EY660207 | Citrus Genome Database

Overview


Name	EY660207
Unique Name	EY660207
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	917

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

BLAST of EY660207 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAE (Chaperone protein dnaJ OS=Staphylococcus aureus (strain Newman) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 6.858e-30
Identity = 68/144 (47.22%), Postives = 85/144 (59.03%), Query Frame = 1

Query:  361 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKDLS 792
            A  DYY  LG+ K AS  EIK AYRKL+++YHPD+NKE GA EKFKEIS AYEVLSDD KRA YDQ+G  G +   G G   +  + F  F                 G R R  +   KG+DL+Y + L F E++FG  K++S
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQ---GFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEIS 142

HSP 2 Score: 26.1794 bits (56), Expect = 6.858e-30
Identity = 11/26 (42.31%), Postives = 12/26 (46.15%), Query Frame = 2

Query:  806 TCEVXTGTGCKMGSKMXIXSTCGGTG 883
            TCE   G G K G+     S C G G
Sbjct:  148 TCETCHGDGAKPGTSKKTCSYCNGAG 173

BLAST of EY660207 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAC (Chaperone protein dnaJ OS=Staphylococcus aureus (strain COL) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 6.858e-30
Identity = 68/144 (47.22%), Postives = 85/144 (59.03%), Query Frame = 1

Query:  361 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKDLS 792
            A  DYY  LG+ K AS  EIK AYRKL+++YHPD+NKE GA EKFKEIS AYEVLSDD KRA YDQ+G  G +   G G   +  + F  F                 G R R  +   KG+DL+Y + L F E++FG  K++S
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQ---GFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEIS 142

HSP 2 Score: 26.1794 bits (56), Expect = 6.858e-30
Identity = 11/26 (42.31%), Postives = 12/26 (46.15%), Query Frame = 2

Query:  806 TCEVXTGTGCKMGSKMXIXSTCGGTG 883
            TCE   G G K G+     S C G G
Sbjct:  148 TCETCHGDGAKPGTSKKTCSYCNGAG 173

BLAST of EY660207 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAB (Chaperone protein dnaJ OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 6.858e-30
Identity = 68/144 (47.22%), Postives = 85/144 (59.03%), Query Frame = 1

Query:  361 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKDLS 792
            A  DYY  LG+ K AS  EIK AYRKL+++YHPD+NKE GA EKFKEIS AYEVLSDD KRA YDQ+G  G +   G G   +  + F  F                 G R R  +   KG+DL+Y + L F E++FG  K++S
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQ---GFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNASQKGDDLQYTMTLTFEEAVFGTTKEIS 142

HSP 2 Score: 26.1794 bits (56), Expect = 6.858e-30
Identity = 11/26 (42.31%), Postives = 12/26 (46.15%), Query Frame = 2

Query:  806 TCEVXTGTGCKMGSKMXIXSTCGGTG 883
            TCE   G G K G+     S C G G
Sbjct:  148 TCETCHGDGAKPGTSKKTCSYCNGAG 173

BLAST of EY660207 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA9 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain JH9) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 6.858e-30
Identity = 68/144 (47.22%), Postives = 85/144 (59.03%), Query Frame = 1

Query:  361 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKDLS 792
            A  DYY  LG+ K AS  EIK AYRKL+++YHPD+NKE GA EKFKEIS AYEVLSDD KRA YDQ+G  G +   G G   +  + F  F                 G R R  +   KG+DL+Y + L F E++FG  K++S
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQ---GFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEIS 142

HSP 2 Score: 26.1794 bits (56), Expect = 6.858e-30
Identity = 11/26 (42.31%), Postives = 12/26 (46.15%), Query Frame = 2

Query:  806 TCEVXTGTGCKMGSKMXIXSTCGGTG 883
            TCE   G G K G+     S C G G
Sbjct:  148 TCETCHGDGAKPGTSKKTCSYCNGAG 173

BLAST of EY660207 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA8 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain NCTC 8325) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 6.858e-30
Identity = 68/144 (47.22%), Postives = 85/144 (59.03%), Query Frame = 1

Query:  361 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKDLS 792
            A  DYY  LG+ K AS  EIK AYRKL+++YHPD+NKE GA EKFKEIS AYEVLSDD KRA YDQ+G  G +   G G   +  + F  F                 G R R  +   KG+DL+Y + L F E++FG  K++S
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQ---GFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEIS 142

HSP 2 Score: 26.1794 bits (56), Expect = 6.858e-30
Identity = 11/26 (42.31%), Postives = 12/26 (46.15%), Query Frame = 2

Query:  806 TCEVXTGTGCKMGSKMXIXSTCGGTG 883
            TCE   G G K G+     S C G G
Sbjct:  148 TCETCHGDGAKPGTSKKTCSYCNGAG 173

