EY660171

Overview
NameEY660171
Unique NameEY660171
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7606 contig Csv1_Contig7606:101..1002. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: HAOX2_HUMAN (Hydroxyacid oxidase 2 OS=Homo sapiens GN=HAO2 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.649e-29
Identity = 72/178 (40.45%), Postives = 105/178 (58.99%), Query Frame = 2
Query:  167 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQ 697
            +++A A+E+L K   D+   GA+D  T  +N  AF RI  RPR L DVS++D  TT+ G +IS PI IAPT    +  P+GE          G     S++++ S+E++    P G+R+FQLYV+ D  +  QL++R E  GFKA+ +T+DTP  G R  DI+N+  L   LTL + Q
Sbjct:    8 DFQAHAREQLSKSTRDFIEGGADDSITRDDNIAAFKRIRLRPRYLRDVSEVDTRTTIQGEEISAPICIAPTGFHCLVWPDGEMSTARAAQAAGICYITSTFASCSLEDIVIAAPEGLRWFQLYVHPDLQLNKQLIQRVESLGFKALVITLDTPVCGNRRHDIRNQ--LRRNLTLTDLQ 183          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD2_MYCTU (Putative L-lactate dehydrogenase [cytochrome] 2 OS=Mycobacterium tuberculosis GN=lldD2 PE=3 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 2.551e-27
Identity = 70/199 (35.18%), Postives = 106/199 (53.27%), Query Frame = 2
Query:  104 P*INLSRKQ---STDKMGEITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLK 688
            P +  +R Q   S  ++G    + +   IAK + P+  FDY   GAED+ ++   R  F  I F P IL DV+ +     VLG    +P  IAPT   ++ H EGE          G   +LS+ +T ++E++    P G ++FQLY+++DR+    LVRR   AGF  + +TVD P  G R  D++N  ++PP LTL+
Sbjct:   15 PLLQFNRPQFDTSKRRLGAALTIQDLRRIAKRRTPRAAFDYADGGAEDELSIARARQGFRDIEFHPTILRDVTTVCAGWNVLGQPTVLPFGIAPTGFTRLMHTEGEIAGARAAAAAGIPFSLSTLATCAIEDLVIAVPQGRKWFQLYMWRDRDRSMALVRRVAAAGFDTMLVTVDVPVAGARLRDVRNGMSIPPALTLR 213          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: HAOX2_MOUSE (Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.684e-26
Identity = 66/178 (37.08%), Postives = 104/178 (58.43%), Query Frame = 2
Query:  167 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQ 697
            +++A A+++L K  +D+    A+D  T  +N  AF RI  RPR L DVSKID  TT+ G +I+ PI I+PTA   +A  +GE               +SS+++ +VE++ +  P G+ +FQLYV  D ++  Q+V+R E  GFKA+ +TVD P LG R  + ++   L   + LK+ +
Sbjct:    8 DFKAQAQKQLSKTSWDFIEGEADDGITYNDNLAAFRRIRLRPRYLRDVSKIDTRTTIQGQEINAPICISPTAFHSIAWADGEKSTAKAAQKANICYVISSYASYTVEDIVAAAPGGLHWFQLYVQPDWDINKQMVQRIEALGFKALVVTVDAPVLGNRRGNKRSLLDLEANIKLKDLR 185          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: MDLB_PSEPU ((S)-mandelate dehydrogenase OS=Pseudomonas putida GN=mdlB PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.283e-26
Identity = 62/171 (36.26%), Postives = 97/171 (56.73%), Query Frame = 2
Query:  158 NVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLP 670
            NV +Y  + +++LPKMV+DY   GAED++ ++ NR+ F +  F+P+ L+DVS+  +   VLG + SMP++I PT +     P+G+          G    LS+ S  S+E++A    G  +FQLYV   R +   +V +A   G+  + LT D    G RE D+ NRF +P
Sbjct:    7 NVEDYRKLRQKRLPKMVYDYLEGGAEDEYGVKHNRDVFQQWRFKPKRLVDVSRRSLQAEVLGKRQSMPLLIGPTGLNGALWPKGDLALARAATKAGIPFVLSTASNMSIEDLARQCDGDLWFQLYVI-HREIAQGMVLKALHTGYTTLVLTTDVAVNGYRERDLHNRFKIP 176          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_PSEFS (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas fluorescens (strain SBW25) GN=lldD PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.919e-23
Identity = 66/203 (32.51%), Postives = 100/203 (49.26%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMXRGNDSG 739
