EY660219

Overview
NameEY660219
Unique NameEY660219
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7546 contig Csv1_Contig7546:1..920. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY660219 vs. ExPASy Swiss-Prot
Match: SEC22_YARLI (Protein transport protein SEC22 OS=Yarrowia lipolytica GN=SEC22 PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.297e-39
Identity = 81/187 (43.32%), Postives = 128/187 (68.45%), Query Frame = 3
Query:  132 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQ-IETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAK 689
            MV  T+I R +DGLPL+  +DDG++  +    K+Q K + + LS   N A R SIE+G YV HY+++  + Y  + + +YP+KLAF YL++L  EF++ +G + ++   RPY F++FDTF+QKTK++YQDTR   N+ KLN EL +V ++MT+N++++L  G  LD +S++SS L +ES+ Y   A+
Sbjct:    1 MVLSTLIMRASDGLPLSASVDDGQE--NLSEQKKQCKLVTQKLSA--NSADRASIESGNYVIHYLMKDGIVYYCISESSYPRKLAFSYLDELDREFQKSHGQEALKEGVRPYKFVEFDTFMQKTKRVYQDTRATHNLDKLNTELQDVTRVMTKNIEDLLHRGHSLDHMSDLSSNLRTESKKYRRAAQ 183          
BLAST of EY660219 vs. ExPASy Swiss-Prot
Match: SEC22_SCHPO (Protein transport protein sec22 OS=Schizosaccharomyces pombe GN=sec22 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 9.034e-36
Identity = 74/174 (42.53%), Postives = 115/174 (66.09%), Query Frame = 3
Query:  171 LPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQ-IETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAK 689
            LPLA  +DD    R+ E +K+Q K + K LS       R SIE+G Y FHY+I+  +CYL +C+++YP+KLAF YLE+L  EF    G + ++   RPYAF++FDTF+QK+K++Y   R   N+ KLN EL +V ++MT+N++++L  G+ L++++++SS L   S  Y   A+
Sbjct:    7 LPLAASVDDESTERNLESHKKQAKLILKRLS--PTSEKRASIESGDYTFHYLIDNGICYLCICEQSYPRKLAFSYLEELAGEFWNSFGEEALQPGLRPYAFVQFDTFMQKSKRVYNTPRANDNLDKLNTELKDVTRVMTKNIEDLLYRGDSLEKMADLSSDLRYSSAKYKKAAR 178          
BLAST of EY660219 vs. ExPASy Swiss-Prot
Match: SEC22_ASHGO (Protein transport protein SEC22 OS=Ashbya gossypii GN=SEC22 PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.957e-34
Identity = 75/189 (39.68%), Postives = 121/189 (64.02%), Query Frame = 3
Query:  132 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQ-IETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDL 695
            M+K T+I R  DGLPL   +DD  D   A+  K++VK L    +     A+  ++E+G Y  HY+ +  V Y+ + +R YP+ LAF YL ++++EFE   G + ++ + RPYAF+ FD F+QKTKK+Y D R Q N+ +LN +L  V QIMT+N++++L  G+ LD++S++S+ L  +S+ Y   A+ +
Sbjct:    1 MIKSTLIFR-DDGLPLCSSVDDDTDPSLADQ-KKKVKVLISRFT--PQSANEATLESGAYEMHYVRQQSVVYIVIVERGYPRNLAFAYLANVRHEFEHSYGNEYVKPSVRPYAFVSFDNFLQKTKKIYNDKRVQGNLDQLNSDLLGVKQIMTKNIEDLLYRGDSLDRMSDLSASLRQDSKKYRRSAQKI 185          
BLAST of EY660219 vs. ExPASy Swiss-Prot
Match: SEC22_KLULA (Protein transport protein SEC22 OS=Kluyveromyces lactis GN=SEC22 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.595e-32
Identity = 75/189 (39.68%), Postives = 116/189 (61.38%), Query Frame = 3
Query:  132 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETA-ARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDL 695
            M++ T+I R  DGLPL   +DD  D    E  K++VK L    +     A+  ++E+G +  HYI    V Y+ + +R YP+ LAF YL D++ EFE   G Q+  +  RPY F+ FD F+QKTKK+Y D R Q N+ +LN +L  V QIMT+N++++L  G+ LD++S+MS+ L  +++ Y   A+ +
Sbjct:    1 MIRSTLIFR-EDGLPLCASVDDDTDPSLQEQ-KKKVKILISRFT--PTSANEATVESGDFEIHYIRLNTVVYIVVAERNYPRNLAFSYLADIQQEFEHSYGGQLSKSNVRPYEFVSFDNFLQKTKKVYNDKRVQGNMDQLNQDLKGVKQIMTKNIEDLLYRGDSLDKMSDMSASLRQDAKKYRASAQKI 185          
BLAST of EY660219 vs. ExPASy Swiss-Prot
