EY660204
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660204 vs. ExPASy Swiss-Prot
Match: PGLR4_ARATH (Polygalacturonase At1g48100 OS=Arabidopsis thaliana GN=At1g48100 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 4.445e-42 Identity = 87/216 (40.28%), Postives = 122/216 (56.48%), Query Frame = 1 Query: 175 SKSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGL-NRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCK-------INTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASRGGEVKNSIVGTGDDCISI 798 S S V V FGA GDG DDT AF +AWK AC+ + ++ G F I SGPCK L ++ G ++ P P+ W N+ +WL F R++ T G GT+ G GQ+WW CK +++ PC +PT I F N++V+ LR+ NS Q H+ F C V+I+ +++ +P SPNTDGIH+ +R + NS+V GDDCISI Sbjct: 74 SDSGCVFDVTSFGAVGDGSCDDTAAFQDAWKAACAVESGV-VLAPEGGVFKITSTIFSGPCKPGLVFQLDGVLMPPDGPEEWPEKDNKNQWLVFYRLDGFTFSGKGTVEGNGQKWWDLPCKPHRGPDGSSSSGPCA-SPTMIRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINEIQISSPKLSPNTDGIHLGNTRSVGIYNSVVSNGDDCISI 287 HSP 2 Score: 26.9498 bits (58), Expect = 4.445e-42 Identity = 11/18 (61.11%), Postives = 12/18 (66.67%), Query Frame = 2 Query: 821 IRNFACGAXHGYSIGSLG 874 I+ CG HG SIGSLG Sbjct: 296 IQGVTCGPSHGISIGSLG 313
BLAST of EY660204 vs. ExPASy Swiss-Prot
Match: PGLR3_ARATH (Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana GN=At3g15720 PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 5.210e-40 Identity = 82/217 (37.79%), Postives = 119/217 (54.84%), Query Frame = 1 Query: 181 SKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSR-LTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASRGGEVKNSIVGTGDDCISI---XGNLHXS 819 S + V FGA GDG DD++AF AW+ CS + V AG TF++ P+ G CKS + +++ G +VAP + WKG ++ +W+ F + L ++G G ING G WW PTA+ F C NL++ L ++S HI + C V IS+L++ AP SPNTDGI + AS +++ I+ TGDDCI+I N+H S Sbjct: 20 SSNALDVTQFGAVGDGVTDDSQAFLKAWEAVCSGTGDGQFVVPAGMTFMLQPLKFQGSCKSTPVFVQMLGKLVAPSKGN-WKG-DKDQWILFTDIEGLVIEGDGEINGQGSSWWEHKGS---------RPTALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSGTSNIHIS 225 HSP 2 Score: 28.4906 bits (62), Expect = 5.210e-40 Identity = 13/25 (52.00%), Postives = 13/25 (52.00%), Query Frame = 2 Query: 803 GIFTYRIRNFACGAXHGYSIGSLGK 877 G I CG HG SIGSLGK Sbjct: 218 GTSNIHISGIDCGPGHGISIGSLGK 242
BLAST of EY660204 vs. ExPASy Swiss-Prot
Match: PGLR2_JUNAS (Polygalacturonase OS=Juniperus ashei GN=JNA2 PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 6.781e-40 Identity = 80/206 (38.83%), Postives = 116/206 (56.31%), Query Frame = 1 Query: 190 VIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCK-INTTNPC--RHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASRGGEVKNSIVGTGDDCISI 798 V V +GA GDG +D T+AF W AC+ + +V A F+++ + GPC+ + K+ GTI A DP WK N + W++F R+ + G G I+G G WWS CK IN C + PTAI K++ V+ L + NS + H+ F C V I +K+ AP +SPNTDGI I AS+ E++ +GTGDDC+++ Sbjct: 59 VFNVEHYGAVGDGKHDSTDAFEKTWNAACNKLSAVFLV-PANKKFVVNNLVFYGPCQPHFSFKVDGTIAAYPDPAKWK--NSKIWMHFARLTDFNLMGTGVIDGQGNRWWSDQCKTINGRTVCNDKGRPTAIKIDFSKSVTVKELTLTNSPEFHLVFGECDGVKIQGIKIKAPRDSPNTDGIDIFASKRFEIEKCTIGTGDDCVAV 261 HSP 2 Score: 30.0314 bits (66), Expect = 6.781e-40 Identity = 12/19 (63.16%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 821 IRNFACGAXHGYSIGSLGK 877 I++ CG HG SIGSLGK Sbjct: 270 IKDLTCGPGHGMSIGSLGK 288
BLAST of EY660204 vs. ExPASy Swiss-Prot