            I++  +Y A A+ KLP+ +FDY   GA  + T++ N +  + I  R RIL +V  + + TTV G ++ MP++++P  +  M    GE          G    LS+ S   +EEVAS      +FQLYV KDR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G M R +D G
Sbjct:    3 ISSASDYRAAAQRKLPRFLFDYIDGGAYAEHTMRANSSDLAEISLRQRILRNVDNLSLKTTVFGQELDMPVILSPVGLTGMYARRGEVQAAKAAANKGVPFCLSTVSVCPIEEVASQSARAIWFQLYVLKDRGFMRNALERAQAAGVTTLVFTVDMPTPGARYRDAHSGMSGPFAAQRRMLQAMTKPQWAFDVGLMGRPHDLG 205          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_VIBPA (L-lactate dehydrogenase [cytochrome] OS=Vibrio parahaemolyticus GN=lldD PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.892e-22
Identity = 65/206 (31.55%), Postives = 101/206 (49.03%), Query Frame = 2
Query:  167 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQ-------GLDLGKMXRGNDSGLAAYXAGQ 763
            +Y A AK KLP  +F Y   G+ D+ TL+ N +    +  R R+L D++ + + T + G K++MPI +AP  +  M    GE          G   T+S+ S   +EEVA       +FQLYV KDR  +  ++ RA+ AG   +  TVD P  G R  D+ +  + P     + FQ        LD+G + + +D G  +   G+
Sbjct:    8 DYRAAAKAKLPPFLFHYIDGGSYDERTLKRNTDDLGDVALRQRVLRDMTDLSLETEIFGEKLAMPIALAPVGLTGMYARRGEVQAAKAAEKKGIPFTMSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMKNVLERAKAAGVTTLVFTVDMPVPGARYRDMHSGMSGPNAAMRRVFQAMRHPSWALDVGLLGKPHDLGNISTYRGE 213          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_PSEU2 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas syringae pv. syringae (strain B728a) GN=lldD PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.389e-22
Identity = 67/215 (31.16%), Postives = 103/215 (47.91%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQ-------GLDLGKMXRGNDSGLAAYXAGQLIVL 775
            I++  +Y A AK KLP+ +FDY   GA  + TL+ N +  + I  R R+L +V  + + T + G  ++MPI+++P  +  M    GE               LS+ S  S+EEVAS      +FQLYV KDR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q        L++G + R +D G  +   G+   L
Sbjct:    3 ISSASDYRAAAKRKLPRFLFDYIDGGAYAEHTLRANGSDLADISLRQRVLKNVDNVSLETRLFGESLAMPIILSPVGLSGMYARRGEVQVARAAANKRIPFCLSTVSVCSIEEVASQSDQAIWFQLYVLKDRGFMKNALERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGPYAAPRRILQAMTKPDWALNVGLLGRPHDLGNISRYLGKATTL 217          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_PSEMY (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas mendocina (strain ymp) GN=lldD PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.568e-21
Identity = 71/213 (33.33%), Postives = 101/213 (47.42%), Query Frame = 2
Query:  167 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKM--XRGNDSGLAAY 751
            +Y A A+ KLP  +F Y   GA  + TL+ N    S I  R R+L ++S++D++T + G K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KDR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +                DLG +   RGN +GLA Y
Sbjct:    8 DYRAAAERKLPPFLFHYADGGAYAEHTLRRNVADLSNIELRQRVLKNMSELDLSTELFGEKMSMPVGLAPVGLTGMYARRGEVQAAKAAAAKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGCSTLVFTVDMPVPGARYRDAHSGMSGPNGPLRRVLQAMTHPQWAWDVGVMGKPHDLGNISAYRGNPTGLADY 220          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_VIBCM (L-lactate dehydrogenase [cytochrome] OS=Vibrio cholerae serotype O1 (strain M66-2) GN=lldD PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.660e-21
Identity = 63/198 (31.82%), Postives = 100/198 (50.51%), Query Frame = 2
Query:  167 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMXRGNDSG 739
