EY660209

Overview
NameEY660209
Unique NameEY660209
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660209 vs. ExPASy Swiss-Prot
Match: XTH11_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 11 OS=Arabidopsis thaliana GN=XTH11 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.145e-27
Identity = 65/152 (42.76%), Postives = 90/152 (59.21%), Query Frame = 3
Query:  177 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFP 632
            T+  ++  TW    L  I     +QL LD+NSG GF S+  Y  G  +++IK     S G +T+FY+ S +    DEL F+ LG + G PY + TN+Y  G+G ++QR  LWFDP  DYH Y+ LWN + +VFYVDD PIRVY  +    +P
Sbjct:   23 TWGNNYYQTWGHQAL-VINKTSELQLTLDKNSGSGFESQLIYGSGYFNVRIKAPQTTSTGVITSFYLISRSSR-HDELCFQILG-KNGPPYLLNTNMYLYGEGGKDQRFRLWFDPTKDYHSYSFLWNPNQLVFYVDDTPIRVYSKNPDVYYP 171          
BLAST of EY660209 vs. ExPASy Swiss-Prot
Match: XTH33_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana GN=XTH33 PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 3.332e-27
Identity = 68/182 (37.36%), Postives = 101/182 (55.49%), Query Frame = 3
Query:  213 AHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENV---RDELDFEFLGNRTGQPYTVQTNIYANG--KGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNNPMGGVFNAGGSK*LGNQRWSRKINWNKLPFIL 737
            AH  Q+ G  A +L LD++SG G  SK +Y +G  S ++KL  G ++G V AFY+ SN E      DE+D E LG      +T+QTN+YANG  +  RE++   WFDP   +H YT++WN HH VF VD++P+R + N G   + +P + PM              +     +N+   PF++
Sbjct:   53 AHNIQVNGSLA-KLTLDKSSGAGLVSKNKYHYGFFSARLKLPAGFASGVVVAFYL-SNAETYPKSHDEIDIELLGRSRRDDWTIQTNVYANGSTRTGREEKFYFWFDPTQAFHDYTLIWNSHHTVFLVDNIPVRQFPNRGAFTSAYP-SKPMSLYVTVWDGSEWATKGGKYPVNYKYAPFVV 231          
BLAST of EY660209 vs. ExPASy Swiss-Prot
Match: CRR1_YEAST (Probable glycosidase CRR1 OS=Saccharomyces cerevisiae GN=CRR1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.164e-12
Identity = 49/136 (36.03%), Postives = 70/136 (51.47%), Query Frame = 3
Query:  183 LEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGD--REQRVNLWFDPAADYHLYTILWNHHHIVFYVD 584
            LEDF  T S     +   G  +  +  + +G    S R +L+G+ S+++K     S G VTAF +   T  + DE+DFE+LG   G   T Q+N Y+ G  D  R QR  +  D  A YH Y I W+   I++YVD
Sbjct:  148 LEDFDFTHSGYTSIEASSGNIVLAMPKKTTGSLITSTRSFLYGKASVRMKTAR--SRGVVTAFDL---TSAIGDEIDFEWLG---GDLMTAQSNYYSQGHLDYTRMQRFPVGADTWATYHTYEIDWDPDRIIWYVD 275          
The following BLAST results are available for this feature:
BLAST of EY660209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
XTH11_ARATH1.145e-2742.76Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH33_ARATH3.332e-2737.36Probable xyloglucan endotransglucosylase/hydrolase... [more]
CRR1_YEAST5.164e-1236.03Probable glycosidase CRR1 OS=Saccharomyces cerevis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-G01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660209 ID=EY660209; Name=EY660209; organism=Citrus sinensis; type=EST; length=901bp
TTCCCGACCCACGCGTCCGCACAACATATAATTAAAGATCTCTTTCTAAT
TAGTAACAGATAATATTTTATTGTACGGCTTGTTTTACAGCTATGGCTAT
CCTAAGAAATGCAATAGCATTATTTGTGTTGCTTTACTGTCTTGTATCCT
GCTCTTGCGTTTTAGGGCGACCGGCTACTTTTCTTGAGGATTTTAAAGTC
ACATGGTCCGATGCCCATCTCAGGCAAATCGAGGGAGGGAGGGCCATCCA
GCTAGTTCTAGACCAAAATTCAGGATGTGGGTTTGCCTCCAAAAGGCAGT
ACTTGTTCGGGCGTGTAAGCATGAAGATCAAGCTCGTTCCTGGAGACTCT
GCTGGAACTGTCACTGCATTTTATATGAATTCCAACACCGAAAATGTGAG
AGACGAGCTTGATTTTGAGTTCCTGGGAAACCGAACGGGTCAGCCTTACA
CGGTCCAGACCAATATCTATGCAAATGGAAAAGGCGATAGAGAACAGAGA
GTGAACCTCTGGTTTGACCCTGCTGCAGATTATCACCTTTACACTATTCT
CTGGAACCATCACCATATTGTCTTCTATGTGGATGATGTGCCCATCAGGG
TTTACAAAAACAGTGGAAGGGCTCCATTTCCAATGAACAACCCCATGGGG
GGTGTATTCAACGCTGGGGGAAGCAAATGACTGGGCAACCAGAGGTGGTC
TAGAAAAATAAATTGGAACAAGCTCCCTTTTATTCTTATTAAGAGACTTT
GATATTGAGGGCTGCCCAATCCTGGACCACAAATGTGGCTCCGACCCAGG
TAATGTGGGGAGGCAAAAATTTCCAGCCCTCCCGCCCTGGAAACAGAAGA
TACAAAGGGGTCCCCCCACCCCCTGACTCTTATTATTGCCGGAATAATCA
G
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