EY660228

Overview
NameEY660228
Unique NameEY660228
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5726 contig Csv1_Contig5726:606..1489. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY660228 vs. ExPASy Swiss-Prot
Match: PME_ACTDE (Pectinesterase OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.155e-16
Identity = 46/91 (50.55%), Postives = 58/91 (63.74%), Query Frame = 2
Query:  602 SSVTPNVVVAADGSGNFKTXXXXXXXXPXGGTKRYIIRIKARCYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATXAVXG 874
            + + P+VVVA DGSGNF T            T R++I IK   Y E V+V KK  N+MFIGDG  +T I G+R+VVDG TTF+S+T AV G
Sbjct:    4 TDIVPDVVVAKDGSGNFTTVGAAVAAAKDSSTARFVIYIKEGAYFEYVDVDKKKTNLMFIGDGIGKTWIKGNRSVVDGWTTFRSSTVAVVG 94          
BLAST of EY660228 vs. ExPASy Swiss-Prot
Match: PME43_ARATH (Putative pectinesterase/pectinesterase inhibitor 43 OS=Arabidopsis thaliana GN=PME43 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.971e-16
Identity = 47/112 (41.96%), Postives = 69/112 (61.61%), Query Frame = 2
Query:  557 WPAWLSTGDRRLL----QSSSVTPNVVVAADGSGNFKTXXXXXXXXPXGGTKRYIIRIKARCYRENVEVTKKHKNIMFIGDGRTRTIITGS-RNVVDGSTTFKSATXAVXGE 877
            +P W++   RRLL    +++ +  NVVVA DGSG  KT        P   TK+++I IK   Y+E VEVTKK  ++MF+GDG T+T+ITG    + D   T+++A+ AV G+
Sbjct:  367 FPPWVTPHSRRLLARRPRNNGIKANVVVAKDGSGKCKTIAQALAMVPMKNTKKFVIHIKEGVYKEKVEVTKKMLHVMFVGDGPTKTVITGDIAFLPDQVGTYRTASVAVNGD 478          
BLAST of EY660228 vs. ExPASy Swiss-Prot
Match: PME20_ARATH (Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana GN=PME20 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.574e-16
Identity = 74/247 (29.96%), Postives = 114/247 (46.15%), Query Frame = 2
Query:  209 ALHDCLETIDETLDELHKAVEDLEEYPNKKSLS-QHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSAGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLIEETS-----------------TVDGWPAWLSTGDRRLLQSSS----VTPNVVVAADGSGNFKTXXXXXXXXPX---GGTKRYIIRIKARCYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATXAVXG 874
            AL DC      T+D L  + +  +   + K+LS   A+D+ T +SAA+TN+ TCL+G     +     + LS    +  K+   +LA+          + R   +R + +  +                 T      + +   R+LLQS +    V+  V V  +G+GNF T        P    G    ++I + A  Y E VEV K  + +M IGDG  +T+ITG+R+VVDG TTF SAT  + G
Sbjct:   99 ALEDCKFLASLTMDYLLSSSQTAD---STKTLSLSRAEDVHTFLSAAITNEQTCLEGLKSTASE----NGLSGDLFNDTKLYGVSLALFSKG-----WVPRRQRSRPIWQPQARFKKFFGFRNGKLPLKMTERARAVYNTVTRRKLLQSDADAVQVSDIVTVIQNGTGNFTTINAAIAAAPNKTDGSNGYFLIYVTAGLYEEYVEVPKNKRYVMMIGDGINQTVITGNRSVVDGWTTFNSATFILSG 333          
BLAST of EY660228 vs. ExPASy Swiss-Prot
Match: 21KD_DAUCA (21 kDa protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.845e-15
Identity = 41/157 (26.11%), Postives = 93/157 (59.24%), Query Frame = 2
Query:   14 SCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKS--LSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSAGQVHVEKMCSNALAMIKN 478
            SC+ T YP +C  +++A  +  +   + +++   +L ++ T  +     +++L K   L  R+  A+HDCLE ++++LD + ++ ++++   + K    +    +++T +SAA+T++ TC+DGF+    +  +++++ A  V V ++ SNALA++ N
