EY660207 | Citrus Genome Database

Overview


Name	EY660207
Unique Name	EY660207
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	917

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

BLAST of EY660207 vs. ExPASy Swiss-Prot
Match: DNAJ_BACCZ (Chaperone protein dnaJ OS=Bacillus cereus (strain ZK / E33L) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 7.376e-29
Identity = 67/147 (45.58%), Postives = 85/147 (57.82%), Query Frame = 1

Query:  370 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGG-GSSAYTTNPF---DLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKDLSFP 798
            DYY  LG+ K AS  EIK AYR+LA++YHPDV+KE  A EKFKE+  AYEVLSDD+KRA YDQ+G AG     GG G        F   D+F +               G R R  +   +G DL+Y + L+F E+IFG E ++  P
Sbjct:    5 DYYEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQFGHAGANQGFGGFGGGGDFGGGFGFEDIFSSFFGGG----------GGRRRDPNAPRQGADLQYQVTLDFEEAIFGKELNVEIP 141

HSP 2 Score: 29.261 bits (64), Expect = 7.376e-29
Identity = 12/38 (31.58%), Postives = 17/38 (44.74%), Query Frame = 2

Query:  803 ETCEVXTGTGCKMGSKMXIXSTCGGTGQSMRTDQTPXG 916
            + C+   G+G K G+       C G+GQ      TP G
Sbjct:  144 DPCDTCKGSGAKPGTSKETCKHCSGSGQVSVEQNTPFG 181

BLAST of EY660207 vs. ExPASy Swiss-Prot
Match: DNAJ_BACCR (Chaperone protein dnaJ OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 7.376e-29
Identity = 67/147 (45.58%), Postives = 85/147 (57.82%), Query Frame = 1

Query:  370 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGG-GSSAYTTNPF---DLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKDLSFP 798
            DYY  LG+ K AS  EIK AYR+LA++YHPDV+KE  A EKFKE+  AYEVLSDD+KRA YDQ+G AG     GG G        F   D+F +               G R R  +   +G DL+Y + L+F E+IFG E ++  P
Sbjct:    5 DYYEVLGLSKGASTDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQFGHAGANQGFGGFGGGGDFGGGFGFEDIFSSFFGGG----------GGRRRDPNAPRQGADLQYQVTLDFEEAIFGKELNVEIP 141

HSP 2 Score: 29.261 bits (64), Expect = 7.376e-29
Identity = 12/38 (31.58%), Postives = 17/38 (44.74%), Query Frame = 2

Query:  803 ETCEVXTGTGCKMGSKMXIXSTCGGTGQSMRTDQTPXG 916
            + C+   G+G K G+       C G+GQ      TP G
Sbjct:  144 DPCDTCKGSGAKPGTSKETCKHCSGSGQVSVEQNTPFG 181

BLAST of EY660207 vs. ExPASy Swiss-Prot
Match: DNAJ_BACCQ (Chaperone protein dnaJ OS=Bacillus cereus (strain Q1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 7.376e-29
Identity = 67/147 (45.58%), Postives = 85/147 (57.82%), Query Frame = 1

Query:  370 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGG-GSSAYTTNPF---DLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKDLSFP 798
            DYY  LG+ K AS  EIK AYR+LA++YHPDV+KE  A EKFKE+  AYEVLSDD+KRA YDQ+G AG     GG G        F   D+F +               G R R  +   +G DL+Y + L+F E+IFG E ++  P
Sbjct:    5 DYYEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQFGHAGANQGFGGFGGGGDFGGGFGFEDIFSSFFGGG----------GGRRRDPNAPRQGADLQYQVTLDFEEAIFGKELNVEIP 141

HSP 2 Score: 29.261 bits (64), Expect = 7.376e-29
Identity = 12/38 (31.58%), Postives = 17/38 (44.74%), Query Frame = 2

Query:  803 ETCEVXTGTGCKMGSKMXIXSTCGGTGQSMRTDQTPXG 916
            + C+   G+G K G+       C G+GQ      TP G
Sbjct:  144 DPCDTCKGSGAKPGTSKETCKHCSGSGQVSVEQNTPFG 181

