EY660210

Overview
NameEY660210
Unique NameEY660210
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY660210 vs. ExPASy Swiss-Prot
Match: DCAM2_BRAJU (S-adenosylmethionine decarboxylase proenzyme 2 OS=Brassica juncea GN=SAMDC2 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.429e-22
Identity = 45/75 (60.00%), Postives = 52/75 (69.33%), Query Frame = 3 
Query:  534 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPANAQLFSSLSNEYPDSYVLSESKLFCVP 758
            + VSAIGFEGYEKRLEVSFFEP +F D  G+GLR+L      +   PA   + SSLSN+  DSYVLSES LF  P
Sbjct:    1 MSVSAIGFEGYEKRLEVSFFEPSLFVDTHGKGLRALPKSQIDEILAPAECTIVSSLSNDELDSYVLSESSLFIFP 75

HSP 2 Score: 40.817 bits (94), Expect = 5.429e-22
Identity = 24/67 (35.82%), Postives = 32/67 (47.76%), Query Frame = 1 
Query:  742 SSFVYPYKVIIKTCGTTRLLLFIPANLKXXXXXXXXXXXXXXXXXXXIFAGAQPF-HNELLLGITVL 939
            S F++PYK+IIKTCGTT+LL  I   L+                   +  G QPF H      ++VL
Sbjct:   70 SLFIFPYKIIIKTCGTTKLLPSIEPLLRLAGELSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSVL 136
[Close]
BLAST of EY660210 vs. ExPASy Swiss-Prot
Match: DCAM1_BRAJU (S-adenosylmethionine decarboxylase proenzyme 1 OS=Brassica juncea GN=SAMDC1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 7.537e-21
Identity = 42/75 (56.00%), Postives = 51/75 (68.00%), Query Frame = 3 
Query:  534 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPANAQLFSSLSNEYPDSYVLSESKLFCVP 758
            + +SAIGFEG  +RLEVSFFEP +F D  G+GLR+LS     +   PA   + SSLSN+  DSYVLSES LF  P
Sbjct:    1 MSLSAIGFEGLRERLEVSFFEPSLFLDTHGKGLRALSKSQIDEILAPAECTIVSSLSNDELDSYVLSESSLFIFP 75

HSP 2 Score: 43.1282 bits (100), Expect = 7.537e-21
Identity = 22/55 (40.00%), Postives = 28/55 (50.91%), Query Frame = 1 
Query:  742 SSFVYPYKVIIKTCGTTRLLLFIPANLKXXXXXXXXXXXXXXXXXXXIFAGAQPF 906
            S F++PYK+IIKTCGTT+LLL I   L+                   +  G QPF
Sbjct:   70 SLFIFPYKIIIKTCGTTKLLLSIEPLLRLAGGVSLEVKSVRYTRGSFLCPGGQPF 124
[Close]
BLAST of EY660210 vs. ExPASy Swiss-Prot
Match: DCAM_ORYSJ (S-adenosylmethionine decarboxylase proenzyme OS=Oryza sativa subsp. japonica GN=SAMDC PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.787e-21
Identity = 44/71 (61.97%), Postives = 50/71 (70.42%), Query Frame = 3 
Query:  537 PVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPANAQLFSSLSNEYPDSYVLSESKLF 749
            PVSAIGFEGYEKRLE++F E  VFADP GRGLR+LS        + A   + S LSN+  DSYVLSES LF
Sbjct:   11 PVSAIGFEGYEKRLEITFSEAPVFADPDGRGLRALSRAQIDSVLDLARCTIVSELSNKDFDSYVLSESSLF 81

