EY660171

Overview
NameEY660171
Unique NameEY660171
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_ESCF3 (L-lactate dehydrogenase [cytochrome] OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=lldD PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.948e-21
Identity = 66/208 (31.73%), Postives = 102/208 (49.04%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMXRGNDSG-LAAY 751
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+   K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     + +Q +       D+G   R +D G ++AY
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAGAADAHGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVTHPQWAWDVGLNGRPHDLGNISAY 210          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_ERWCT (L-lactate dehydrogenase [cytochrome] OS=Erwinia carotovora subsp. atroseptica GN=lldD PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.356e-20
Identity = 65/203 (32.02%), Postives = 99/203 (48.77%), Query Frame = 2
Query:  167 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMXRGNDSG-LAAY 751
            +Y A A+ +LP  +F Y   GA  + TL+ N    + I  R RIL ++S + + T + G K++MP+++AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KDR  +   + RA+ AG K +  TVD P  G R  D  +  + P     +  Q +       D+G   + +D G ++AY
Sbjct:    8 DYRAAAQRRLPPFLFHYIDGGAYGEHTLRRNTADLADIALRQRILKNMSDLSLETQLFGEKLAMPVVLAPVGLTGMYARRGEVQAARAAAQKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRSALERAQAAGVKTLVFTVDMPTPGARYRDAHSGMSGPNAAARRMLQAVTHPQWAWDVGLNGKPHDLGNVSAY 210          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_XANP2 (L-lactate dehydrogenase [cytochrome] OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=lldD PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.771e-20
Identity = 68/208 (32.69%), Postives = 101/208 (48.56%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPF-------LTLKNFQGLDLGKMXRGNDSG-LAAY 751
            I++  +Y   A+ +LP  +F Y   GA  + TL+ N    S +  R R+L  V ++D++TT+L  ++SMP+ +AP  +  M    GE          G   TLS+ S  S+EEV S      +FQLYV KDR  +   + RA  AG + +  TVD P  G R  D  +  + P           L  F   D+G M   +D G ++AY
Sbjct:    3 ISSSSDYREAARRRLPPFLFHYIDGGAYAEATLRRNVEDLSDLALRQRVLKSVGEVDLSTTLLKQQLSMPVGLAPVGLTGMYARRGEVQAAQAATQKGIPFTLSTVSVCSIEEVQSQVGKPIWFQLYVLKDRGFMKNALERAWAAGIRTLVFTVDMPVPGARYRDAHSGMSGPNAAFRRMVQAVLHPFWAYDVGLMGTPHDLGNVSAY 210          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_SERP5 (L-lactate dehydrogenase [cytochrome] OS=Serratia proteamaculans (strain 568) GN=lldD PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.771e-20
Identity = 65/203 (32.02%), Postives = 99/203 (48.77%), Query Frame = 2
Query:  167 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMXRGNDSG-LAAY 751
            +Y A A+ KLP  +F Y   GA  + TL+ N    + I  R RIL ++S + + T++ G K++MP+++ P  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KDR  +   + RA+ AG K +  TVD P  G R  D  +  + P     +  Q +       D+G   + +D G ++AY
Sbjct:    8 DYRAAAQAKLPPFLFHYIDGGAYAEHTLRRNTEDLAGIALRQRILRNMSDLSLETSLFGEKLAMPVILGPVGLTGMYARRGEVQAAKAAAQKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAVRRMLQAVTHPQWAWDVGLCGKPHDLGNVSAY 210          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_SALCH (L-lactate dehydrogenase [cytochrome] OS=Salmonella choleraesuis GN=lldD PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.771e-20
Identity = 65/208 (31.25%), Postives = 101/208 (48.56%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMXRGNDSG-LAAY 751
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    + MP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P    L+ +Q +       D+G   R +D G ++AY
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLPMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIQRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMLRYWQAVMHPKWAWDVGLNGRPHDLGNISAY 210          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_CITK8 (L-lactate dehydrogenase [cytochrome] OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=lldD PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.771e-20
Identity = 66/208 (31.73%), Postives = 100/208 (48.08%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMXRGNDSG-LAAY 751
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R R+L ++S + + TT+   K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     + +Q         D+G   R +D G ++AY