Match: PGLR_PRUPE (Polygalacturonase OS=Prunus persica PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 9.277e-36 Identity = 79/201 (39.30%), Postives = 108/201 (53.73%), Query Frame = 1 Query: 199 VGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSR-LTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASRGGEVKNSIVGTGDDCISI 798 V GAK DG D T+AF +AW KAC+ I AG TF + + SGPCK+ +T +I+GT+VAP D V N W++F+ VN +T+ GG ++G G W+ CK C T + F N+ V L +NSQ HI + V + ++V SPNTDGIH+ S G + NS + TGDDC+SI Sbjct: 30 VASLGAKADGKTDSTKAFLSAWAKACASMNPGVIYVPAG-TFFLRDVVFSGPCKNNAITFRIAGTLVAPSDYRVIG--NAANWIFFHHVNGVTISGG-ILDGQGTALWA--CKACHGESCPSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDFQNVQMQGVRVSRSGNSPNTDGIHVQMSSGVTILNSKIATGDDCVSI 224 HSP 2 Score: 30.0314 bits (66), Expect = 9.277e-36 Identity = 13/19 (68.42%), Postives = 13/19 (68.42%), Query Frame = 2 Query: 821 IRNFACGAXHGYSIGSLGK 877 I ACG HG SIGSLGK Sbjct: 233 IEGVACGPGHGISIGSLGK 251
BLAST of EY660204 vs. ExPASy Swiss-Prot
Match: PGLR1_ARATH (Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana GN=PGA3 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.207e-35 Identity = 74/208 (35.58%), Postives = 113/208 (54.33%), Query Frame = 1 Query: 175 SKSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASRGGEVKNSIVGTGDDCISI 798 S + V + FGA GDG + +AF N W + C P ++ G TFL P+ +GPCKS++T+ + GTI+A G W F RV++L + G GT +G G+ W ++ C PT++ F KN+++ + VN++ H+ V I N+K+ APAESPNTDGIH+S + + +S + TGDDC+S+ Sbjct: 46 SGNPTVYDITKFGAVGDGSTNTFKAFLNTWIQVCDSPVPATLLVPKG-TFLAGPVIFAGPCKSKVTVNVIGTIIATTS-----GYATPEWFLFERVDNLVLTGTGTFHGKGEAVW-KADGCGKKVQCNLPPTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSV 246 HSP 2 Score: 27.335 bits (59), Expect = 1.207e-35 Identity = 10/19 (52.63%), Postives = 12/19 (63.16%), Query Frame = 2 Query: 821 IRNFACGAXHGYSIGSLGK 877 + CG HG S+GSLGK Sbjct: 255 VERVICGPGHGLSVGSLGK 273
BLAST of EY660204 vs. ExPASy Swiss-Prot
Match: PGLR_GOSHI (Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.290e-34 Identity = 80/242 (33.06%), Postives = 123/242 (50.83%), Query Frame = 1 Query: 73 VLIHVLVCLSASLVSTEGFDSLLELPHSGSNRTRSKSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASRGGEVKNSIVGTGDDCISI 798 + + +L+ +SAS V ++ FD V FGAK DG D ++ F +AWK+AC+ + +V G T+L+ +++ GPCK+ + + + GTI AP DP +K N W+ F V + + GGG +G G + ++ N + P I F N +Q++ +S+ HI C + + LK+ AP ESPNTDGIH+ S G + S + TGDDCISI Sbjct: 11 MFVLLLLFISASKVQSDAFD---------------------VVAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKG-TYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPN---WVRFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSK-LPVNIRFDFLTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISI 226 HSP 2 Score: 29.6462 bits (65), Expect = 8.290e-34 Identity = 12/19 (63.16%), Postives = 13/19 (68.42%), Query Frame = 2 Query: 821 IRNFACGAXHGYSIGSLGK 877 I+ CG HG SIGSLGK Sbjct: 235 IKEITCGPGHGISIGSLGK 253
BLAST of EY660204 vs. ExPASy Swiss-Prot
Match: PGLR3_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.406e-33 Identity = 66/196 (33.67%), Postives = 112/196 (57.14%), Query Frame = 1 Query: 211 GAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASRGGEVKNSIVGTGDDCISI 798 GA G+G D T+A AW AC + I+ G FL+ P++ +GPCK +T++++G ++A D +K + W+ RV++L + G G ++G G WS++ + + C+ P ++ N +V + ++NS+ H+ C ++I ++ V AP +SPNTDGIH+ S G + N+++G GDDCISI Sbjct: 47 GASGNGKTDSTKAVQEAWASACGGTGKQTILIPKG-DFLVGPLNFTGPCKGDVTIQVNGNLLATTDLSQYK--DHGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYD-CKILPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISI 238 HSP 2 Score: 27.335 bits (59), Expect = 1.406e-33 Identity = 12/25 (48.00%), Postives = 13/25 (52.00%), Query Frame = 2 Query: 803 GIFTYRIRNFACGAXHGYSIGSLGK 877 G I CG HG SIGSLG+ Sbjct: 241 GTSKVNITGVTCGPGHGISIGSLGR 265
