EY660252

Overview
NameEY660252
Unique NameEY660252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR_ANASP (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Anabaena sp. (strain PCC 7120) GN=dxr PE=3 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.353e-65
Identity = 119/191 (62.30%), Postives = 157/191 (82.20%), Query Frame = 3
Query:  246 KPISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEVALRRIILTASGGAFRDWPVRNMKNLS 818
            K I+++GSTGSIGTQTLDIV+++ D+F +V LAAGSN+ +LA+Q+++F+PQ+ A+     L  ++ A+ +++ +P +L GE GVIE AR+ DA TVVTGIVGCAGL PT+AAIEAGKDIALANKETLIAGGP VLPL  KH +K+LPADSEHSAIFQC+QG+P+  L++I+LTASGGAFRDW V  +  ++
Sbjct:    3 KSITLVGSTGSIGTQTLDIVSQYPDQFRIVGLAAGSNVEMLAEQIRQFRPQIAAISAAEKLPALQAAIKDLDPQPILLGGEAGVIEVARYGDAETVVTGIVGCAGLLPTIAAIEAGKDIALANKETLIAGGPVVLPLVEKHGVKLLPADSEHSAIFQCLQGVPKGGLKKILLTASGGAFRDWDVERLAEVT 193          
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR_CYAP4 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dxr PE=3 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 1.146e-64
Identity = 120/184 (65.22%), Postives = 154/184 (83.70%), Query Frame = 3
Query:  246 KPISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEVALRRIILTASGGAFRDWPV 797
            K I++LGSTGSIGTQTLDIVA++ D+F +V LAAG ++  L  Q+++F+PQ+VA+ +E  LD++K A+A+++ +P ++AG  GV E A + DA TVVTGIVGCAGL PT+AAI+AGKDIALANKETLIAGGP VLPL  ++ +K+LPADSEHSAIFQC+QG+P   LRRI+LTASGGAFRDWPV
Sbjct:    2 KAITLLGSTGSIGTQTLDIVAQYPDQFRIVGLAAGRSLDKLIPQIRQFRPQIVALADEQQLDDLKAAIADLDPQPILVAGPAGVCEVAAYGDAKTVVTGIVGCAGLLPTIAAIKAGKDIALANKETLIAGGPVVLPLVEQYGVKLLPADSEHSAIFQCLQGVPAGGLRRILLTASGGAFRDWPV 185          
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR_THEEB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Thermosynechococcus elongatus (strain BP-1) GN=dxr PE=3 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.954e-64
Identity = 118/191 (61.78%), Postives = 156/191 (81.68%), Query Frame = 3
Query:  246 KPISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEVALRRIILTASGGAFRDWPVRNMKNLS 818
            K +++LGSTGSIGTQTLDIVA++ D+F VV LAAG N+  L  Q+++F+P++V++ +   L E++ ALA++ +KP+++AGE G+   A + DA  VVTGIVGCAGL PT+AAI+AGKDIALANKETLIAGGP VLPL  ++ +K+LPADSEHSAIFQC+QG+PE  LR+IILTASGGAFRDWPV  +  ++
Sbjct:   20 KALNLLGSTGSIGTQTLDIVAQYPDRFRVVGLAAGRNLERLIPQIRQFQPEIVSIADPEQLPELEAALADLPQKPQLVAGEAGIAAVAAYGDAEVVVTGIVGCAGLVPTIAAIKAGKDIALANKETLIAGGPVVLPLLQEYGVKLLPADSEHSAIFQCLQGVPEGGLRKIILTASGGAFRDWPVEKLAQVT 210          
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR_SYNY3 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechocystis sp. (strain PCC 6803) GN=dxr PE=3 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 3.333e-64
Identity = 125/188 (66.49%), Postives = 149/188 (79.26%), Query Frame = 3
Query:  246 KPISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEE-KPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEVALRRIILTASGGAFRDWPVRNM 806
            K IS+LGSTGSIGTQTLDIV  H D F VV LAAG N+ LLA QV  F+P++VA+R    L+++K A+A + + +P  + GE+GV+E AR+ DA +VVTGIVGCAGL PT+AAI AGKDIALANKETLIAG P VLPL  K  +K+LPADSEHSAIFQC+QG+PE  LRRIILTASGGAFRD PV  +
Sbjct:    3 KRISILGSTGSIGTQTLDIVTHHPDAFQVVGLAAGGNVALLAQQVAEFRPEIVAIRQAEKLEDLKAAVAELTDYQPMYVVGEEGVVEVARYGDAESVVTGIVGCAGLLPTMAAIAAGKDIALANKETLIAGAPVVLPLVEKMGVKLLPADSEHSAIFQCLQGVPEGGLRRIILTASGGAFRDLPVERL 190          