Sbjct:   32 SCTLTTYPAVCEQSLSAYAKTIQN--NPQELASTALQVSLTRTQQAQTFMKRLNKFKGLKARQYAAIHDCLEEVEDSLDRVSRSCDEMKNLSHAKGNDFTFRMSNVETWVSAALTDETTCMDGFAGKGMDGKIKESVRAQVVAVARVTSNALALVNN 186          
BLAST of EY660228 vs. ExPASy Swiss-Prot
Match: PME64_ARATH (Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana GN=PME64 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 6.339e-15
Identity = 82/299 (27.42%), Postives = 135/299 (45.15%), Query Frame = 2
Query:   14 SCSSTRYPDLCFSAIAA---VPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSAGQVHVEKMCSNALAMIKNMT---DTDMMIMRTSNNRKLIEETSTVDGWPAWLSTGDRRLLQ-SSSVTPNVVVAADGSGN--FKTXXXXXXXXPXGG-TKRYIIRIKARCYRENVEVTKKHKNIMFIGDGRTRTIITGSRNV-VDGSTTFKSATXAVXGE 877
            +C++TR+PD C ++++    VP   K V     +I  +++++   ++     IQ +L  +   +        CLE +  +        +   E  +    S    D +  MSAA+  Q  C  G    +  K V D ++  +  V  +  NAL+M+ +     D  +  +R +  R    E +   G      TG    L   S +T +V V  +G  +  +KT        P    T +++IRI+   Y E V V  + KN++FIGDG  +T+ITGS NV   G TTF+SAT  V G+
Sbjct:   96 ACNATRFPDHCVASLSKPGQVPPDPKPV----QIIHSAISVSYENLKSGQSKIQSILDSSAGNRNRTNIATICLEILSYS--------QHRTESTDIAVTSGDIKDARAWMSAALAYQFDCWSGLKTVNDTKQVVDTITFFEGLVN-LTGNALSMMLSFDSFGDDVVSWIRPATERDGFWEKA---GPSLGSGTGTEASLGFPSGLTEDVTVCKNGGKDCKYKTVQEAVDSAPDTNRTVKFVIRIREGVYEETVRVPFEKKNVVFIGDGMGKTVITGSLNVGQPGMTTFESATVGVLGD 378          
BLAST of EY660228 vs. ExPASy Swiss-Prot
Match: PME25_ARATH (Probable pectinesterase/pectinesterase inhibitor 25 OS=Arabidopsis thaliana GN=PME25 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.844e-14
Identity = 87/327 (26.61%), Postives = 138/327 (42.20%), Query Frame = 2
Query:    8 SASCSSTRYPDLCFSAIAAV------PEASKKVTSQ---KDVIEMSLNITTTA--VEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYP-NKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSAGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLIEETSTVDGWPAWLSTGDRRLLQSSS---------------------VTPNVVVAADGSGNFKTXXXXXXXXPXGGTKR---YIIRIKARCYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATXAVXGER 880
            S +C ST YP LC + + AV      P    K T +   K    +S  IT+ A  VE          K  + T  E  A+ DC E  + +++ L     +L+       +L +H +   +L+S  +TNQ TCLDG    +A      A+ +   ++ ++ S +L ++ +  + ++   + S  + L    ST       L  G R+   +                       V+  V+V    S NF T        P         ++I  +   Y E + V    KN+M +GDG  +TIITG+ NVVDG TT+  ++ AV GER
Sbjct:   80 SLACKSTPYPKLCRTILNAVKSSPSDPYRYGKFTIKQCLKQASRLSKVITSYARRVES---------KPGSATAEEIGAVADCGELSELSVNYLETVTTELKTAQVMTAALVEHVN---SLLSGVVTNQQTCLDGLV--EAKSGFAAAIGSPMGNLTRLYSISLGLVSHALNRNLKRFKASKGKILGGGNSTYREPLETLIKGLRKTCDNDKDCRKTSRNLGELGETSGGSILVSKAVIVGPFKSDNFTTITDAIAAAPNNTRPEDGYFVIYAREGVYEEYIVVPINKKNLMLMGDGINKTIITGNHNVVDGWTTYNCSSFAVVGER 392          
BLAST of EY660228 vs. ExPASy Swiss-Prot
Match: PME51_ARATH (Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana GN=PME51 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.409e-14
