EY660228

Overview
NameEY660228
Unique NameEY660228
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660228 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.241e-27
Identity = 93/303 (30.69%), Postives = 149/303 (49.17%), Query Frame = 2
Query:    5 ASASCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLK----RTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSAGQVHVEKMCSNAL-AMIKNMTDTDMMIMRTSNNRKLIEETSTVDGWPAWLSTGDRRLLQSSS-------VTPNVVVAADGSGNFKTXXXXXXXXPXGGTKRYIIRIKARCYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATXAVXGE 877
            A++ C +T YPD CF+++    + S  +    +++   L    TA+      +  LL       NL + ++ +L DC +    T   L +++  +++  N    S+   D +  +SAA+TN+ TCL+G   + A+  ++  L        K  SN+L A+ K    T+      + NR+L+        +P W+   D R L+ SS        + ++VVAADG+GNF T        P     R +I +K   Y EN+++     NI+ IGDG   T ITG+R+V DG TTF+SAT AV GE
Sbjct:   37 ATSFCKNTPYPDACFTSL----KLSISINISPNILSFLLQTLQTALSEAG-KLTDLLSGAGVSNNLVEGQRGSLQDCKDLHHITSSFLKRSISKIQDGVND---SRKLADARAYLSAALTNKITCLEGL--ESASGPLKPKLVTSFTTTYKHISNSLSALPKQRRTTNPKTGGNTKNRRLLGL------FPDWVYKKDHRFLEDSSDGYDEYDPSESLVVAADGTGNFSTINEAISFAPNMSNDRVLIYVKEGVYDENIDIPIYKTNIVLIGDGSDVTFITGNRSVGDGWTTFRSATLAVSGE 323          
BLAST of EY660228 vs. ExPASy Swiss-Prot
Match: PME_DAUCA (Pectinesterase OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.429e-27
Identity = 62/93 (66.67%), Postives = 69/93 (74.19%), Query Frame = 2
Query:  596 QSSSVTPNVVVAADGSGNFKTXXXXXXXXPXGGTKRYIIRIKARCYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATXAVXG 874
            QSS+VTPNVVVAADGSG++KT        P     RY+IRIKA  YRENV+V KK KNIMF+GDGRT TIIT S+NV DGSTTF SAT A  G
Sbjct:    1 QSSTVTPNVVVAADGSGDYKTVSEAVAAAPEDSKTRYVIRIKAGVYRENVDVPKKKKNIMFLGDGRTSTIITASKNVQDGSTTFNSATVAAVG 93          
BLAST of EY660228 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.982e-26
Identity = 73/224 (32.59%), Postives = 118/224 (52.68%), Query Frame = 2
Query:  212 LHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSAGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLIEETSTVDGWPAWLSTGDRRLLQSS--SVTPNVVVAADGSGNFKTXXXXXXXXPXGGTKRYIIRIKARCYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATXAVXGE 877
            ++DCLE +D+TLD L++ V         K      DD+ T +SAA+TNQ TC    S   +      A+ +   ++  + +N+L M  +           +  RKL+ +      +P W+S+ DR+LL++S   + P+ VVAADGSG   +          G + R +I + A  Y+EN+ +  K KN+M +GDG+ +T+I GSR+   G  T++SAT A  G+
Sbjct:  102 VNDCLELLDDTLDMLYRIVVI-------KRKDHVNDDVHTWLSAALTNQETCKQSLSEKSSFNKEGIAIDSFARNLTGLLTNSLDMFVSDKQKSSSSSNLTGGRKLLSDHD----FPTWVSSSDRKLLEASVEELRPHAVVAADGSGTHMSVAEALASLEKG-SGRSVIHLTAGTYKENLNIPSKQKNVMLVGDGKGKTVIVGSRSNRGGWNTYQSATVAAMGD 313          
BLAST of EY660228 vs. ExPASy Swiss-Prot
Match: PME24_ARATH (Putative pectinesterase/pectinesterase inhibitor 24 OS=Arabidopsis thaliana GN=PME24 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.362e-25
Identity = 86/294 (29.25%), Postives = 145/294 (49.32%), Query Frame = 2
Query:   11 ASCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSAGQVHVE---KMCSNALAMIKNMTDTDMMIMRTSNNRKLIEETSTVDGWPAWLSTGDRRLLQSSSV--TPNVVVAADGSGNFKTXXXXXXXXPXGGTKRYIIRIKARCYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATXAVXGE 877