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR_SYNJA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain JA-3-3Ab) GN=dxr PE=3 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.654e-63
Identity = 116/189 (61.38%), Postives = 151/189 (79.89%), Query Frame = 3
Query:  252 ISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEVALRRIILTASGGAFRDWPVRNMKNLS 818
            I++LGSTGSIGTQTLD+VA++ ++F VV L + SN+TLLA+QV RF+PQ+VA+  E LL E++  L  +   PE++AG +G+ + A HP A  VVTGIVGCAGL PT+AAI AGKDIALANKETL+AGGP VLPL  ++ +K++P DSEHSAIFQC+QG+P  +LRRI+LTASGGAFRDWP   +  ++
Sbjct:    4 ITLLGSTGSIGTQTLDLVAQYPERFRVVGLTSYSNVTLLAEQVWRFRPQIVAIGREELLPELRSLLTGMRPLPELVAGTEGLCQVAAHPAAQRVVTGIVGCAGLLPTLAAIRAGKDIALANKETLVAGGPVVLPLVREYGVKLIPVDSEHSAIFQCLQGVPPGSLRRILLTASGGAFRDWPAEKLDQVT 192          
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR_SYNJB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. GN=dxr PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 6.287e-63
Identity = 114/189 (60.32%), Postives = 150/189 (79.37%), Query Frame = 3
Query:  252 ISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEVALRRIILTASGGAFRDWPVRNMKNLS 818
            I++LGSTGSIGTQTLD+VA++ ++F VV L + SN+ LLA+QV+RF+PQ+VA+  E LL E++  L  +   PE++AG +G+ + A HP A  VVTGIVGCAGL PT+AAI AGKDIALANKETL+AGGP VLPL  ++ + ++P DSEHSAIFQC+QG+P  +LRRI+LTASGGAFRDWP   +  ++
Sbjct:    4 ITLLGSTGSIGTQTLDLVAQYPERFQVVGLTSYSNVALLAEQVRRFRPQMVAIGREELLPELRSLLTGIRPLPELVAGTEGLCQVAAHPAAQRVVTGIVGCAGLLPTLAAIRAGKDIALANKETLVAGGPVVLPLVREYGVNLIPVDSEHSAIFQCLQGVPAGSLRRILLTASGGAFRDWPAEKLDQVT 192          
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR_SYNP6 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dxr PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.401e-62
Identity = 121/201 (60.20%), Postives = 154/201 (76.62%), Query Frame = 3
Query:  246 KPISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEVA----------LRRIILTASGGAFRDWPVRNMKNLS 818
            K +++LGSTGSIGTQTLDI+ ++ D+F +V LAAG N+ LL++Q++R +P++VA+++ + L E++ A+A+++  P IL GE GV E AR+ DA  VVTGIVGCAGL PT+AAIEAGKDIALANKETLIA GP VLPL  KH + I PADSEHSAIFQCIQGL   A          LRRI+LTASGGAFRDWPV  +  ++
Sbjct:    2 KAVTLLGSTGSIGTQTLDILEQYPDRFRLVGLAAGRNVALLSEQIRRHRPEIVAIQDAAQLSELQAAIADLDNPPLILTGEAGVTEVARYGDAEIVVTGIVGCAGLLPTIAAIEAGKDIALANKETLIAAGPVVLPLLQKHGVTITPADSEHSAIFQCIQGLSTHADFRPAQVVAGLRRILLTASGGAFRDWPVERLSQVT 202          
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR_SYNE7 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus elongatus (strain PCC 7942) GN=dxr PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.401e-62
Identity = 121/201 (60.20%), Postives = 154/201 (76.62%), Query Frame = 3
Query:  246 KPISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEVA----------LRRIILTASGGAFRDWPVRNMKNLS 818
            K +++LGSTGSIGTQTLDI+ ++ D+F +V LAAG N+ LL++Q++R +P++VA+++ + L E++ A+A+++  P IL GE GV E AR+ DA  VVTGIVGCAGL PT+AAIEAGKDIALANKETLIA GP VLPL  KH + I PADSEHSAIFQCIQGL   A          LRRI+LTASGGAFRDWPV  +  ++
Sbjct:    2 KAVTLLGSTGSIGTQTLDILEQYPDRFRLVGLAAGRNVALLSEQIRRHRPEIVAIQDAAQLSELQAAIADLDNPPLILTGEAGVTEVARYGDAEIVVTGIVGCAGLLPTIAAIEAGKDIALANKETLIAAGPVVLPLLQKHGVTITPADSEHSAIFQCIQGLSTHADFRPAQVVAGLRRILLTASGGAFRDWPVERLSQVT 202          
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR_GLOVI (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Gloeobacter violaceus GN=dxr PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.472e-59
Identity = 112/187 (59.89%), Postives = 143/187 (76.47%), Query Frame = 3