BLAST of EY660207 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA3 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain USA300) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 6.858e-30
Identity = 68/144 (47.22%), Postives = 85/144 (59.03%), Query Frame = 1

Query:  361 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKDLS 792
            A  DYY  LG+ K AS  EIK AYRKL+++YHPD+NKE GA EKFKEIS AYEVLSDD KRA YDQ+G  G +   G G   +  + F  F                 G R R  +   KG+DL+Y + L F E++FG  K++S
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQ---GFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEIS 142

HSP 2 Score: 26.1794 bits (56), Expect = 6.858e-30
Identity = 11/26 (42.31%), Postives = 12/26 (46.15%), Query Frame = 2

Query:  806 TCEVXTGTGCKMGSKMXIXSTCGGTG 883
            TCE   G G K G+     S C G G
Sbjct:  148 TCETCHGDGAKPGTSKKTCSYCNGAG 173

BLAST of EY660207 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA2 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain JH1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 6.858e-30
Identity = 68/144 (47.22%), Postives = 85/144 (59.03%), Query Frame = 1

Query:  361 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKDLS 792
            A  DYY  LG+ K AS  EIK AYRKL+++YHPD+NKE GA EKFKEIS AYEVLSDD KRA YDQ+G  G +   G G   +  + F  F                 G R R  +   KG+DL+Y + L F E++FG  K++S
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQ---GFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEIS 142

HSP 2 Score: 26.1794 bits (56), Expect = 6.858e-30
Identity = 11/26 (42.31%), Postives = 12/26 (46.15%), Query Frame = 2

Query:  806 TCEVXTGTGCKMGSKMXIXSTCGGTG 883
            TCE   G G K G+     S C G G
Sbjct:  148 TCETCHGDGAKPGTSKKTCSYCNGAG 173

BLAST of EY660207 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA1 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 6.858e-30
Identity = 68/144 (47.22%), Postives = 85/144 (59.03%), Query Frame = 1

Query:  361 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKDLS 792
            A  DYY  LG+ K AS  EIK AYRKL+++YHPD+NKE GA EKFKEIS AYEVLSDD KRA YDQ+G  G +   G G   +  + F  F                 G R R  +   KG+DL+Y + L F E++FG  K++S
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQ---GFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEIS 142

HSP 2 Score: 26.1794 bits (56), Expect = 6.858e-30
Identity = 11/26 (42.31%), Postives = 12/26 (46.15%), Query Frame = 2

Query:  806 TCEVXTGTGCKMGSKMXIXSTCGGTG 883
            TCE   G G K G+     S C G G
Sbjct:  148 TCETCHGDGAKPGTSKKTCSYCNGAG 173

BLAST of EY660207 vs. ExPASy Swiss-Prot
Match: DNAJ_STRMU (Chaperone protein dnaJ OS=Streptococcus mutans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 8.930e-30
Identity = 63/144 (43.75%), Postives = 89/144 (61.81%), Query Frame = 1

Query:  370 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGS--SAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKDLSF 795
            +YY  LGV K AS  EIK AYR+++++YHPD+NKEPGA EK+KEI  AY+ L D++KRA YDQYG AG     G GS  S + ++ F  FE                G  +R  +   +G+DL+Y + L+F E++FG EK++ +
Sbjct:    5 EYYDRLGVSKDASQDEIKKAYRRMSKKYHPDINKEPGAEEKYKEIQEAYDTLGDEQKRAAYDQYGPAGANGGFGDGSGFSGFDSSGFGGFEDIFSSFFG--------GGASRNPNAPRQGDDLQYRVNLQFEEAVFGTEKEVHY 140

HSP 2 Score: 28.8758 bits (63), Expect = 8.930e-30
Identity = 13/37 (35.14%), Postives = 17/37 (45.95%), Query Frame = 2

Query:  806 TCEVXTGTGCKMGSKMXIXSTCGGTGQSMRTDQTPXG 916
            +C    G+G K G+     S C G+G      QTP G
Sbjct:  145 SCHTCNGSGAKPGTSPVTCSKCHGSGVINMDTQTPLG 181

BLAST of EY660207 vs. ExPASy Swiss-Prot
Match: DNAJ_BACSK (Chaperone protein dnaJ OS=Bacillus clausii (strain KSM-K16) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.514e-29
Identity = 61/144 (42.36%), Postives = 84/144 (58.33%), Query Frame = 1