            A C  T + + CF  + + P AS    + +++   ++ IT   V          L      ++  + ++ C E +D T+D L+  +          ++ +  DDL+T +S+A T Q TC++  + D            G+ H++   ++ SNALA+I         + + +++ KL     T          G RRLLQS+ +    ++VVA DGSG ++T        P    KR II +K   Y ENV+V KK  N++ +GDG +++I++G  NV+DG+ TFK+AT AV G+
Sbjct:   72 AVCDVTLHKEKCFETLGSAPNASS--LNPEELFRYAVKITIAEVSKAINAFSSSLG----DEKNNITMNACAELLDLTIDNLNNTLTSSSN--GDVTVPELVDDLRTWLSSAGTYQRTCVETLAPD--------MRPFGESHLKNSTELTSNALAIIT-------WLGKIADSFKLRRRLLTTADVEVDFHAG-RRLLQSTDLRKVADIVVAKDGSGKYRTIKRALQDVPEKSEKRTIIYVKKGVYFENVKVEKKMWNVIVVGDGESKSIVSGRLNVIDGTPTFKTATFAVFGK 341          
BLAST of EY660228 vs. ExPASy Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 5.174e-25
Identity = 77/238 (32.35%), Postives = 123/238 (51.68%), Query Frame = 2
Query:  194 KREKVALHDCLETIDETLDELHKAVEDLEEYPNK-KSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSAGQVHVEKMCSNALAMIKNMTDTDMMIM--------RTSNNRKL--IEETSTVDGWPAWLSTGDRRLLQSSSVTPNVVVAADGSGNFKTXXXXXXXXPXGGTKRYIIRIKARCYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATXAVXG 874
            +R + A+ DCL+ +D + +EL  +    E    K         D +T +SAA++NQ TC++GF  D  +  V+  ++     +  M    L +++       +          +    RKL   +E  ++  +P W+   DR+LL+S+  T +V VA DG+GNF          P   + R++I IK   Y ENVE+ KK  NI+ +GDG   T+I+G+R+ +DG TTF+SAT AV G
Sbjct:   63 RRLQNAVSDCLDLLDFSSEELTWSASASENPKGKGNGTGDVGSDTRTWLSAALSNQATCMEGF--DGTSGLVKSLVAGSLDQLYSMLRELLPLVQPEQKPKAVSKPGPIAKGPKAPPGRKLRDTDEDESLQ-FPDWVRPDDRKLLESNGRTYDVSVALDGTGNFTKIMDAIKKAPDYSSTRFVIYIKKGLYLENVEIKKKKWNIVMLGDGIDVTVISGNRSFIDGWTTFRSATFAVSG 297          
BLAST of EY660228 vs. ExPASy Swiss-Prot
Match: PME46_ARATH (Probable pectinesterase/pectinesterase inhibitor 46 OS=Arabidopsis thaliana GN=PME46 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.966e-24
Identity = 87/301 (28.90%), Postives = 149/301 (49.50%), Query Frame = 2
Query:   11 ASCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSAGQVHVE---KMCSNALAMIK---NMTDTDMM----IMRTSNNRKLIEETSTVDGWPAWLSTGDRRLLQSSSVTPN--VVVAADGSGNFKTXXXXXXXXPXGGTKRYIIRIKARCYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATXAVXGE 877
            A C  T + + CF  + + P AS+  +S +++ + ++ +T T +     G        N T     A+  C+E I   +D+L++ +          S  ++ DDL+T +S+  T Q TC+D     +ANK      + G+ H++   +M SNALA+I     + DT       ++ T N + ++ +   ++G         RRLL+S  +     +VVA DGSG ++T             K  II +K   Y ENV V K   N++ +GDG+++TI++   N +DG+ TF++AT AV G+
Sbjct:   70 ALCDVTLHKEKCFETLGSAPNASR--SSPEELFKYAVKVTITELSKVLDGFSNGEHMDNATS---AAMGACVELIGLAVDQLNETMT---------SSLKNFDDLRTWLSSVGTYQETCMDALV--EANKP--SLTTFGENHLKNSTEMTSNALAIITWLGKIADTVKFRRRRLLETGNAKVVVADLPMMEG---------RRLLESGDLKKKATIVVAKDGSGKYRTIGEALAEVEEKNEKPTIIYVKKGVYLENVRVEKTKWNVVMVGDGQSKTIVSAGLNFIDGTPTFETATFAVFGK 343          
BLAST of EY660228 vs. ExPASy Swiss-Prot
Match: PME23_ARATH (Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana GN=PME23 PE=2 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 1.274e-23
Identity = 90/304 (29.61%), Postives = 143/304 (47.04%), Query Frame = 2
