EY660204
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660204 vs. ExPASy Swiss-Prot
Match: PGLR1_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG1 PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 5.678e-32 Identity = 65/196 (33.16%), Postives = 108/196 (55.10%), Query Frame = 1 Query: 211 GAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASRGGEVKNSIVGTGDDCISI 798 GA G+G D T+A AW AC + I+ G FL+ ++ +GPCK +T+++ G ++A D +K + W+ RV++L + G G ++G G WS++ C+ P ++ N +V + ++NS+ H+ C ++I ++ V AP +SPNTDGIH+ S G + N+++G GDDCISI Sbjct: 47 GASGNGKTDSTKAVQEAWASACGGTGKQTILIPKG-DFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYK--DHGNWIEILRVDNLVITGKGNLDGQGPAVWSKN-SCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISI 238 HSP 2 Score: 27.335 bits (59), Expect = 5.678e-32 Identity = 12/25 (48.00%), Postives = 13/25 (52.00%), Query Frame = 2 Query: 803 GIFTYRIRNFACGAXHGYSIGSLGK 877 G I CG HG SIGSLG+ Sbjct: 241 GTSKVNITGVTCGPGHGISIGSLGR 265
BLAST of EY660204 vs. ExPASy Swiss-Prot
Match: PGLR_TOBAC (Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.680e-32 Identity = 76/221 (34.39%), Postives = 115/221 (52.04%), Query Frame = 1 Query: 136 LLELPHSGSNRTRSKSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASRGGEVKNSIVGTGDDCISI 798 LL L H G ++T V + +GA + D +EA NA+K+AC + + IV G TF ++ + + GPCKS L L+I T+ AP DP L WL N+++ T+ GGG ++G W CK + C P ++F+ N ++++ ++S+ H+ C + V APA SPNTDGIH+S S + +S TGDDCIS+ Sbjct: 13 LLFLAHFGESQTG-----VFDITKYGANSNA--DISEALLNAFKEACQSTSPSTIVIPKG-TFTMNQVKLEGPCKSPLELQIQATLKAPSDPSQ---LKVGEWLTVNKLDQFTMSGGGILDGQAAAAWE--CK--QSKKCNKLPNNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRSSSVNITDSNFSTGDDCISV 218 HSP 2 Score: 25.7942 bits (55), Expect = 5.680e-32 Identity = 10/18 (55.56%), Postives = 11/18 (61.11%), Query Frame = 2 Query: 821 IRNFACGAXHGYSIGSLG 874 I CG HG S+GSLG Sbjct: 227 ITRVTCGPGHGISVGSLG 244
BLAST of EY660204 vs. ExPASy Swiss-Prot
Match: PGLR6_ARATH (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana GN=At2g43860 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.633e-31 Identity = 71/198 (35.86%), Postives = 107/198 (54.04%), Query Frame = 1 Query: 208 FGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSR-LTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASRGGEVKNSIVGTGDDCISI 798 +GAK DG D T+AF AW AC+ T I+ G + + + CK ++++I+G+IVAP+D + + + W++F V +++ GG ++ G W CK N + C ++ F N+K+ L +NSQ+ HI N V I +KV A SPNTDGIH+ +S + NS +GTGDDCISI Sbjct: 38 YGAKPDGSKDSTKAFLAAWDVACASANPTTIIVPKGRFLVGNLVFHGNECKQAPISIRIAGSIVAPEDFRIIA--SSKHWIWFEDVTDVSIYGG-ILDAQGTSLWK--CKNNGGHNCPTGAKSLVFSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDGVKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISI 230 HSP 2 Score: 28.1054 bits (61), Expect = 1.633e-31 Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 2 Query: 821 IRNFACGAXHGYSIGSLGKS 880 I+ CG HG SIGSLG++ Sbjct: 239 IQTIRCGPGHGISIGSLGRA 258
BLAST of EY660204 vs. ExPASy Swiss-Prot
Match: PGLR_MEDSA (Polygalacturonase OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 2.288e-30 Identity = 68/206 (33.01%), Postives = 109/206 (52.91%), Query Frame = 1 Query: 190 VIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINT---TNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASRGGEVKNSIVGTGDDCISI 798 V+ + FG K + +D +A +AW +AC+ KIV AG T+ ++ I++ GPCK+ + L++ GTI AP DP V KG + W F ++HLT+ G G +G G + ++ + N F+ N V+ + +S+ H+ C + + AP +SPNTDGIH+ S ++ N+ +GTGDDC+SI Sbjct: 24 VLDISKFGGKPN--SDIGQALTSAWNEACASTTAAKIVIPAG-TYQLNGIELKGPCKAPIELQVDGTIQAPADPSVIKGTEQ--WFKFLYMDHLTLSGKGVFDGQGATVYKKAAPASAWSGKNSNSKVFMNFGFNFVNNSIVRGVTSKDSKNFHVMVFGCKNITFDGFTITAPGDSPNTDGIHMGKSTDVKILNTNIGTGDDCVSI 224 HSP 2 Score: 27.335 bits (59), Expect = 2.288e-30 Identity = 10/19 (52.63%), Postives = 13/19 (68.42%), Query Frame = 2 Query: 821 IRNFACGAXHGYSIGSLGK 877 ++ CG HG S+GSLGK Sbjct: 233 VQGVNCGPGHGLSVGSLGK 251
BLAST of EY660204 vs. ExPASy Swiss-Prot