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYIDGGAYAEYTLRRNVEDLSEVALRQRVLKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAALRRYWQAATHPQWAWDVGLNGRPHDLGNISAY 210          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_AZOC5 (L-lactate dehydrogenase [cytochrome] OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=lldD PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.771e-20
Identity = 64/203 (31.53%), Postives = 98/203 (48.28%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQ-------GLDLGKMXRGNDSG 739
            I++  +Y A AK +LP  +F Y   GA  ++TL+ N    S I  R ++L +V+ + + T + G K++MP+ +AP  +  M    GE          G   TLS+ S   +EEV S      +FQLYV KDR  +   + RA+ AG   +  TVD P  G R  D  +  +     T +  Q        LD+G + + +D G
Sbjct:    3 ISSPNDYRAAAKSRLPPFLFHYVDGGAYAEYTLRRNVEDLSHIALRQQVLRNVADLSLETELFGQKLTMPVALAPVGLTGMLARRGEVQAAKAAQAKGVPFTLSTVSVCPIEEVQSQCAKPIWFQLYVLKDRGFMRNALERAQAAGINTLIFTVDMPVPGARYRDAHSGMSGRSGPTRRVLQAMVHPRWALDVGLLGKPHDLG 205          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_SHISS (L-lactate dehydrogenase [cytochrome] OS=Shigella sonnei (strain Ss046) GN=lldD PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.313e-20
Identity = 66/208 (31.73%), Postives = 99/208 (47.60%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMXRGNDSG-LAAY 751
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G   R +D G ++AY
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAY 210          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_SHIFL (L-lactate dehydrogenase [cytochrome] OS=Shigella flexneri GN=lldD PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.313e-20
Identity = 66/208 (31.73%), Postives = 99/208 (47.60%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMXRGNDSG-LAAY 751
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G   R +D G ++AY
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAY 210          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_SHIF8 (L-lactate dehydrogenase [cytochrome] OS=Shigella flexneri serotype 5b (strain 8401) GN=lldD PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.313e-20
Identity = 66/208 (31.73%), Postives = 99/208 (47.60%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMXRGNDSG-LAAY 751
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G   R +D G ++AY
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAY 210          
The following BLAST results are available for this feature:
BLAST of EY660171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_ESCF37.948e-2131.73L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ERWCT1.356e-2032.02L-lactate dehydrogenase [cytochrome] OS=Erwinia ca... [more]
LLDD_XANP21.771e-2032.69L-lactate dehydrogenase [cytochrome] OS=Xanthobact... [more]
LLDD_SERP51.771e-2032.02L-lactate dehydrogenase [cytochrome] OS=Serratia p... [more]
LLDD_SALCH1.771e-2031.25L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_CITK81.771e-2031.73L-lactate dehydrogenase [cytochrome] OS=Citrobacte... [more]
LLDD_AZOC51.771e-2031.53L-lactate dehydrogenase [cytochrome] OS=Azorhizobi... [more]
LLDD_SHISS2.313e-2031.73L-lactate dehydrogenase [cytochrome] OS=Shigella s... [more]
LLDD_SHIFL2.313e-2031.73L-lactate dehydrogenase [cytochrome] OS=Shigella f... [more]
LLDD_SHIF82.313e-2031.73L-lactate dehydrogenase [cytochrome] OS=Shigella f... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-C10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660171 ID=EY660171; Name=EY660171; organism=Citrus sinensis; type=EST; length=898bp
CCACGCGTCCGCTTAAATCTCCCTCTATAACTCAGTCTTTGTTCATCATC
GTCTTCTCTCTACTGGTTTCTCTGAATGCACTTTGCTGCACTGTCTTTGT
AAACCTTAGATTAATTTAAGTAGAAAACAGTCAACTGACAAGATGGGAGA
GATCACAAATGTGATGGAGTATGAGGCCATTGCCAAGGAAAAGTTGCCAA
AGATGGTGTTTGATTACTATGCTTCAGGTGCAGAGGACCAGTGGACTTTG
CAAGAGAACAGGAATGCTTTCTCAAGAATCCTGTTTCGACCTCGCATTCT
GATTGATGTAAGCAAAATAGACATGAATACCACTGTCTTGGGCTTCAAGA
TATCGATGCCAATCATGATTGCCCCAACAGCCATGCAGAAGATGGCTCAT
CCTGAAGGGGAGTATGCTACAGCTAGAGCTGCATCGGCTGCTGGAACGAT
TATGACATTGTCTTCGTGGTCTACTTCTAGCGTTGAAGAGGTTGCTTCAA
CAGGACCTGGCATCCGCTTTTTCCAGCTCTATGTGTACAAGGACAGGAAT
GTGGTTGCTCAGCTTGTGAGAAGGGCTGAAAGAGCCGGATTCAAGGCCAT
TGCTCTAACAGTTGATACCCCGAGGCTGGGTCGCAGAGAAGCTGACATCA
AGAACAGATTCACTCTACCACCATTTTTGACATTAAAGAATTTTCAGGGT
TTGGACCTTGGCAAGATGGNACGAGGCAATGACTCTGGGCTTGCTGCCTA
TGNTGCTGGTCAATTGATCGTTCTCTGACCTGGAAGACGTGAAGTGGCTT
CAACAATCACCAATTNGCCAATCTGGTGAGGGTGTACTCCAGCAAAGATG
CGCGGATTGCATTCAGCTGAACAGCTGGGATTATGTATCCATCATGGA
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