EY660205

Overview
NameEY660205
Unique NameEY660205
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length909
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7555 contig Csv1_Contig7555:65..976. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY660205 vs. ExPASy Swiss-Prot
Match: LAX4_MEDTR (Auxin transporter-like protein 4 OS=Medicago truncatula GN=LAX4 PE=2 SV=1)

HSP 1 Score: 390.578 bits (1002), Expect = 6.667e-108
Identity = 187/253 (73.91%), Postives = 206/253 (81.42%), Query Frame = 3
Query:  135 FFWHGGSVYDAWFSCASNQVAQVLLTLPYXXXXXXXXXXXXXXXXXXXMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLIMTSFTAWYLTIASLVHGQGEGVKHSGPTKMVLYFTGATNILYTFGGHAVTVEIMHAMWEAQNSSQFTWWHTLCV-NSNFTSASAVYWAFGD 890
            F WHGGSV+DAWFSCASNQVAQVLLTLPY                   +GSWTAYLIS+LYVEYR RKE+E V+F+NHVIQWFEVLDGLLG++W+ +GL FNCTFLLFGSVIQLIACASNIYYIND LDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGL MT++TAWY+ IA++V+GQ E V HSGPTK+VLYFTGATNILYTFGGHAVTVEIMHAMW+ Q      +  TL V      SA AVYWAFGD
Sbjct:   41 FLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMVSGIVFQIFYGLIGSWTAYLISVLYVEYRARKEKENVNFKNHVIQWFEVLDGLLGRYWKALGLAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYMAIAAIVNGQIENVVHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYFLATLYVFTLTIPSAVAVYWAFGD 293          
BLAST of EY660205 vs. ExPASy Swiss-Prot
Match: LAX2_ORYSJ (Auxin transporter-like protein 2 OS=Oryza sativa subsp. japonica GN=Os05g0447200 PE=2 SV=1)

HSP 1 Score: 388.652 bits (997), Expect = 2.533e-107
Identity = 188/251 (74.90%), Postives = 202/251 (80.48%), Query Frame = 3
Query:  141 WHGGSVYDAWFSCASNQVAQVLLTLPYXXXXXXXXXXXXXXXXXXXMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLIMTSFTAWYLTIASLVHGQGEGVKHSGPTKMVLYFTGATNILYTFGGHAVTVEIMHAMWEAQNSSQFTWWHTLCV-NSNFTSASAVYWAFGD 890
            WHGGSV+DAWFSCASNQVAQVLLTLPY                   MGSWTAYLIS+LYVEYR RKE+E V F+NHVIQWFEVLDGLLG +W+  GL FNCTFLLFGSVIQLIACASNIYYIND LDKRTWTYIFGACC+TTVFIPSFHNYRIWSFLGL MT++TAWYL IA+ VHGQ +GV HSGP+KMVLYFTGATNILYTFGGHAVTVEIMHAMW+ Q         TL V      SASA+YWAFGD
Sbjct:   42 WHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGLLLQVFYGLMGSWTAYLISVLYVEYRARKEKEGVSFKNHVIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYIFGACCSTTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAAAVHGQVDGVTHSGPSKMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLVATLYVFTLTLPSASAMYWAFGD 292          
BLAST of EY660205 vs. ExPASy Swiss-Prot
Match: LAX1_ORYSJ (Auxin transporter-like protein 1 OS=Oryza sativa subsp. japonica GN=Os01g0856500 PE=2 SV=2)

HSP 1 Score: 387.882 bits (995), Expect = 4.321e-107
Identity = 187/254 (73.62%), Postives = 208/254 (81.89%), Query Frame = 3
Query:  141 WHGGSVYDAWFSCASNQVAQVLLTLPYXXXXXXXXXXXXXXXXXXXMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLIMTSFTAWYLTIASLVHGQGEGVKHSGPTKMVLYFTGATNILYTFGGHAVTVEIMHAMWEAQNSSQFTWWHTLCVNSNFT----SASAVYWAFGD 890
            WHGGSV+DAWFSCASNQVAQVLLTLPY                   MGSWTAYLIS+LYVEYR+RKE+E V F+NHVIQWFEVLDGLLG +W+  GL FNCTFLLFGSVIQLIACASNIYYIND LDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGL MT++TAWYL IA+L++GQ EG+ H+GPTK+VLYFTGATNILYTFGGHAVTVEIMHAMW+    ++F + + L     FT    SASA+YWAFGD
Sbjct:   51 WHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGVLLQLFYGFMGSWTAYLISVLYVEYRSRKEKEGVSFKNHVIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAALLNGQAEGITHTGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWK---PAKFKYIYLLATLYVFTLTLPSASAMYWAFGD 301          
The following BLAST results are available for this feature:
BLAST of EY660205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
LAX4_MEDTR6.667e-10873.91Auxin transporter-like protein 4 OS=Medicago trunc... [more]
LAX2_ORYSJ2.533e-10774.90Auxin transporter-like protein 2 OS=Oryza sativa s... [more]
LAX1_ORYSJ4.321e-10773.62Auxin transporter-like protein 1 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-F09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660205 ID=EY660205; Name=EY660205; organism=Citrus sinensis; type=EST; length=909bp
CACGCGTCCGGTATATACTTATCAGTGCTATAGCAATGGCGTCAGAGAAA
GTTGAGACTGTTGTAGCTGGAAACTACATTGAAATGGAAAGAGAAGAGGA
GGATTCCAAGTCTTCCAAGAGCAAACTTTCAAGCTTCTTTTGGCATGGTG
GTTCAGTTTATGATGCATGGTTTAGCTGTGCTTCTAACCAGGTCGCACAA
GTGCTACTCACACTGCCATATTCATTTTCACAACTTGGGTTGTTATCTGG
GATTCTACTTCAGCTGTTTTATGGGTTAATGGGAAGCTGGACTGCTTATC
TTATAAGCATACTTTATGTTGAGTACAGAACTAGAAAGGAGAGAGAAAAG
GTTGATTTCAGGAATCACGTAATTCAGTGGTTTGAAGTTCTTGATGGGCT
ACTGGGGAAGCACTGGAGGAATATAGGCCTATTTTTCAACTGCACTTTTC
TGCTATTTGGATCCGTAATCCAGTTAATCGCCTGTGCAAGCAACATATAC
TACATAAATGACAATTTGGACAAGAGAACTTGGACCTACATCTTTGGAGC
ATGTTGTGCGACAACTGTGTTCATCCCTTCATTCCATAATTACAGAATTT
GGTCGTTTTTAGGCCTTATAATGACTTCCTTCACCGCATGGTATCTCACC
ATTGCTTCCCTTGTGCATGGACAGGGTGAGGGAGTGAAGCACTCCGGCCC
AACCAAAATGGTTCTCTATTTTACAGGAGCTACTAACATTCTCTACACCT
TTGGCGGACATGCTGTCACAGTGGAGATCATGCATGCAATGTGGGAAGCA
CAAAATTCAAGTCAATTTACTTGGTGGCACACTTTATGTGTTAACTCTAA
CTTTACATCAGCTTCTGCTGTATATTGGGCTTTTGGAGACTGCTTCTCAC
TCATCCATG
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