Match: PGLR2_ARATH (Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana GN=At3g07850 PE=1 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 5.048e-30 Identity = 73/216 (33.80%), Postives = 109/216 (50.46%), Query Frame = 1 Query: 157 GSNRTRSKSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTI-NGMGQ-EWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASRGGEVKNSIVGTGDDCISI 798 G+ + +K + V GAKGD DD+ AFA AWK+AC+ A + I G +++ ++ GPCK +TL+++G AP K W+ F + T+ G I +G G W + C T C P I F N K+ ++ NS+ H+ NC + +S++ + AP ES NTDGIHI S G + + + TGDDC+SI Sbjct: 58 GAKVSGAKPGAAVDVKASGAKGDSKTDDSAAFAAAWKEACA--AGSTITVPKG-EYMVESLEFKGPCKGPVTLELNGNFKAPATVKTTKP--HAGWIDFENIADFTLNGNKAIFDGQGSLAWKANDCA--KTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSI 266 HSP 2 Score: 28.8758 bits (63), Expect = 5.048e-30 Identity = 11/19 (57.89%), Postives = 13/19 (68.42%), Query Frame = 2 Query: 821 IRNFACGAXHGYSIGSLGK 877 + N CG HG SIGSLG+ Sbjct: 275 VENVECGPGHGISIGSLGR 293
BLAST of EY660204 vs. ExPASy Swiss-Prot
Match: PGLR_OENOR (Exopolygalacturonase (Fragment) OS=Oenothera organensis PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.117e-29 Identity = 62/188 (32.98%), Postives = 100/188 (53.19%), Query Frame = 1 Query: 235 DDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASRGGEVKNSIVGTGDDCISI 798 D T+A AWK+AC+ + + I+ G F + I + GPCKS + L++ GT+ AP DP KGL W+ N+++ LT+ GGG +G G+ W ++ C+ + + N ++++ ++S+ H+ C + K+ A S NTDGIHI S G + N+ + TGDDCIS+ Sbjct: 1 DSTQALTTAWKEACASASPSTILVPKG-NFAVGLITLEGPCKSSIGLQLQGTLKAPADPSKIKGLG---WINLNKIDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSILRDVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGDDCISL 184 HSP 2 Score: 29.261 bits (64), Expect = 1.117e-29 Identity = 11/19 (57.89%), Postives = 13/19 (68.42%), Query Frame = 2 Query: 821 IRNFACGAXHGYSIGSLGK 877 I N CG HG S+GSLG+ Sbjct: 193 ITNITCGPGHGISVGSLGR 211
BLAST of EY660204 vs. ExPASy Swiss-Prot
Match: PGLR_BRANA (Polygalacturonase OS=Brassica napus PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 4.487e-28 Identity = 61/197 (30.96%), Postives = 103/197 (52.28%), Query Frame = 1 Query: 208 FGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASRGGEVKNSIVGTGDDCISI 798 F A G +D T A A+ AC PA ++++ G F + ++GPCKS + + G + D + RW+ F ++N + GGGT +G G W + + T C+ P ++ F N +++++ ++++ H + + N+K+IAPAESPNTDGIH+ G ++ N+ + TGDDCIS+ Sbjct: 25 FTAGGPPNSDITAAVLKAFTSACQAPAPSQVLIPKG-DFKLGETVMTGPCKSPIEFTLQGNVKT----DGGSTQGKDRWVVFEKINGFKLNGGGTFDGEGNAAWKAN-NCHKTFECKKLPISVRFDFVDNAEIKDVTSLDAKNFHFNVISGKNMTFDNIKIIAPAESPNTDGIHLGRCEGVKILNTKIATGDDCISV 215 HSP 2 Score: 27.335 bits (59), Expect = 4.487e-28 Identity = 11/25 (44.00%), Postives = 14/25 (56.00%), Query Frame = 2 Query: 803 GIFTYRIRNFACGAXHGYSIGSLGK 877 G+ I CG HG S+GSLG+ Sbjct: 218 GMKNLLIEKVVCGPGHGISVGSLGR 242
BLAST of EY660204 vs. ExPASy Swiss-Prot
Match: PGLRX_COCCA (Exopolygalacturonase OS=Cochliobolus carbonum GN=PGX1 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 4.020e-13 Identity = 67/249 (26.91%), Postives = 103/249 (41.37%), Query Frame = 1 Query: 97 LSASLVSTEGFDSLLELPHSGSNRTRSKSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHP-IDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNH-------LTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLKVIAPAESPN----TDGIHISASRGGEVKNSIVGTGDDCISIXGN 807 L A V + F + LP S+ S++K + G K D N + K C+ +VF G F I +D++ + + L I GTI D D W+ N + ++ N + V GGGT++G GQ W+ K + P KN K+ +L+ S Q + N +VV SN+ + ++S N TDG S ++NS + GDDC+S N Sbjct: 25 LGAKAVVAKRFPPVPFLPGKASSVPGSRNKTCMLKALGGGKDDSANILSAV------KQCNNGGH--VVFPKGQQFTIGTALDLT--FLNGIDLDIQGTIQFTNDTDYWQA-NSFKQVFQNATTFFQLGGKDINVYGGGTLDGNGQAWYDLYAK----DIYILRPILFGLIGAKNAKISDLKFRYSPQWYTLVANSSQVVFSNIDIFGDSKSKNPAKNTDGWDTYRSDNIIIQNSNINNGDDCVSFKPN 258 HSP 2 Score: 27.335 bits (59), Expect = 4.020e-13 Identity = 9/19 (47.37%), Postives = 13/19 (68.42%), Query Frame = 2 Query: 821 IRNFACGAXHGYSIGSLGK 877 ++N C HG S+GSLG+ Sbjct: 264 VQNLVCNGSHGISVGSLGQ 282 The following BLAST results are available for this feature:
BLAST of EY660204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY660204 ID=EY660204; Name=EY660204; organism=Citrus sinensis; type=EST; length=891bpback to top |