Query:  370 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPF-DLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKDLSFP 798
            DYY  LGV ++AS +E+K AYRKLAR+YHPDVNKE  A  KFKE+  AY+ LSD +K+A YDQ+G A      GG  ++     F D+F+                G   R  +   +G+DL+Y + LEF E++FG E ++  P
Sbjct:    5 DYYEVLGVDRNASVEEVKKAYRKLARKYHPDVNKEEDAEAKFKEVKEAYDTLSDPQKKARYDQFGHADPNQGFGGAGASGDFGGFSDIFDMFFGG-----------GGGRRNPNAPRQGDDLQYTMTLEFKEAVFGKETEIEIP 137

HSP 2 Score: 35.8094 bits (81), Expect = 1.514e-29
Identity = 17/38 (44.74%), Postives = 20/38 (52.63%), Query Frame = 2

Query:  803 ETCEVXTGTGCKMGSKMXIXSTCGGTGQSMRTDQTPXG 916
            ETC    G+G K G+K    S CGG+GQ      TP G
Sbjct:  140 ETCGTCHGSGAKPGTKPDTCSHCGGSGQLNVEQNTPFG 177

The following BLAST results are available for this feature:

BLAST of EY660207 vs. ExPASy Swiss-Prot

BLAST of EY660207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
DNAJ_STAAE	6.858e-30	47.22	Chaperone protein dnaJ OS=Staphylococcus aureus (s...	[more]
DNAJ_STAAC	6.858e-30	47.22	Chaperone protein dnaJ OS=Staphylococcus aureus (s...	[more]
DNAJ_STAAB	6.858e-30	47.22	Chaperone protein dnaJ OS=Staphylococcus aureus (s...	[more]
DNAJ_STAA9	6.858e-30	47.22	Chaperone protein dnaJ OS=Staphylococcus aureus (s...	[more]
DNAJ_STAA8	6.858e-30	47.22	Chaperone protein dnaJ OS=Staphylococcus aureus (s...	[more]
DNAJ_STAA3	6.858e-30	47.22	Chaperone protein dnaJ OS=Staphylococcus aureus (s...	[more]
DNAJ_STAA2	6.858e-30	47.22	Chaperone protein dnaJ OS=Staphylococcus aureus (s...	[more]
DNAJ_STAA1	6.858e-30	47.22	Chaperone protein dnaJ OS=Staphylococcus aureus (s...	[more]
DNAJ_STRMU	8.930e-30	43.75	Chaperone protein dnaJ OS=Streptococcus mutans GN=...	[more]
DNAJ_BACSK	1.514e-29	42.36	Chaperone protein dnaJ OS=Bacillus clausii (strain...	[more]

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Properties


Property Name	Value
Genbank description	CS00-C1-101-019-F11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY660207 ID=EY660207; Name=EY660207; organism=Citrus sinensis; type=EST; length=917bp
TTCGTCGACCCACGCGTCCGCTCACTTAATCAGATAGCTGAAAAACCAAA
AGTCATGACGGAAACAGAACATTTCTACTACTCAATTTCTTGATTTTACT
CTTAGAGACAATTCATCAAACACTTGGTTTGGCTTGCGATGGTTTCCACC
GCAACGACTCTCACTCTCCTTCCCCATCCTTCTCTCAGCTTCTCCCATTC
TTCATCTTCTTCGTTCCTAGCTGGTGGGACCCACCTCAGGTCCCACAAGA
ACTTCGCTGCTTTGACGTTAAGTGCTGATTCTTGTCCTTTTGGAGGTTCG
AAGTTGAATAGTAGTAATGCAAGATCCTCTACGTACCGTTTTGGCCGTTC
GGTGGTTTGTGCTTCTGGGGATTACTACGCCACTCTTGGAGTCCCCAAGT
CTGCCAGTGGCAAAGAGATTAAAGCGGCTTATCGAAAATTAGCTCGTCAG
TACCACCCTGATGTCAACAAGGAACCTGGAGCAACAGAAAAGTTTAAGGA
GATTAGTGCTGCCTATGAGGTGCTATCAGACGATAAAAAGAGGGCTATGT
ACGATCAATATGGTGAAGCTGGAGTCAAAAGCACTGTAGGCGGAGGATCA
AGTGCTTATACGACTAATCCTTTTGATCTGTTTGAGACGTTCTTTGGACC
AAGTATGGGTGGTTTTCCTGGTATGAACCAAACTGGATTTAGAACACGCC
GGCGTAGTACTGTTACCAAGGGTGAAGATTTACGTTATGACATTGTGTTG
GAGTTTTCTGAGTCTATCTTTGGGGCTGAAAAAGATTTGAGCTTTCCCAC
TTGAAACATGTGAAGTTNGTACTGGTACTGGNTGCAAGATGGGCTCCAAG
ATGANGATATGNTCAACTTGTGGTGGCACGGGTCAAAGTATGAGAACTGA
TCAAACTCCGNTTGGCT