Query:  246 KPISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEVALRRIILTASGGAFRDWPVRNM 806
            K I++LGSTGSIGTQTLDIVAE+ ++F V  + A SN+ LLA+Q++RF+PQVVAV +E+    +   LA  +  PE+  GE+G    A    A  VVTGIVGCAGL PT+AA++AG+D+ALANKETL+AGGP V+P      +K+LP DSEHSAIFQC+QG+PE AL+RI+LTASGGAFRDWPV  +
Sbjct:    2 KHIALLGSTGSIGTQTLDIVAEYPERFAVTGMTAHSNMELLAEQIRRFRPQVVAVGSEARRAALAALLAGFDGMPEMFVGEKGCCTVASQAPAEVVVTGIVGCAGLMPTLAAVDAGRDLALANKETLVAGGPVVMPRIRARGVKLLPVDSEHSAIFQCLQGVPEGALKRILLTASGGAFRDWPVEKL 188          
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR_PROM9 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain MIT 9312) GN=dxr PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 6.089e-58
Identity = 117/205 (57.07%), Postives = 152/205 (74.15%), Query Frame = 3
Query:  246 KPISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVE--EKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEV------------ALRRIILTASGGAFRDWPVRNMKNLS 818
            K I+VLGSTGSIGTQTL+I +E  DKF  VAL+AG NITLL +QVK  KP+VVA+ +E+L++++K+ + N++    P +L G++G+   A    A TV+TGIVGCAGL PT++AI AGK+IALANKETLIA GP V+P   K+N ++LPADSEHSAIFQC+QGLP               L+ I LTASGGAFRDWPV N+K+++
Sbjct:    2 KYITVLGSTGSIGTQTLEIASEQPDKFKAVALSAGRNITLLTEQVKTHKPEVVAIEDENLIEDLKDNINNLDLDSAPLVLGGKEGINAVAAWDKADTVITGIVGCAGLIPTMSAINAGKNIALANKETLIAAGPIVIPALKKNNSRLLPADSEHSAIFQCLQGLPNYENADFSTGVMPKGLKAIHLTASGGAFRDWPVENLKHVT 206          
The following BLAST results are available for this feature:
BLAST of EY660252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 441
Match NameE-valueIdentityDescription
DXR_ANASP1.353e-6562.301-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_CYAP41.146e-6465.221-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_THEEB1.954e-6461.781-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_SYNY33.333e-6466.491-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_SYNJA1.654e-6361.381-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_SYNJB6.287e-6360.321-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_SYNP61.401e-6260.201-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_SYNE71.401e-6260.201-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_GLOVI2.472e-5959.891-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_PROM96.089e-5857.071-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-020-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660252 ID=EY660252; Name=EY660252; organism=Citrus sinensis; type=EST; length=889bp
TTCCAAGACCCACGTGTCCGGGCATTGATGTCAAAAACCCAGCTGAAATC
AAGGCTCTCTCTTTCTTGGAGACAACCAGGTCATATCACCCCCTCCCCAA
GCTCTCAGGTGGGTTTCCTTTGAAGAGGAAGGATAATGCAACGGCGACGT
TTGGTAGAATAGTTCAATGTTCTGCTCAGGGACCTCCTCCTGCATGGCCA
GGCCGAGCTGTTACAGAGACTTTTCGTAAGACTTGGGATGGTCCAAAGCC
AATCTCAGTGCTTGGGTCAACTGGTTCTATTGGAACTCAGACGTTGGACA
TAGTTGCGGAGCATGAAGATAAATTCATAGTTGTGGCACTGGCAGCTGGT
TCAAATATAACTCTTCTTGCTGATCAGGTGAAGAGATTCAAACCTCAAGT
AGTTGCTGTTAGAAATGAGTCATTACTTGATGAAATCAAGGAGGCTTTGG
CTAATGTTGAAGAAAAGCCCGAGATTTTGGCCGGGGAACAGGGAGTCATT
GAGGCTGCCCGACACCCAGATGCTGTCACCGTGGTGACAGGTATAGTCGG
TTGTGCAGGATTAAAGCCTACAGTTGCTGCGATAGAAGCAGGAAAAGATA
TAGCTTTGGCCAATAAGGAGACATTGATTGCTGGTGGTCCTTTTGTCCTT
CCTCTAGCTCACAAGCATAACATAAAAATTCTTCCAGCTGATTCAGAACA
TTCTGCCATATTTCAGTGTATTCAAGGCTTGCCTGAGGTTGCACTTCGGC
GCATTATTTTAACTGCATCTGGTGGGGCTTTCAGGGACTGGCCCGTGAGA
AACATGAAGAATTTAAGTGGCTGATGCTTGGACCTTCTAACTGGAGTATG
GGAAAAAATTATTGTCATTCTGCTCCCTTTTTACAAGAT
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