EY660171

Overview
NameEY660171
Unique NameEY660171
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_CHRSD (L-lactate dehydrogenase [cytochrome] OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=lldD PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.716e-19
Identity = 55/160 (34.38%), Postives = 80/160 (50.00%), Query Frame = 2
Query:  167 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREAD 646
            +Y   AK +LP  +F Y   GA  + TL+ N    + I  R R+L D+S + + T + G  ++MP+ +AP  +  M    GE          G   TLS+ S   + EVAS      +FQLYV +DR  +  ++ RA+ AG K +  TVD P  G R  D
Sbjct:    8 DYRHAAKRRLPPFLFHYADGGAYAEHTLRRNVEDLAGIALRQRVLKDMSHLSLETELFGEPLAMPVALAPVGLAGMYARRGEVQAARAAASKGIPFTLSTVSVCPIAEVASAIERPLWFQLYVLRDRGFMKHVLERAKAAGVKTLVFTVDMPVPGARYRD 167          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_STRM5 (L-lactate dehydrogenase [cytochrome] OS=Stenotrophomonas maltophilia (strain R551-3) GN=lldD PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.269e-18
Identity = 65/213 (30.52%), Postives = 97/213 (45.54%), Query Frame = 2
Query:  167 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKM--XRGNDSGLAAY 751
            +Y A A+ +LP  +F Y   GA  + TL+ N +  S I  R R+L ++S + + T + G  ++MP+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +                DLG +   RGN +GL  Y
Sbjct:    8 DYRAAAQRRLPPFLFHYIDGGAYAEHTLKRNVSDLSDIALRQRVLRNMSDLSLETELFGETLAMPVALAPVGLTGMYARRGEVQAARAADSRGIPFTLSTVSVCPIEEVAPAIQRPMWFQLYVLRDRGFMRNALERAQAAGVTTLVFTVDMPVPGARYRDAHSGMSGPNASLRRIGQAITHPHWAWDVGLFGRPHDLGNISTYRGNPTGLEDY 220          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_XANOR (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas oryzae pv. oryzae GN=lldD PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.657e-18
Identity = 61/208 (29.33%), Postives = 100/208 (48.08%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMXRGNDSG-LAAY 751
            I+   +Y A A+ +LP  +F Y   GA  + TL+ N +  + +  R R+L ++S + ++T + G  ++MP+ + P  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KDR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G + + +D G ++AY
Sbjct:    3 ISAASDYRAAAQARLPPFLFHYIDGGAYAEHTLRRNVSDLADVALRQRVLRNMSDLRLSTELFGETLAMPVALGPVGLTGMYARRGEVQAARAAAARGIPFTLSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMRNALERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGPNASLRRMLQAVTHPRWAWDVGVLGKPHDLGNISAY 210          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_XANOP (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=lldD PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.657e-18
Identity = 61/208 (29.33%), Postives = 100/208 (48.08%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMXRGNDSG-LAAY 751
            I+   +Y A A+ +LP  +F Y   GA  + TL+ N +  + +  R R+L ++S + ++T + G  ++MP+ + P  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KDR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G + + +D G ++AY
Sbjct:    3 ISAASDYRAAAQARLPPFLFHYIDGGAYAEHTLRRNVSDLADVALRQRVLRNMSDLRLSTELFGETLAMPVALGPVGLTGMYARRGEVQAARAAAARGIPFTLSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMRNALERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGPNASLRRMLQAVTHPRWAWDVGVLGKPHDLGNISAY 210          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_XANOM (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=lldD PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.657e-18
Identity = 61/208 (29.33%), Postives = 100/208 (48.08%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMXRGNDSG-LAAY 751
            I+   +Y A A+ +LP  +F Y   GA  + TL+ N +  + +  R R+L ++S + ++T + G  ++MP+ + P  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KDR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G + + +D G ++AY
Sbjct:    3 ISAASDYRAAAQARLPPFLFHYIDGGAYAEHTLRRNVSDLADVALRQRVLRNMSDLRLSTELFGETLAMPVALGPVGLTGMYARRGEVQAARAAAARGIPFTLSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMRNALERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGPNASLRRMLQAVTHPRWAWDVGVLGKPHDLGNISAY 210          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD1_MYCTU (Putative L-lactate dehydrogenase [cytochrome] 1 OS=Mycobacterium tuberculosis GN=lldD1 PE=3 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.657e-18
Identity = 52/145 (35.86%), Postives = 85/145 (58.62%), Query Frame = 2
Query:  182 AKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVD 616
            AK +LPK V+    + +E   T+ +N  AFS + F P ++    K D++TTV+G ++S+P++I+PT +Q +  P GE          GT+M LSS+++  +EEV +  P   FFQ+Y    R+ +A+ V RA +AG   + +T D
Sbjct:   16 AKRRLPKSVYSSLIAASEKGITVADNVAAFSELGFAPHVIGATDKRDLSTTVMGQEVSLPVIISPTGVQAV-DPGGEVAVARAAAARGTVMGLSSFASKPIEEVIAANPK-TFFQVYWQGGRDALAERVERARQAGAVGLVVTTD 158          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_ENTS8 (L-lactate dehydrogenase [cytochrome] OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=lldD PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.165e-18