            +Y A AK KLP  +F Y   G+  + TL+ N +  + I  R R+L D+S++ + T + G K+++PI ++P  +  M    GE          G   TLS+ S   +EEVA +     +FQLYV KDR  +  ++ RA+ AG K +  TVD P  G R  D+ +  + P     +  Q +       D+G + + +D G
Sbjct:    8 DYRAAAKAKLPPFLFHYIDGGSYGEHTLRRNTDDLADIALRQRVLSDMSELSLETELFGEKMALPIALSPVGLTGMYARRGEVQAAQAAEAKGIPFTLSTVSVCPIEEVAPSIHRPIWFQLYVLKDRGFMKNVLERAKAAGVKNLVFTVDMPVPGARYRDMHSGMSGPNAAMRRVLQAMAHPSWAWDVGLLGKPHDLG 205          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_VIBCH (L-lactate dehydrogenase [cytochrome] OS=Vibrio cholerae GN=lldD PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.660e-21
Identity = 63/198 (31.82%), Postives = 100/198 (50.51%), Query Frame = 2
Query:  167 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMXRGNDSG 739
            +Y A AK KLP  +F Y   G+  + TL+ N +  + I  R R+L D+S++ + T + G K+++PI ++P  +  M    GE          G   TLS+ S   +EEVA +     +FQLYV KDR  +  ++ RA+ AG K +  TVD P  G R  D+ +  + P     +  Q +       D+G + + +D G
Sbjct:    8 DYRAAAKAKLPPFLFHYIDGGSYGEHTLRRNTDDLADIALRQRVLSDMSELSLETELFGEKMALPIALSPVGLTGMYARRGEVQAAQAAEAKGIPFTLSTVSVCPIEEVAPSIHRPIWFQLYVLKDRGFMKNVLERAKAAGVKNLVFTVDMPVPGARYRDMHSGMSGPNAAMRRVLQAMAHPSWAWDVGLLGKPHDLG 205          
The following BLAST results are available for this feature:
BLAST of EY660171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
HAOX2_HUMAN4.649e-2940.45Hydroxyacid oxidase 2 OS=Homo sapiens GN=HAO2 PE=2... [more]
LLDD2_MYCTU2.551e-2735.18Putative L-lactate dehydrogenase [cytochrome] 2 OS... [more]
HAOX2_MOUSE3.684e-2637.08Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2... [more]
MDLB_PSEPU6.283e-2636.26(S)-mandelate dehydrogenase OS=Pseudomonas putida ... [more]
LLDD_PSEFS2.919e-2332.51L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_VIBPA1.892e-2231.55L-lactate dehydrogenase [cytochrome] OS=Vibrio par... [more]
LLDD_PSEU29.389e-2231.16L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_PSEMY3.568e-2133.33L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_VIBCM4.660e-2131.82L-lactate dehydrogenase [cytochrome] OS=Vibrio cho... [more]
LLDD_VIBCH4.660e-2131.82L-lactate dehydrogenase [cytochrome] OS=Vibrio cho... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-C10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660171 ID=EY660171; Name=EY660171; organism=Citrus sinensis; type=EST; length=898bp
CCACGCGTCCGCTTAAATCTCCCTCTATAACTCAGTCTTTGTTCATCATC
GTCTTCTCTCTACTGGTTTCTCTGAATGCACTTTGCTGCACTGTCTTTGT
AAACCTTAGATTAATTTAAGTAGAAAACAGTCAACTGACAAGATGGGAGA
GATCACAAATGTGATGGAGTATGAGGCCATTGCCAAGGAAAAGTTGCCAA
AGATGGTGTTTGATTACTATGCTTCAGGTGCAGAGGACCAGTGGACTTTG
CAAGAGAACAGGAATGCTTTCTCAAGAATCCTGTTTCGACCTCGCATTCT
GATTGATGTAAGCAAAATAGACATGAATACCACTGTCTTGGGCTTCAAGA
TATCGATGCCAATCATGATTGCCCCAACAGCCATGCAGAAGATGGCTCAT
CCTGAAGGGGAGTATGCTACAGCTAGAGCTGCATCGGCTGCTGGAACGAT
TATGACATTGTCTTCGTGGTCTACTTCTAGCGTTGAAGAGGTTGCTTCAA
CAGGACCTGGCATCCGCTTTTTCCAGCTCTATGTGTACAAGGACAGGAAT
GTGGTTGCTCAGCTTGTGAGAAGGGCTGAAAGAGCCGGATTCAAGGCCAT
TGCTCTAACAGTTGATACCCCGAGGCTGGGTCGCAGAGAAGCTGACATCA
AGAACAGATTCACTCTACCACCATTTTTGACATTAAAGAATTTTCAGGGT
TTGGACCTTGGCAAGATGGNACGAGGCAATGACTCTGGGCTTGCTGCCTA
TGNTGCTGGTCAATTGATCGTTCTCTGACCTGGAAGACGTGAAGTGGCTT
CAACAATCACCAATTNGCCAATCTGGTGAGGGTGTACTCCAGCAAAGATG
CGCGGATTGCATTCAGCTGAACAGCTGGGATTATGTATCCATCATGGA
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