BLAST of EY660207 vs. ExPASy Swiss-Prot
Match: DNAJ_BACC7 (Chaperone protein dnaJ OS=Bacillus cereus (strain AH187) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 7.376e-29
Identity = 67/147 (45.58%), Postives = 85/147 (57.82%), Query Frame = 1

Query:  370 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGG-GSSAYTTNPF---DLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKDLSFP 798
            DYY  LG+ K AS  EIK AYR+LA++YHPDV+KE  A EKFKE+  AYEVLSDD+KRA YDQ+G AG     GG G        F   D+F +               G R R  +   +G DL+Y + L+F E+IFG E ++  P
Sbjct:    5 DYYEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQFGHAGANQGFGGFGGGGDFGGGFGFEDIFSSFFGGG----------GGRRRDPNAPRQGADLQYQVTLDFEEAIFGKELNVEIP 141

HSP 2 Score: 29.261 bits (64), Expect = 7.376e-29
Identity = 12/38 (31.58%), Postives = 17/38 (44.74%), Query Frame = 2

Query:  803 ETCEVXTGTGCKMGSKMXIXSTCGGTGQSMRTDQTPXG 916
            + C+   G+G K G+       C G+GQ      TP G
Sbjct:  144 DPCDTCKGSGAKPGTSKETCKHCSGSGQVSVEQNTPFG 181

BLAST of EY660207 vs. ExPASy Swiss-Prot
Match: DNAJ_BACC4 (Chaperone protein dnaJ OS=Bacillus cereus (strain B4264) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 7.376e-29
Identity = 67/147 (45.58%), Postives = 85/147 (57.82%), Query Frame = 1

Query:  370 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGG-GSSAYTTNPF---DLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKDLSFP 798
            DYY  LG+ K AS  EIK AYR+LA++YHPDV+KE  A EKFKE+  AYEVLSDD+KRA YDQ+G AG     GG G        F   D+F +               G R R  +   +G DL+Y + L+F E+IFG E ++  P
Sbjct:    5 DYYEVLGLSKGASTDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQFGHAGANQGFGGFGGGGDFGGGFGFEDIFSSFFGGG----------GGRRRDPNAPRQGADLQYQVTLDFEEAIFGKELNVEIP 141

HSP 2 Score: 29.261 bits (64), Expect = 7.376e-29
Identity = 12/38 (31.58%), Postives = 17/38 (44.74%), Query Frame = 2

Query:  803 ETCEVXTGTGCKMGSKMXIXSTCGGTGQSMRTDQTPXG 916
            + C+   G+G K G+       C G+GQ      TP G
Sbjct:  144 DPCDTCKGSGAKPGTSKETCKHCSGSGQVSVEQNTPFG 181

BLAST of EY660207 vs. ExPASy Swiss-Prot
Match: DNAJ_BACC3 (Chaperone protein dnaJ OS=Bacillus cereus (strain 03BB102) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 7.376e-29
Identity = 67/147 (45.58%), Postives = 85/147 (57.82%), Query Frame = 1

Query:  370 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGG-GSSAYTTNPF---DLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKDLSFP 798
            DYY  LG+ K AS  EIK AYR+LA++YHPDV+KE  A EKFKE+  AYEVLSDD+KRA YDQ+G AG     GG G        F   D+F +               G R R  +   +G DL+Y + L+F E+IFG E ++  P
Sbjct:    5 DYYEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQFGHAGANQGFGGFGGGGDFGGGFGFEDIFSSFFGGG----------GGRRRDPNAPRQGADLQYQVTLDFEEAIFGKELNVEIP 141

HSP 2 Score: 29.261 bits (64), Expect = 7.376e-29
Identity = 12/38 (31.58%), Postives = 17/38 (44.74%), Query Frame = 2

Query:  803 ETCEVXTGTGCKMGSKMXIXSTCGGTGQSMRTDQTPXG 916
            + C+   G+G K G+       C G+GQ      TP G
Sbjct:  144 DPCDTCKGSGAKPGTSKETCKHCSGSGQVSVEQNTPFG 181

BLAST of EY660207 vs. ExPASy Swiss-Prot
Match: DNAJ_BACC2 (Chaperone protein dnaJ OS=Bacillus cereus (strain G9842) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 7.376e-29
Identity = 67/147 (45.58%), Postives = 85/147 (57.82%), Query Frame = 1