Match: SEC22_YEAST (Protein transport protein SEC22 OS=Saccharomyces cerevisiae GN=SEC22 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.546e-30
Identity = 73/189 (38.62%), Postives = 111/189 (58.73%), Query Frame = 3
Query:  132 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQI-ETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDL 695
            M+K T+I R  DGLPL   +D+  D    E  KQ+VK +   L+     A+  ++E+G +  HY+ +  V Y  +C+  YP+ LAF YL D+  EFE     +  +   RPY F+ FD F+Q TKK Y D + Q N+ +LN EL  V QIM++N++++L  G+ LD++S+MSS L   S+ Y   A+ +
Sbjct:    1 MIKSTLIYR-EDGLPLCTSVDNENDPSLFEQ-KQKVKIVVSRLT--PQSATEATLESGSFEIHYLKKSMVYYFVICESGYPRNLAFSYLNDIAQEFEHSFANEYPKPTVRPYQFVNFDNFLQMTKKSYSDKKVQDNLDQLNQELVGVKQIMSKNIEDLLYRGDSLDKMSDMSSSLKETSKRYRKSAQKI 185          
BLAST of EY660219 vs. ExPASy Swiss-Prot
Match: SEC22_CANGA (Protein transport protein SEC22 OS=Candida glabrata GN=SEC22 PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.308e-28
Identity = 67/189 (35.45%), Postives = 109/189 (57.67%), Query Frame = 3
Query:  132 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQI-ETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDL 695
            M+K T++ R  DGLPL   +DD  D+ D  + +Q+ +            A+  ++E+     HYI +  V Y  +C+  YP+ LAF YL D+  EF+     ++ +   RPYAF  FDTF+Q+TKK Y D + Q N+ +LN EL  V QIM++N++++L  G+ L+++ +MS+ L   S+ Y   A+ +
Sbjct:    1 MIKSTVVYR-DDGLPLCSSVDD--DISDLSLNEQKKRIKMVVSRMTPQSANEATLESKDSEIHYIRQQGVIYFVICEAGYPRNLAFSYLNDVAVEFQHSYSNELSKPTIRPYAFASFDTFLQRTKKAYSDKKVQDNLDQLNQELVGVKQIMSKNIEDLLYRGDSLEKMDDMSNSLKISSKKYRKSAQKI 186          
BLAST of EY660219 vs. ExPASy Swiss-Prot
Match: SC22A_MOUSE (Vesicle-trafficking protein SEC22a OS=Mus musculus GN=Sec22a PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.092e-16
Identity = 52/148 (35.14%), Postives = 78/148 (52.70%), Query Frame = 3
Query:  132 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNE-ASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEF-ERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEV 569
            M+    + RV DGLPL+   D      +     Q+ +  FK LSR   +   R +++TG Y  ++I    V Y+ +C   YP  LAF +L++L+ EF    N  +  TA RPY FI+FD FIQ+TK+ Y + R+      L+D   E+
Sbjct:    3 MILSASVIRVRDGLPLSASTD-----YEQSTGMQECRKYFKMLSRKLAQFPDRCTLKTGRYNINFISSLGVSYMMLCSENYPNVLAFSFLDELQKEFITTYNMMKTNTAVRPYCFIEFDNFIQRTKQRYNNPRSLSTKINLSDMQMEI 145          
BLAST of EY660219 vs. ExPASy Swiss-Prot
Match: SC22A_HUMAN (Vesicle-trafficking protein SEC22a OS=Homo sapiens GN=SEC22A PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.569e-16
Identity = 52/148 (35.14%), Postives = 78/148 (52.70%), Query Frame = 3
Query:  132 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNEA-SRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEF-ERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEV 569
            M+    + RV DGLPL+   D      +     Q+ +  FK LSR   +   R +++TG Y  ++I    V Y+ +C   YP  LAF +L++L+ EF    N  +  TA RPY FI+FD FIQ+TK+ Y + R+      L+D   E+
Sbjct:    3 MILSASVIRVRDGLPLSASTD-----YEQSTGMQECRKYFKMLSRKLAQLPDRCTLKTGHYNINFISSLGVSYMMLCTENYPNVLAFSFLDELQKEFITTYNMMKTNTAVRPYCFIEFDNFIQRTKQRYNNPRSLSTKINLSDMQTEI 145          
BLAST of EY660219 vs. ExPASy Swiss-Prot
Match: SC22A_MACFA (Vesicle-trafficking protein SEC22a OS=Macaca fascicularis GN=SEC22A PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.088e-16
Identity = 52/148 (35.14%), Postives = 78/148 (52.70%), Query Frame = 3