Identity = 54/165 (32.73%), Postives = 81/165 (49.09%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREAD 646
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    +SMP+ + P  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYIDGGAYAEYTLKRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALGPVGLCGMYARRGEVQAARAASAKGIPFTLSTVSVCPIEEVAPVMNRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRD 167          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_ENT38 (L-lactate dehydrogenase [cytochrome] OS=Enterobacter sp. (strain 638) GN=lldD PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.165e-18
Identity = 55/165 (33.33%), Postives = 80/165 (48.48%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREAD 646
            I+   +Y A A+  LP  +F Y   GA  + TL+ N    S +  R R+L ++S + + T +    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYIDGGAYSEHTLRRNVEDLSEVALRQRVLKNMSDLSLETKLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADARGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRD 167          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_ACTPJ (L-lactate dehydrogenase [cytochrome] OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=lldD PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.074e-17
Identity = 52/165 (31.52%), Postives = 82/165 (49.70%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREAD 646
            I++  +Y   A+ ++P  +F Y   G+  + TL+ N    + +  R R+L D+S++D    + G K++MP ++AP     M    GE          G   TLS+ S   +EEV +      +FQLYV KDR  +  ++ RA+ AG   +  TVD P  G R  D
Sbjct:    3 ISSTNDYREAARRRVPPFMFHYADGGSFSERTLERNVTDLADLALRQRVLKDMSQLDTEIELFGEKLAMPAVLAPVGACGMYARRGEVQAAQAAENKGIPFTLSTVSICPIEEVTAAIKRPMWFQLYVLKDRGFMKHVLERAKAAGCSTLVFTVDMPTPGARYRD 167          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_ACTP7 (L-lactate dehydrogenase [cytochrome] OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=lldD PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.074e-17
Identity = 52/165 (31.52%), Postives = 82/165 (49.70%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREAD 646
            I++  +Y   A+ ++P  +F Y   G+  + TL+ N    + +  R R+L D+S++D    + G K++MP ++AP     M    GE          G   TLS+ S   +EEV +      +FQLYV KDR  +  ++ RA+ AG   +  TVD P  G R  D
Sbjct:    3 ISSANDYREAARRRVPPFMFHYADGGSFSERTLERNVTDLADLALRQRVLKDMSQLDTEIELFGEKLAMPAVLAPVGACGMYARRGEVQAAQAAENKGIPFTLSTVSICPIEEVTAAIKRPMWFQLYVLKDRGFMKHVLERAKAAGCSTLVFTVDMPTPGARYRD 167          
The following BLAST results are available for this feature:
BLAST of EY660171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_CHRSD9.716e-1934.38L-lactate dehydrogenase [cytochrome] OS=Chromohalo... [more]
LLDD_STRM51.269e-1830.52L-lactate dehydrogenase [cytochrome] OS=Stenotroph... [more]
LLDD_XANOR1.657e-1829.33L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]
LLDD_XANOP1.657e-1829.33L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]
LLDD_XANOM1.657e-1829.33L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]
LLDD1_MYCTU1.657e-1835.86Putative L-lactate dehydrogenase [cytochrome] 1 OS... [more]
LLDD_ENTS82.165e-1832.73L-lactate dehydrogenase [cytochrome] OS=Enterobact... [more]
LLDD_ENT382.165e-1833.33L-lactate dehydrogenase [cytochrome] OS=Enterobact... [more]
LLDD_ACTPJ1.074e-1731.52L-lactate dehydrogenase [cytochrome] OS=Actinobaci... [more]
LLDD_ACTP71.074e-1731.52L-lactate dehydrogenase [cytochrome] OS=Actinobaci... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-C10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660171 ID=EY660171; Name=EY660171; organism=Citrus sinensis; type=EST; length=898bp
CCACGCGTCCGCTTAAATCTCCCTCTATAACTCAGTCTTTGTTCATCATC
GTCTTCTCTCTACTGGTTTCTCTGAATGCACTTTGCTGCACTGTCTTTGT
AAACCTTAGATTAATTTAAGTAGAAAACAGTCAACTGACAAGATGGGAGA
GATCACAAATGTGATGGAGTATGAGGCCATTGCCAAGGAAAAGTTGCCAA
AGATGGTGTTTGATTACTATGCTTCAGGTGCAGAGGACCAGTGGACTTTG
CAAGAGAACAGGAATGCTTTCTCAAGAATCCTGTTTCGACCTCGCATTCT
GATTGATGTAAGCAAAATAGACATGAATACCACTGTCTTGGGCTTCAAGA
TATCGATGCCAATCATGATTGCCCCAACAGCCATGCAGAAGATGGCTCAT
CCTGAAGGGGAGTATGCTACAGCTAGAGCTGCATCGGCTGCTGGAACGAT
TATGACATTGTCTTCGTGGTCTACTTCTAGCGTTGAAGAGGTTGCTTCAA
CAGGACCTGGCATCCGCTTTTTCCAGCTCTATGTGTACAAGGACAGGAAT
GTGGTTGCTCAGCTTGTGAGAAGGGCTGAAAGAGCCGGATTCAAGGCCAT
TGCTCTAACAGTTGATACCCCGAGGCTGGGTCGCAGAGAAGCTGACATCA
AGAACAGATTCACTCTACCACCATTTTTGACATTAAAGAATTTTCAGGGT
TTGGACCTTGGCAAGATGGNACGAGGCAATGACTCTGGGCTTGCTGCCTA
TGNTGCTGGTCAATTGATCGTTCTCTGACCTGGAAGACGTGAAGTGGCTT
CAACAATCACCAATTNGCCAATCTGGTGAGGGTGTACTCCAGCAAAGATG
CGCGGATTGCATTCAGCTGAACAGCTGGGATTATGTATCCATCATGGA
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