Query:   11 ASCSSTRYPDLCFSAI-AAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLK-RTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSAGQVHVEKMCSNALAM-------IKNMTDTDMMIMRTSNNRKLIEETSTVDGWPAWLSTGDRRLLQSSSVTP-----NVVVAADGSGNFKTXXXXXXXXPXGGTKRYIIRIKARCYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGST-TFKSATXAVXGE 877
            A C+ T + D C +++  A P++   V    D+I++   +T  ++  +       +K + +     K A   C + + + +D+L K    ++   +   +    +DL+  +S ++  Q TC+D F    +N  ++D L   +   E + SN+LAM       I N   T +        RKL+   ST D  P W+    RRL+ +    P     N VVA DG+G FKT        P G    +II IK   Y+E V VTKK  ++ FIGDG  +T+ITGS N   G   TF +AT  + G+
Sbjct:   53 AVCAPTDFKDTCVNSLMGASPDSDDPV----DLIKLGFKVTIKSINESLEKASGDIKAKADKNPEAKGAFELCEKLMIDAIDDLKKC---MDHGFSVDQIEVFVEDLRVWLSGSIAFQQTCMDSFGEIKSNL-MQDMLKIFKTSRE-LSSNSLAMVTRISTLIPNSNLTGLTGALAKYARKLL---STEDSIPTWVGPEARRLMAAQGGGPGPVKANAVVAQDGTGQFKTITDALNAVPKGNKVPFIIHIKEGIYKEKVTVTKKMPHVTFIGDGPNKTLITGSLNFGIGKVKTFLTATITIEGD 344          
BLAST of EY660228 vs. ExPASy Swiss-Prot
Match: PME60_ARATH (Probable pectinesterase/pectinesterase inhibitor 60 OS=Arabidopsis thaliana GN=PME60 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.324e-23
Identity = 77/242 (31.82%), Postives = 119/242 (49.17%), Query Frame = 2
Query:  176 KRTNLTK-----REKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSAGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLIEETSTVDGWPAWLSTGDRRLLQSSSVTPNVVVAADGSGNFKTXXXXXXXXPXGGTK----RYIIRIKARCYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATXAVXG 874
            K TN +K     +++  L DC+    +T+ +L++ ++ +     ++       D +T +S A+TN  TC  G S  + +      +S     +  + SN LA+         ++    N+      T    G+P W+S  +RRLLQ  SV  N+VVA DGSG+FKT          G  K    R++I +K   Y+EN+ V   + NIM +GDG   TIITG R+V  G TT+ SAT  + G
Sbjct:   88 KLTNSSKNCTDFKKQAVLADCINLYGDTVMQLNRTLQGVSSKTGRRCTDF---DAQTWLSTALTNTETCRRGSSDLNVSDFTTPIVS--NTKISHLISNCLAV------NGALLTAGKND----STTGDSKGFPTWVSRKERRLLQLQSVRANLVVAKDGSGHFKTVQAAIDVA--GRRKVTSGRFVIYVKRGIYQENLNVRLNNDNIMLVGDGMRYTIITGGRSVKGGYTTYSSATAGIEG 312          
BLAST of EY660228 vs. ExPASy Swiss-Prot
Match: PME41_ARATH (Probable pectinesterase/pectinesterase inhibitor 41 OS=Arabidopsis thaliana GN=PME41 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 3.139e-22
Identity = 100/327 (30.58%), Postives = 145/327 (44.34%), Query Frame = 2
Query:    5 ASASCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIE---MSLNITTTAVEHNYFGIQKLLKRTN--LTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLS-QHADDLKTLMSAAMTNQGTCLDGFSHDDANKH-VRDALSAGQVHVEKMCSNALAMI--------------------KNMTDTDMMIMRTSNNR---KLIEETSTVDGWPAWLSTGDRRLLQSSS------VTPNVVVAADGSGNFKTXXXXXXXXPX---GGTKRYIIRIKARCYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATXAV 868
            +S  C +T  P  C S            TSQ DV E    SL  + T        I + LKR N  L++    AL DC      T D L  + E +    + K+LS   AD+++TL+SAA+TN+ TCLDG +   ++   +R+ ++   ++  K+ S +LA+                     KN            N     K+ E T  V     + S   R+L    +      V+  V V  +G+GNF T        P    G    ++I + +  Y ENV + K  + +M IGDG  RT++TG+RNVVDG TTF SAT AV
Sbjct:   31 SSTICKTTPDPKFCKSVFPQ--------TSQGDVREYGRFSLRKSLTQSRKFTRTIDRYLKRNNALLSQSAVGALQDCRYLASLTTDYLITSFETVNITTSSKTLSFSKADEIQTLLSAALTNEQTCLDGINTAASSSWTIRNGVALPLINDTKLFSVSLALFTKGWVPKKKKQVASYSWAHPKNTHSHTKPFRHFRNGALPLKMTEHTRAV-----YESLSRRKLADDDNDVNTVLVSDIVTVNQNGTGNFTTITEAVNSAPNKTDGTAGYFVIYVTSGVYEENVVIAKNKRYLMMIGDGINRTVVTGNRNVVDGWTTFNSATFAV 344          