Identity = 84/298 (28.19%), Postives = 125/298 (41.95%), Query Frame = 2
Query:   14 SCSSTRYPDLCFSAIAA---VPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSA--GQVHVEKMCSNALAMI---KNMTDTDMMIMRTSNNRKLIEETSTVDGWPAWLSTGDRRLLQSSSVTPNVVVAADGSGNFKTXXXXXXXXPX-GGTKRYIIRIKARCYRENVEVTKKHKNIMFIGDGRTRTIITGSRNV-VDGSTTFKSATXAVXGE 877
            +C++TRYPD C S+++    VP   K +      I  S     TA       +   +   N T     A + CL+ +  +        + L     K        D +  MSAA+  Q        + +    V + +S   G +HV    SNAL+M+    N  D        +  R    E  T  G     STG   L   S +  +V V  DG   +KT        P   G ++++I+I    Y ENV V  + KN++FIGDG  +T+ITGS N  + G TT+ +AT  V G+
Sbjct:   48 ACNATRYPDQCVSSLSEQGRVPPDPKPIQIIHSAISFSFQNLKTAQSKIKSIVDSSVGNLNRTN----AANTCLQLLTYSEHRTQSTDQALTRGKIK--------DARAWMSAALVYQYDSWSALKYVNDTSQVGETMSFLDGLIHVT---SNALSMMVSYDNFGDNVASWTYPATERDGFWE-KTGPGLGLDPSTG-LNLGFPSGLKEDVTVCKDGKCGYKTVQDAVNAAPEDNGMRKFVIKISEGVYEENVIVPFEKKNVVFIGDGMGKTVITGSLNAGMPGITTYNTATVGVVGD 328          
BLAST of EY660228 vs. ExPASy Swiss-Prot
Match: PME42_ARATH (Probable pectinesterase/pectinesterase inhibitor 42 OS=Arabidopsis thaliana GN=PME42 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.409e-14
Identity = 74/294 (25.17%), Postives = 133/294 (45.24%), Query Frame = 2
Query:   44 CFSAIAAVPEASKKVTS--QKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETL----DELHKAVEDL--EEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHV----RDALSAGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLIEETSTVDGWPAWLSTGDRRLL----QSSSVTPNVVVAADGSGNFKTXXXXXXXXPXGGTKRYIIRIKARCYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATXAVXGE 877
            C + +  +  AS  ++   ++D++ + L  +   ++    G+ +  K+    + +K+ L +     +E +    D + ++VE+L   E+P   S     +++ T +S  +T+  TC+D        + V    +D +S  +V        ALA+  +++  D             E  S V   P+WLS  D++ L    ++     +VVVA DG+G + T        P    KR+II IK   Y E V +     N+  IGDG+  TIITG+ +  +   TF +AT A  G+
Sbjct:   31 CQNFLLELKTASSSLSEIRRRDLLIIVLKNSVRKIDMAMIGVMEDTKQHEEMENDKLCLKEDTNLFEEMMESAKDRMIRSVEELLGGEFPYLGSY----ENIHTWLSGVLTSYITCIDEIGDGAYKRRVEPQLQDLISKAKV--------ALALFISISPRDNT-----------ELNSVVPNSPSWLSHVDKKDLYLNAEALKKIADVVVAKDGTGKYNTVNAAIAAAPQHSHKRFIIYIKTGIYDEIVAIENTKPNLTLIGDGQDSTIITGNLSASNVRRTFYTATFASNGK 301          
BLAST of EY660228 vs. ExPASy Swiss-Prot
Match: PME19_ARATH (Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana GN=PME19 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.154e-14
Identity = 64/226 (28.32%), Postives = 107/226 (47.35%), Query Frame = 2
Query:  227 ETIDETLDELHKAVEDL--EEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVR----DALSAGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLIEETSTVDGWPAWLSTGDRRLL----QSSSVTPNVVVAADGSGNFKTXXXXXXXXPXGGTKRYIIRIKARCYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATXAVXG 874
            E ++ T D + ++VE+L   E+PN+ S     +++ T +S+ +T+  TC+D        + V     D +S  ++        ALA+  +++  D        N +LI   S +   P+WL   D++ L    ++     +VVVA DG+G + T        P    KR++I IK   Y E V +     N+  IGDG+  TIIT + +  +   TF +AT A  G