BLAST of EY660204 vs. ExPASy Swiss-Prot
Match: PGLR_GOSBA (Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.406e-33 Identity = 80/242 (33.06%), Postives = 122/242 (50.41%), Query Frame = 1 Query: 73 VLIHVLVCLSASLVSTEGFDSLLELPHSGSNRTRSKSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASRGGEVKNSIVGTGDDCISI 798 + + +L+ +SAS V + FD V FGAK DG D ++ F +AWK+AC+ + +V G T+L+ +++ GPCK+ + + + GTI AP DP +K N W+ F V + + GGG +G G + ++ N + P I F N +Q++ +S+ HI C + + LK+ AP ESPNTDGIH+ S G + S + TGDDCISI Sbjct: 11 MFVLLLLFISASKVQPDAFD---------------------VVAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKG-TYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPN---WVRFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSK-LPVNIRFDFVTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISI 226 HSP 2 Score: 29.6462 bits (65), Expect = 1.406e-33 Identity = 12/19 (63.16%), Postives = 13/19 (68.42%), Query Frame = 2 Query: 821 IRNFACGAXHGYSIGSLGK 877 I+ CG HG SIGSLGK Sbjct: 235 IKEITCGPGHGISIGSLGK 253
BLAST of EY660204 vs. ExPASy Swiss-Prot
Match: PGLR2_PLAAC (Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.869e-33 Identity = 76/208 (36.54%), Postives = 116/208 (55.77%), Query Frame = 1 Query: 181 SKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCK-SRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRS-CKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASRGGEVKNSIVGTGDDCISI 798 S V V D+GAKG G D ++A AWK AC+ + ++ G + + + + GPCK S++ +I G + AP DP +K W+ F R++ LTV G GT++G GQ W+++ C N C+HA + F K+ V+++ +NS+ HI C + ++ V AP S NTDGIH+ S+G + N+ + TGDDCISI Sbjct: 6 SGSVFNVNDYGAKGAG--DISQAVMKAWKAACASQGPSTVLIPKG-NYNMGEVAMQGPCKGSKIGFQIDGVVKAPADPSKFKSDG---WVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCDKNPN--CKHAAMNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGISKGVTITNTKIATGDDCISI 205 HSP 2 Score: 26.1794 bits (56), Expect = 6.869e-33 Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2 Query: 836 CGAXHGYSIGSLGK 877 CG HG SIGSLG+ Sbjct: 219 CGPGHGISIGSLGR 232
BLAST of EY660204 vs. ExPASy Swiss-Prot
Match: PGLR2_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG9 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 4.360e-32 Identity = 65/196 (33.16%), Postives = 107/196 (54.59%), Query Frame = 1 Query: 211 GAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASRGGEVKNSIVGTGDDCISI 798 GA G+G D T+A AW AC + I+ G FL+ ++ +GPCK +T+++ G ++A D +K W+ RV++L + G G ++G G WS++ C+ P ++ N +V + ++NS+ H+ C ++I ++ V AP +SPNTDGIH+ S G + N+++G GDDCISI Sbjct: 47 GASGNGKTDSTKAVQEAWASACGGTGKQTILIPKG-DFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYK--EHGNWIEILRVDNLVITGKGNLDGQGPAVWSKN-SCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYQCKNMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISI 238 HSP 2 Score: 27.335 bits (59), Expect = 4.360e-32 Identity = 12/25 (48.00%), Postives = 13/25 (52.00%), Query Frame = 2 Query: 803 GIFTYRIRNFACGAXHGYSIGSLGK 877 G I CG HG SIGSLG+ Sbjct: 241 GTSKVNITGVTCGPGHGISIGSLGR 265 The following BLAST results are available for this feature:
BLAST of EY660204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY660204 ID=EY660204; Name=EY660204; organism=Citrus sinensis; type=EST; length=891bpback to top |