BLAST of EY660228 vs. ExPASy Swiss-Prot
Match: PME16_ARATH (Probable pectinesterase/pectinesterase inhibitor 16 OS=Arabidopsis thaliana GN=PME16 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.558e-21
Identity = 76/227 (33.48%), Postives = 117/227 (51.54%), Query Frame = 2
Query:  212 LHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSH-DDANKHVRDALSAGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLIEETSTVDGWPAWL-STGDRRLLQSSSVTPNV--VVAADGSGNFKTXXXXXXXXPXGGTK-RYIIRIKARCYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATXAVXGE 877
            +HDCLE +D+TLD L +   D +E           +D+ T +SAA+TNQ TC        ++ KH         + ++ +  N   ++ +    D+ +   S +RKL+   S  + +P ++ S+  RRLL++     NV  VVA DGSG  KT            +  R  I +KA  Y EN+ +  K KN+M +GDG+ +T+I GSR+   G TT+K+AT A  GE
Sbjct:   98 IHDCLELLDDTLDMLSRIHADNDE-----------EDVHTWLSAALTNQDTCEQSLQEKSESYKH--------GLAMDFVARNLTGLLTS--SLDLFVSVKSKHRKLL---SKQEYFPTFVPSSEQRRLLEAPVEELNVDAVVAPDGSGTHKTIGEALLSTSLASSGGRTKIYLKAGTYHENINIPTKQKNVMLVGDGKGKTVIVGSRSNRGGWTTYKTATVAAMGE 300          
The following BLAST results are available for this feature:
BLAST of EY660228 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
PME12_ARATH3.241e-2730.69Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME_DAUCA9.429e-2766.67Pectinesterase OS=Daucus carota PE=1 SV=1[more]
PME35_ARATH7.982e-2632.59Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME24_ARATH1.362e-2529.25Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME44_ARATH5.174e-2532.35Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME46_ARATH1.966e-2428.90Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME23_ARATH1.274e-2329.61Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME60_ARATH6.324e-2331.82Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME41_ARATH3.139e-2230.58Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME16_ARATH1.558e-2133.48Probable pectinesterase/pectinesterase inhibitor 1... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-H08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660228 ID=EY660228; Name=EY660228; organism=Citrus sinensis; type=EST; length=884bp
CCACGCGTCCGCATCATGTAGCAGCACAAGGTACCCGGACTTATGCTTTT
CGGCTATTGCTGCCGTTCCAGAGGCCTCCAAAAAGGTGACAAGCCAAAAG
GACGTTATTGAGATGTCCTTAAACATCACAACAACAGCCGTGGAACACAA
CTACTTCGGGATTCAGAAGCTCTTGAAGAGAACGAATCTCACCAAACGGG
AAAAGGTTGCTCTCCATGACTGTCTTGAGACGATCGATGAGACTCTTGAT
GAGTTACACAAAGCCGTCGAGGATCTTGAGGAGTACCCGAACAAGAAATC
TTTATCACAGCATGCGGATGATCTCAAAACCCTAATGAGTGCCGCGATGA
CCAATCAGGGGACGTGTCTTGATGGGTTCTCTCATGATGATGCTAATAAG
CACGTGCGGGATGCGTTGTCAGCCGGCCAGGTTCATGTTGAGAAGATGTG
TAGCAATGCGCTTGCTATGATCAAGAACATGACTGACACTGACATGATGA
TCATGAGGACTTCAAACAACAGGAAGCTGATAGAGGAGACCAGTACGGTT
GATGGGTGGCCGGCGTGGCTGTCCACCGGAGACAGGAGGCTGTTGCAGTC
CTCGTCGGTGACACCGAACGTGGTGGTGGCAGCAGATGGCAGCGGAAACT
TTAAGACGGTGGCGGCAGCGGTGGCGGCGGCTCCTCANGGAGGCACTAAG
CGGTATATTATTAGGATTAAAGCCCGGTGTTATCGGGAAAATGTTGAGGT
GACAAAGAAGCATAAAAATATAATGTTCATCGGTGACGGGAGGACTAGAA
CTATCATCACAGGAAGTAGAAATGTGGTTGATGGAAGCACAACTTTCAAG
TCTGCTACAGNTGCTGTTNGTGGTGAAAGGATTC
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