Sbjct:   98 EMMESTKDRMIRSVEELLGGEFPNRGSY----ENVHTWLSSVLTSYITCIDEIGEGAYKRRVEPKLEDLISRARI--------ALALFISISPRD--------NTELI---SVIPNSPSWLFHVDKKDLYLNAEALKKIADVVVAKDGTGKYSTVNAAIAAAPQHSQKRFVIYIKTGIYDEIVVIENTKPNLTLIGDGQDLTIITSNLSASNVRRTFNTATVASNG 300          
BLAST of EY660228 vs. ExPASy Swiss-Prot
Match: PME56_ARATH (Probable pectinesterase 56 OS=Arabidopsis thaliana GN=PME56 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.039e-13
Identity = 41/100 (41.00%), Postives = 57/100 (57.00%), Query Frame = 2
Query:  569 LSTGDRRLLQSSSVTPNVVVAADGSGNFKTXXXXXXXXPXGGTKRYIIRIKARCYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATXAV 868
            +ST D+ L   +    +++VA DGSGNF T        P  G K ++I IK   Y+E + + KK  N+  +GDGR  T+++G  N VDG  TF SAT AV
Sbjct:   33 ISTPDQALKDKA----DLIVAKDGSGNFTTVNEAVAAAPENGVKPFVIYIKEGLYKEVIRIGKKKTNLTLVGDGRDLTVLSGDLNGVDGIKTFDSATLAV 128          
The following BLAST results are available for this feature:
BLAST of EY660228 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
PME_ACTDE1.155e-1650.55Pectinesterase OS=Actinidia deliciosa PE=1 SV=1[more]
PME43_ARATH1.971e-1641.96Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME20_ARATH2.574e-1629.96Probable pectinesterase/pectinesterase inhibitor 2... [more]
21KD_DAUCA2.845e-1526.1121 kDa protein OS=Daucus carota PE=2 SV=1[more]
PME64_ARATH6.339e-1527.42Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME25_ARATH1.844e-1426.61Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME51_ARATH2.409e-1428.19Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME42_ARATH2.409e-1425.17Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME19_ARATH9.154e-1428.32Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME56_ARATH2.039e-1341.00Probable pectinesterase 56 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-H08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660228 ID=EY660228; Name=EY660228; organism=Citrus sinensis; type=EST; length=884bp
CCACGCGTCCGCATCATGTAGCAGCACAAGGTACCCGGACTTATGCTTTT
CGGCTATTGCTGCCGTTCCAGAGGCCTCCAAAAAGGTGACAAGCCAAAAG
GACGTTATTGAGATGTCCTTAAACATCACAACAACAGCCGTGGAACACAA
CTACTTCGGGATTCAGAAGCTCTTGAAGAGAACGAATCTCACCAAACGGG
AAAAGGTTGCTCTCCATGACTGTCTTGAGACGATCGATGAGACTCTTGAT
GAGTTACACAAAGCCGTCGAGGATCTTGAGGAGTACCCGAACAAGAAATC
TTTATCACAGCATGCGGATGATCTCAAAACCCTAATGAGTGCCGCGATGA
CCAATCAGGGGACGTGTCTTGATGGGTTCTCTCATGATGATGCTAATAAG
CACGTGCGGGATGCGTTGTCAGCCGGCCAGGTTCATGTTGAGAAGATGTG
TAGCAATGCGCTTGCTATGATCAAGAACATGACTGACACTGACATGATGA
TCATGAGGACTTCAAACAACAGGAAGCTGATAGAGGAGACCAGTACGGTT
GATGGGTGGCCGGCGTGGCTGTCCACCGGAGACAGGAGGCTGTTGCAGTC
CTCGTCGGTGACACCGAACGTGGTGGTGGCAGCAGATGGCAGCGGAAACT
TTAAGACGGTGGCGGCAGCGGTGGCGGCGGCTCCTCANGGAGGCACTAAG
CGGTATATTATTAGGATTAAAGCCCGGTGTTATCGGGAAAATGTTGAGGT
GACAAAGAAGCATAAAAATATAATGTTCATCGGTGACGGGAGGACTAGAA
CTATCATCACAGGAAGTAGAAATGTGGTTGATGGAAGCACAACTTTCAAG
TCTGCTACAGNTGCTGTTNGTGGTGAAAGGATTC
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