Query:  132 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNEA-SRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEF-ERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEV 569
            M+    + RV DGLPL+   D      +     Q+ +  FK LSR   +   R +++TG Y  ++I    V Y+ +C   YP  LAF +L++L+ EF    N  +  TA RPY FI+FD FIQ+TK+ Y + R+      L+D   E+
Sbjct:    3 MILSASVIRVRDGLPLSASTD-----YEQSTGMQECRKYFKMLSRKLAQLPDRCTLKTGHYNINFISSLGVSYMMLCTDNYPNVLAFSFLDELQKEFITTYNMMKTNTAVRPYCFIEFDNFIQRTKQRYNNPRSLSTKINLSDMQTEI 145          
BLAST of EY660219 vs. ExPASy Swiss-Prot
Match: SC22A_RAT (Vesicle-trafficking protein SEC22a OS=Rattus norvegicus GN=Sec22a PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.356e-15
Identity = 51/148 (34.46%), Postives = 78/148 (52.70%), Query Frame = 3
Query:  132 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNE-ASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEF-ERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEV 569
            M+    + RV DGLPL+   D      +     Q+ +  FK LSR   +   R +++TG +  ++I    V Y+ +C   YP  LAF +L++L+ EF    N  +  TA RPY FI+FD FIQ+TK+ Y + R+      L+D   E+
Sbjct:    3 MILSASVVRVRDGLPLSASTDC-----EQSAGVQECRKYFKMLSRKLAQFPDRCTLKTGRHNINFISSLGVSYMMLCTENYPNVLAFSFLDELQKEFITTYNMMKTNTAVRPYCFIEFDNFIQRTKQRYNNPRSLSTKINLSDMQMEI 145          
The following BLAST results are available for this feature:
BLAST of EY660219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
SEC22_YARLI2.297e-3943.32Protein transport protein SEC22 OS=Yarrowia lipoly... [more]
SEC22_SCHPO9.034e-3642.53Protein transport protein sec22 OS=Schizosaccharom... [more]
SEC22_ASHGO4.957e-3439.68Protein transport protein SEC22 OS=Ashbya gossypii... [more]
SEC22_KLULA1.595e-3239.68Protein transport protein SEC22 OS=Kluyveromyces l... [more]
SEC22_YEAST2.546e-3038.62Protein transport protein SEC22 OS=Saccharomyces c... [more]
SEC22_CANGA5.308e-2835.45Protein transport protein SEC22 OS=Candida glabrat... [more]
SC22A_MOUSE2.092e-1635.14Vesicle-trafficking protein SEC22a OS=Mus musculus... [more]
SC22A_HUMAN3.569e-1635.14Vesicle-trafficking protein SEC22a OS=Homo sapiens... [more]
SC22A_MACFA6.088e-1635.14Vesicle-trafficking protein SEC22a OS=Macaca fasci... [more]
SC22A_RAT1.356e-1534.46Vesicle-trafficking protein SEC22a OS=Rattus norve... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-G11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660219 ID=EY660219; Name=EY660219; organism=Citrus sinensis; type=EST; length=917bp
CCACGCGTCCGCTCTTTTCTCTCTGTCGATCCTTGTCTTCTCTCTTCTTC
AGATCGTTGAATTCGCGTAGAAAATCCCAAATGCAAAAAGGGTGATTTGG
TGTAGCAGAGGAATTTTAAAGTGAGGCAAAAATGGTGAAGATGACGATGA
TTGCCCGTGTTACTGATGGTCTTCCATTGGCGGAGGGACTGGATGATGGT
CGTGATTTGAGAGATGCTGAGATGTACAAGCAACAAGTCAAGGCCTTGTT
TAAGAATCTCTCGAGAGGCCAGAATGAGGCTTCAAGGATGTCAATTGAGA
CAGGACCTTATGTTTTCCATTATATCATTGAAGGACGTGTTTGTTACTTG
ACAATGTGCGACCGTGCTTATCCCAAAAAGCTGGCCTTTCAATACTTGGA
AGACCTCAAGAACGAATTTGAGCGTGTTAATGGGGCTCAGATTGAAACTG
CTGCCAGGCCTTATGCTTTCATAAAATTTGATACATTCATACAGAAAACA
AAGAAATTGTACCAGGACACACGTACCCAGCGGAATATTGCAAAGTTGAA
TGATGAACTTTATGAGGTCCACCAGATAATGACCCGGAATGTGCAGGAAG
TTCTTGGTGTTGGTGAAAAGTTGGACCAGGTCAGTGAAATGTCCAGTCGG
TTGACATCAGAGTCGCGCATTTATGCTGATAAGGCAAAAGATTTGATCGA
CAGGCTTTAATTCGGAAATGGGCTCCTGTGGCCATTGNNTGTGGGGTGGT
CTTCATTGTCTTTTGGCTCAAAAAAAGCTATGGTGATTCAGTTGCCCCTA
TGCCGNTCTAATAGTTGCACATTGTGCCTGGGTTCCTCTGCGTCAATGTG
GGGTGCTGGGTGTCCTGGCTCCGTGTCAACACTTCAAAGCATCAGATTTC
ATCGACACTTGTTCTGN
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