EY660260
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: IF4A_KLULA (ATP-dependent RNA helicase eIF4A OS=Kluyveromyces lactis GN=TIF1 PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.078e-41 Identity = 83/155 (53.55%), Postives = 110/155 (70.97%), Query Frame = 1 Query: 223 DGQDFFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQSLRPD 687 D ++YD+V +FD + L+E LLRGI+ YGF +PSAIQQR I+P +G DV+ QAQSGTGKT TF LQ +D + Q L+LAPTRELA QI+KV+ AL ++ VKVHAC+GGTS++ED L G ++VGTPGRVFDM+ ++ + D Sbjct: 9 DENQIQSTYDKVVYSFDDLKLKEELLRGIFGYGFVEPSAIQQRAILPIIEGKDVLAQAQSGTGKTGTFSIAALQNIDEKIKAPQGLILAPTRELALQIQKVVMALAIHMDVKVHACIGGTSLQEDSEALRGGAQIIVGTPGRVFDMIDRRIFKTD 163
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: FAL1_YARLI (ATP-dependent RNA helicase FAL1 OS=Yarrowia lipolytica GN=FAL1 PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 6.047e-41 Identity = 91/166 (54.82%), Postives = 116/166 (69.88%), Query Frame = 1 Query: 187 QFDARMNDLLGSDGQDFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQSLR 681 +FD ++D L +F TS D +V TF++M L+++LLRGIYAYGFE PSAIQ R I KG D I QAQSGTGKTATF +L+ +D E QA+VL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGTS+ D + L +G VV GTPGR DM++K LR Sbjct: 3 EFDRDLDDEL-----EFKTSKDVDVTPTFESMDLKDDLLRGIYAYGFEAPSAIQSRAITQIIKGRDTIAQAQSGTGKTATFSISMLEVIDTKHRETQAMVLSPTRELATQIQSVILALGDYMNVQCHACIGGTSLSVDMKKLEAGQQVVSGTPGRCLDMIKKGCLR 163
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: IF4A_LODEL (ATP-dependent RNA helicase eIF4A OS=Lodderomyces elongisporus GN=TIF1 PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.347e-40 Identity = 82/149 (55.03%), Postives = 107/149 (71.81%), Query Frame = 1 Query: 241 TSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQSLRPD 687 ++YD V FD + L+ N++RGI+ YG+E PSAIQQR I+P +G DV+ QAQSGTGKTATF LQ++D QAL+LAPTRELA QI+ V+ ++G YL V VHA +GGTS+ +D SGV +VVGTPGRVFDM+ ++ R D Sbjct: 16 SNYDNVVYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRIDENEKSTQALILAPTRELALQIKNVITSIGLYLNVTVHASIGGTSMSDDIEAFKSGVQIVVGTPGRVFDMIERRYFRTD 164
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: FAL1_DEBHA (ATP-dependent RNA helicase FAL1 OS=Debaryomyces hansenii GN=FAL1 PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.347e-40 Identity = 80/142 (56.34%), Postives = 106/142 (74.65%), Query Frame = 1 Query: 253 EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQSL 678 +V+ TF++M L+ +LL+GIY YGFE PSAIQ R I+ G D I QAQSGTGKTATF G+L+ +D +CQAL+L+PTRELAQQI+ V++ LGDY+ V HAC+GGT V ED + L G +V GTPGRV DM+++++L Sbjct: 23 KVHATFESMNLKTDLLKGIYGYGFEAPSAIQSRAIMQIISGKDTIAQAQSGTGKTATFSIGMLEVIDTKSKDCQALILSPTRELAQQIQSVVKHLGDYMNVHTHACIGGTHVGEDIKKLQQGQQIVSGTPGRVVDMIKRRNL 164
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: IF4A_PICST (ATP-dependent RNA helicase eIF4A OS=Pichia stipitis GN=TIF1 PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.759e-40 Identity = 82/149 (55.03%), Postives = 108/149 (72.48%), Query Frame = 1 Query: 241 TSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQSLRPD 687 T+YD V FD + L+ N++RGI+ YG+E PSAIQQR I+P +G DV+ QAQSGTGKTATF LQ++D QAL+LAPTRELA QI+ V+ ++G YL V VHA +GGTS+++D SGV VVVGTPGRVFDM+ ++ + + Sbjct: 16 TNYDNVVYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRIDENEKSTQALILAPTRELALQIKNVITSIGLYLNVTVHASIGGTSMQDDIEAFRSGVQVVVGTPGRVFDMIERRYFKTE 164