Query:  370 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGG-GSSAYTTNPF---DLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKDLSFP 798
            DYY  LG+ K AS  EIK AYR+LA++YHPDV+KE  A EKFKE+  AYEVLSDD+KRA YDQ+G AG     GG G        F   D+F +               G R R  +   +G DL+Y + L+F E+IFG E ++  P
Sbjct:    5 DYYEVLGLSKGASTDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQFGHAGANQGFGGFGGGGDFGGGFGFEDIFSSFFGGG----------GGRRRDPNAPRQGADLQYQVTLDFEEAIFGKELNVEIP 141

HSP 2 Score: 29.261 bits (64), Expect = 7.376e-29
Identity = 12/38 (31.58%), Postives = 17/38 (44.74%), Query Frame = 2

Query:  803 ETCEVXTGTGCKMGSKMXIXSTCGGTGQSMRTDQTPXG 916
            + C+   G+G K G+       C G+GQ      TP G
Sbjct:  144 DPCDTCKGSGAKPGTSKETCKHCSGSGQVSVEQNTPFG 181

BLAST of EY660207 vs. ExPASy Swiss-Prot
Match: DNAJ_BACC1 (Chaperone protein dnaJ OS=Bacillus cereus (strain ATCC 10987) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 7.376e-29
Identity = 67/147 (45.58%), Postives = 85/147 (57.82%), Query Frame = 1

Query:  370 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGG-GSSAYTTNPF---DLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKDLSFP 798
            DYY  LG+ K AS  EIK AYR+LA++YHPDV+KE  A EKFKE+  AYEVLSDD+KRA YDQ+G AG     GG G        F   D+F +               G R R  +   +G DL+Y + L+F E+IFG E ++  P
Sbjct:    5 DYYEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQFGHAGANQGFGGFGGGGDFGGGFGFEDIFSSFFGGG----------GGRRRDPNAPRQGADLQYQVTLDFEEAIFGKELNVEIP 141

HSP 2 Score: 29.261 bits (64), Expect = 7.376e-29
Identity = 12/38 (31.58%), Postives = 17/38 (44.74%), Query Frame = 2

Query:  803 ETCEVXTGTGCKMGSKMXIXSTCGGTGQSMRTDQTPXG 916
            + C+   G+G K G+       C G+GQ      TP G
Sbjct:  144 DPCDTCKGSGAKPGTSKETCKHCSGSGQVSVEQNTPFG 181

BLAST of EY660207 vs. ExPASy Swiss-Prot
Match: DNAJ_STRU0 (Chaperone protein dnaJ OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.601e-29
Identity = 63/143 (44.06%), Postives = 86/143 (60.14%), Query Frame = 1

Query:  370 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGS-SAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKDLSF 795
            ++Y  LGV K AS  EIK AYRK++++YHPD+NKEPGA +K+K++  AYE LSD +KR+ YDQYG AG +   GGG    +    F  FE                G   R  +   +G+DL+Y + L F E+IFG EKD+S+
Sbjct:    5 EFYDRLGVSKDASQDEIKKAYRKMSKKYHPDINKEPGAEQKYKDVQEAYETLSDAQKRSAYDQYGAAGAQGGFGGGGFGGFDGGGFGGFEDIFSSFFGG-------GGGMRNPNAPRQGDDLQYRVNLTFEEAIFGVEKDVSY 140

HSP 2 Score: 28.1054 bits (61), Expect = 9.601e-29
Identity = 13/37 (35.14%), Postives = 16/37 (43.24%), Query Frame = 2

Query:  806 TCEVXTGTGCKMGSKMXIXSTCGGTGQSMRTDQTPXG 916
            TC    G+G K G+       C G+G      QTP G
Sbjct:  145 TCHTCAGSGAKPGTSPVTCGRCHGSGVINVDTQTPLG 181

BLAST of EY660207 vs. ExPASy Swiss-Prot
Match: DNAJ_STAES (Chaperone protein dnaJ OS=Staphylococcus epidermidis (strain ATCC 12228) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.070e-28
Identity = 70/144 (48.61%), Postives = 89/144 (61.81%), Query Frame = 1