HSP 2 Score: 40.817 bits (94), Expect = 9.787e-21
Identity = 22/54 (40.74%), Postives = 27/54 (50.00%), Query Frame = 1 
Query:  742 SSFVYPYKVIIKTCGTTRLLLFIPANLKXXXXXXXXXXXXXXXXXXXIFAGAQP 903
            S F+Y  K++IKTCGTT+LLL IP  L+                   IF  AQP
Sbjct:   79 SLFIYSDKIVIKTCGTTKLLLTIPRILELAEGLSMPLAAVKYSRGMFIFPSAQP 132
[Close]
BLAST of EY660210 vs. ExPASy Swiss-Prot
Match: DCAM_ORYSI (S-adenosylmethionine decarboxylase proenzyme OS=Oryza sativa subsp. indica GN=SAMDC PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 9.787e-21
Identity = 44/71 (61.97%), Postives = 50/71 (70.42%), Query Frame = 3 
Query:  537 PVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPANAQLFSSLSNEYPDSYVLSESKLF 749
            PVSAIGFEGYEKRLE++F E  VFADP GRGLR+LS        + A   + S LSN+  DSYVLSES LF
Sbjct:   11 PVSAIGFEGYEKRLEITFSEAPVFADPDGRGLRALSRAQIDSVLDLARCTIVSELSNKDFDSYVLSESSLF 81

HSP 2 Score: 40.817 bits (94), Expect = 9.787e-21
Identity = 22/54 (40.74%), Postives = 27/54 (50.00%), Query Frame = 1 
Query:  742 SSFVYPYKVIIKTCGTTRLLLFIPANLKXXXXXXXXXXXXXXXXXXXIFAGAQP 903
            S F+Y  K++IKTCGTT+LLL IP  L+                   IF  AQP
Sbjct:   79 SLFIYSDKIVIKTCGTTKLLLTIPRILELAEGLSMPLAAVKYSRGMFIFPSAQP 132
The following BLAST results are available for this feature:
BLAST of EY660210 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
DCAM2_BRAJU5.429e-2260.00S-adenosylmethionine decarboxylase proenzyme 2 OS=... [more]
DCAM1_BRAJU7.537e-2156.00S-adenosylmethionine decarboxylase proenzyme 1 OS=... [more]
DCAM_ORYSJ9.787e-2161.97S-adenosylmethionine decarboxylase proenzyme OS=Or... [more]
DCAM_ORYSI9.787e-2161.97S-adenosylmethionine decarboxylase proenzyme OS=Or... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-G02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660210 ID=EY660210; Name=EY660210; organism=Citrus sinensis; type=EST; length=944bp
CCACGCGTCCGCGGACGCGTGGGCGGACGGAAGGAAATCGAAATTCGTTT
TGTGAAACAGAGTTAAAAATCAACCCTTCTTTAATCCTCAAGGAATTTTA
TTATTTTTTTGGTCTCTGAATCGAGGGTTTTGCTTCTTGGTTTAGTGGGT
TTGTTTTCGTTATATTATCTGAGAAAGGCTGAATGATCTAATGGAGTCAA
AAGGTGGTAAGAAGAAGTCTAGCAGTAGTTCCTTATTCTACGAAGCTCCT
CTTGGTTACAGCATTGAAGACGTTCGACCTCACGGTGGCATAAAGAAGTT
CAGATCAGCTGCTTACTCAAACTGCGTCCGCAAACCATCCTGAGATCGTC
CAATTTGTCCCATACCCCCCCAAAAAAAAGCTCACTACTACTGCAATTTT
AATTTTTTTTAGTTTTAGCCGTCTTAATACTGCAATTTACTTGGCCTATT
TCTTTTTCGACTTCCCTCGTTCTCTCGTTCTGCCCTCTTTGCTCTTTGCA
ATTGTCATTTGTTTTCTGTAAGGCAAGATGGCCTTGCCAGTCTCTGCAAT
TGGATTTGAAGGTTATGAAAAGAGGCTTGAAGTTTCCTTTTTTGAGCCTG
GTGTCTTTGCTGATCCTGGAGGTAGGGGCCTCCGCTCTCTGTCAAACATC
AATTGGATGAAATACTGAAACCCTGCGAATGCACAATTGTTTTCTTCGTT
GTCAAATGAATATCCTGATTCATATGTCCTCTCAGAATCAAAGCTCTTTT
GTGTACCCTTACAAGGTTATTATCAAAACTTGTGGGACTACCAGGCTGCT
TCTTTTCATCCCTGCCAATCTCAAGTTATCTGAGTCCCTCTCGTTGGCTG
GTCGATCTGGGAGATCCACTCGGGGAAGCTCCATATTTGCTGGGGCTCAG
CCATTTCACAACGAACTTCTCTTAGGAATAACTGTCCTGATGGA
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