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: FAL1_PICST (ATP-dependent RNA helicase FAL1 OS=Pichia stipitis GN=FAL1 PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.298e-40 Identity = 79/142 (55.63%), Postives = 104/142 (73.24%), Query Frame = 1 Query: 253 EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQSL 678 +V+ TF++M L+ +LL+GIY YGFE PSAIQ R I+ G D I QAQSGTGKTATF G+LQ +D +CQAL+L+PTRELA QI+ V++ LGDY+ + HAC+GGT V +D + L G +V GTPGRV DM+++Q L Sbjct: 23 KVHATFESMNLKPDLLKGIYGYGFEAPSAIQSRAIMQIINGRDTIAQAQSGTGKTATFSIGMLQAIDTNAKDCQALILSPTRELAVQIQNVVKHLGDYMNIHTHACIGGTHVGDDIKKLKQGQQIVSGTPGRVVDMVKRQQL 164
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: IF4A_YEAST (ATP-dependent RNA helicase eIF4A OS=Saccharomyces cerevisiae GN=TIF1 PE=1 SV=3) HSP 1 Score: 165.236 bits (417), Expect = 3.001e-40 Identity = 85/149 (57.05%), Postives = 108/149 (72.48%), Query Frame = 1 Query: 241 TSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQSLRPD 687 T+YD+V FD M L ENLLRG++ YGFE+PSAIQQR I+P +G DV+ QAQSGTGKT TF LQ++D + QAL+LAPTRELA QI+KV+ AL ++ +KVHAC+GGTS ED L +VVGTPGRVFD ++++ R D Sbjct: 15 TNYDKVVYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEGLRD-AQIVVGTPGRVFDNIQRRRFRTD 162
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: IF4A_YEAS7 (ATP-dependent RNA helicase eIF4A OS=Saccharomyces cerevisiae (strain YJM789) GN=TIF1 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.001e-40 Identity = 85/149 (57.05%), Postives = 108/149 (72.48%), Query Frame = 1 Query: 241 TSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQSLRPD 687 T+YD+V FD M L ENLLRG++ YGFE+PSAIQQR I+P +G DV+ QAQSGTGKT TF LQ++D + QAL+LAPTRELA QI+KV+ AL ++ +KVHAC+GGTS ED L +VVGTPGRVFD ++++ R D Sbjct: 15 TNYDKVVYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEGLRD-AQIVVGTPGRVFDNIQRRRFRTD 162
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: IF4A_CANGA (ATP-dependent RNA helicase eIF4A OS=Candida glabrata GN=TIF1 PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.920e-40 Identity = 85/155 (54.84%), Postives = 108/155 (69.68%), Query Frame = 1 Query: 223 DGQDFFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQSLRPD 687 D T+YD+V FD M L E LLRG++ YGF KPSAIQQR I+P +G DV+ QAQSGTGKT TF LQ++D + QAL+LAPTRELA QI+KV+ ALG ++ +KVHAC+GGTS ED L +VVGTPGRVFD ++++ + D Sbjct: 10 DESQIETNYDKVVYEFDDMNLNEKLLRGVFGYGFNKPSAIQQRAIMPIIEGNDVLAQAQSGTGKTGTFSIAALQRIDPAIKAPQALMLAPTRELALQIQKVVMALGFHMDIKVHACIGGTSFVEDAEGLRD-AQIVVGTPGRVFDNIQRRKFKVD 163
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: RH2_ARATH (DEAD-box ATP-dependent RNA helicase 2 OS=Arabidopsis thaliana GN=RH2 PE=2 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 5.119e-40 Identity = 80/143 (55.94%), Postives = 106/143 (74.13%), Query Frame = 1 Query: 253 EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQSLR 681 E +F+ MG++E++LRG+Y YGFEKPSAIQQR ++P +G DVI QAQSGTGKT+ + Q +D E QAL+L+PTRELA Q EK ++A+G + ++ HAC+GG SV ED R L GVHVV GTPGRV DM++++SLR Sbjct: 32 EPITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVCQVVDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAHACIGGNSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRSLR 174 The following BLAST results are available for this feature:
BLAST of EY660260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660260 ID=EY660260; Name=EY660260; organism=Citrus sinensis; type=EST; length=703bpback to top |