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: HAS1_COCIM (ATP-dependent RNA helicase HAS1 OS=Coccidioides immitis GN=HAS1 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14 Identity = 48/137 (35.04%), Postives = 75/137 (54.74%), Query Frame = 1 Query: 268 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLR 666 F + L E L+ I GFE + IQ+RGI P G DV+ A++G+GKT +F ++ L + + +V++PTRELA QI V R L + +GG + R + L+ GV++++ TPGR+ D L+ Sbjct: 126 FTELNLSEKTLKAIQEMGFETMTEIQRRGIPPLMAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKPRNGTGVIVVSPTRELALQIFGVARELMAHHSQTYGIVIGGANRRAEAEKLTKGVNLLIATPGRLLDHLQ 262
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: HAS1_ASPCL (ATP-dependent RNA helicase has1 OS=Aspergillus clavatus GN=has1 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14 Identity = 56/162 (34.57%), Postives = 81/162 (50.00%), Query Frame = 1 Query: 193 DARMNDLLGSDGQDFFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLR 666 DA DL D T D F +GL E L+ I GFE + IQ+R I P G DV+ A++G+GKT +F ++ L + + LV++PTRELA QI V R L + +GG + R + L GV++++ TPGR+ D L+ Sbjct: 121 DAEAADLPSMDAVRLPT-VDGEPQKFTELGLSEKTLKAINEMGFETMTEIQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKPRNGTGVLVVSPTRELALQIFGVARELCQHHSQTYGIVIGGANRRAEAEKLMKGVNLLIATPGRLLDHLQ 281
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: DBP8_SCHPO (ATP-dependent RNA helicase dbp8 OS=Schizosaccharomyces pombe GN=dbp8 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14 Identity = 49/134 (36.57%), Postives = 73/134 (54.48%), Query Frame = 1 Query: 265 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLR 666 +F +G+ L+ + A +P+ IQ+ I +G + I A++G+GKTA F I+++ AL+L PTRELA QI++ ALG L +K VGG + LS HVVV TPGR+ D++R Sbjct: 8 SFSDLGISPWLIDTLKALAIYEPTDIQEGVIAQILEGRNCIGGAKTGSGKTAAFALPIIEKWSKDPSGIFALILTPTRELAIQIDEQFAALGANLNLKHALIVGGMDMIRQSIDLSKRPHVVVATPGRLADLIR 141
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: DBP4_ASPCL (ATP-dependent RNA helicase dbp4 OS=Aspergillus clavatus GN=dbp4 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14 Identity = 53/147 (36.05%), Postives = 83/147 (56.46%), Query Frame = 1 Query: 253 EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQSL 678 E +++F + L E L G+ + F+ + IQ R I KG DV+ A++G+GKT F +L+ L Y + AL+L+PTRELA QI +V+R +G Y +GG S+RE+Q L ++++V TPGR+ L + +L Sbjct: 46 ESFESFSDLPLSEPTLSGLTSSHFKTLTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPVLENL-YRRQWAEHDGLGALILSPTRELAIQIFEVLRKIGRYHTFSAGLVIGGKSLREEQERLGR-MNILVCTPGRMLQHLDQTAL 190
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: RHLB_TOLAT (ATP-dependent RNA helicase rhlB OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=rhlB PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14 Identity = 47/142 (33.10%), Postives = 72/142 (50.70%), Query Frame = 1 Query: 265 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-------DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRK 669 TF +GL+ +L G+ A GF + IQ I G ++ QAQ+GTGKT F +G L + + + L++APTRELA QI + + G K+ GG + +L GV +++GT GR+ D L++ Sbjct: 10 TFAELGLEPQVLAGVEAKGFHNCTPIQAETIPLLLTGKNIAGQAQTGTGKTIAFLAGTFNYLLTHSASAERRQNQPRVLIMAPTRELAVQIYNDAVPMSESCGFKMGLAYGGDGYDKQLAVLQEGVDLLIGTTGRIIDYLKQ 151
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: RH39_ORYSJ (DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica GN=Os01g0184500 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14 Identity = 45/147 (30.61%), Postives = 80/147 (54.42%), Query Frame = 1 Query: 253 EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL--DYGLVEC-------QALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLR 666 EV D+F+ +GL E ++ + G KP+ IQ G+ G V+ + +G+GKT + ++Q L D ++ +A+VL PTREL +Q+ +V +++ + + GG+ +R + L+ V +VVGTPGR+ D ++ Sbjct: 107 EVVDSFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKTLAYLLPLVQLLRRDEAMLGMSMKPRRPRAVVLCPTRELTEQVFRVAKSISHHARFRSTMVSGGSRIRPQEDSLNMPVDMVVGTPGRILDHIK 253
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: PRP28_PICGU (Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Pichia guilliermondii GN=PRP28 PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14 Identity = 52/144 (36.11%), Postives = 70/144 (48.61%), Query Frame = 1 Query: 280 GLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-----DYGLVECQ---------ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRK 669 G+ LL I G+++P+ IQ+ I DV+ A++G+GKT F +L L DY VE + LVLAPTRELA QI K + LG V +GG E + + G H+VV TPGR+ D K Sbjct: 156 GIPTTLLNTIDQLGYKEPTPIQRAAIPTALGHRDVVGIAETGSGKTLAFLIPLLSYLSAIDKDYMEVEHKQESNLNKVLGLVLAPTRELALQISKEAKKFASVLGYNVVTIIGGHQYEETVKSVQDGAHIVVATPGRLIDSAEK 299
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: PRP28_COCIM (Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Coccidioides immitis GN=PRP28 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14 Identity = 53/143 (37.06%), Postives = 77/143 (53.85%), Query Frame = 1 Query: 280 GLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY--GLVECQ--------ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQSL 678 GL + LL I G++ PS IQ+ I + D+I A +G+GKTA F +L + L E + A++LAPTRELAQQIE R + LG V + VGG S+ E L +G +++ TPGR+ D + ++ L Sbjct: 383 GLPKRLLEIIDKVGYKDPSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAIILAPTRELAQQIENEARKFCNPLGFNVVSIVGGHSLEEQSFSLRNGAEIIIATPGRLVDCIERRIL 525 The following BLAST results are available for this feature:
BLAST of EY660260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660260 ID=EY660260; Name=EY660260; organism=Citrus sinensis; type=EST; length=703bpback to top |