Query:  361 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKDLS 792
            A  DYY  LGV KSAS  EIK AYRKL+++YHPD+NKE GA EKFKEIS AYEVLSD+ KRA YDQ+G  G +   G GS  +  + F  FE                G R R  +   KG+DL+Y + + F E++FG +K++S
Sbjct:    2 AKRDYYEVLGVNKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKRANYDQFGHDGPQG--GFGSQGFGGSDFGGFEDIFSSFFGG-------GSRQRDPNAPRKGDDLQYTMTITFEEAVFGTKKEIS 136

The following BLAST results are available for this feature:

BLAST of EY660207 vs. ExPASy Swiss-Prot

BLAST of EY660207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
DNAJ_BACCZ	7.376e-29	45.58	Chaperone protein dnaJ OS=Bacillus cereus (strain ...	[more]
DNAJ_BACCR	7.376e-29	45.58	Chaperone protein dnaJ OS=Bacillus cereus (strain ...	[more]
DNAJ_BACCQ	7.376e-29	45.58	Chaperone protein dnaJ OS=Bacillus cereus (strain ...	[more]
DNAJ_BACC7	7.376e-29	45.58	Chaperone protein dnaJ OS=Bacillus cereus (strain ...	[more]
DNAJ_BACC4	7.376e-29	45.58	Chaperone protein dnaJ OS=Bacillus cereus (strain ...	[more]
DNAJ_BACC3	7.376e-29	45.58	Chaperone protein dnaJ OS=Bacillus cereus (strain ...	[more]
DNAJ_BACC2	7.376e-29	45.58	Chaperone protein dnaJ OS=Bacillus cereus (strain ...	[more]
DNAJ_BACC1	7.376e-29	45.58	Chaperone protein dnaJ OS=Bacillus cereus (strain ...	[more]
DNAJ_STRU0	9.601e-29	44.06	Chaperone protein dnaJ OS=Streptococcus uberis (st...	[more]
DNAJ_STAES	1.070e-28	48.61	Chaperone protein dnaJ OS=Staphylococcus epidermid...	[more]

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Properties


Property Name	Value
Genbank description	CS00-C1-101-019-F11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY660207 ID=EY660207; Name=EY660207; organism=Citrus sinensis; type=EST; length=917bp
TTCGTCGACCCACGCGTCCGCTCACTTAATCAGATAGCTGAAAAACCAAA
AGTCATGACGGAAACAGAACATTTCTACTACTCAATTTCTTGATTTTACT
CTTAGAGACAATTCATCAAACACTTGGTTTGGCTTGCGATGGTTTCCACC
GCAACGACTCTCACTCTCCTTCCCCATCCTTCTCTCAGCTTCTCCCATTC
TTCATCTTCTTCGTTCCTAGCTGGTGGGACCCACCTCAGGTCCCACAAGA
ACTTCGCTGCTTTGACGTTAAGTGCTGATTCTTGTCCTTTTGGAGGTTCG
AAGTTGAATAGTAGTAATGCAAGATCCTCTACGTACCGTTTTGGCCGTTC
GGTGGTTTGTGCTTCTGGGGATTACTACGCCACTCTTGGAGTCCCCAAGT
CTGCCAGTGGCAAAGAGATTAAAGCGGCTTATCGAAAATTAGCTCGTCAG
TACCACCCTGATGTCAACAAGGAACCTGGAGCAACAGAAAAGTTTAAGGA
GATTAGTGCTGCCTATGAGGTGCTATCAGACGATAAAAAGAGGGCTATGT
ACGATCAATATGGTGAAGCTGGAGTCAAAAGCACTGTAGGCGGAGGATCA
AGTGCTTATACGACTAATCCTTTTGATCTGTTTGAGACGTTCTTTGGACC
AAGTATGGGTGGTTTTCCTGGTATGAACCAAACTGGATTTAGAACACGCC
GGCGTAGTACTGTTACCAAGGGTGAAGATTTACGTTATGACATTGTGTTG
GAGTTTTCTGAGTCTATCTTTGGGGCTGAAAAAGATTTGAGCTTTCCCAC
TTGAAACATGTGAAGTTNGTACTGGTACTGGNTGCAAGATGGGCTCCAAG
ATGANGATATGNTCAACTTGTGGTGGCACGGGTCAAAGTATGAGAACTGA
TCAAACTCCGNTTGGCT