EY660171

Overview
NameEY660171
Unique NameEY660171
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_SALHS (L-lactate dehydrogenase [cytochrome] OS=Salmonella heidelberg (strain SL476) GN=lldD PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.313e-20
Identity = 65/208 (31.25%), Postives = 101/208 (48.56%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMXRGNDSG-LAAY 751
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     + +Q +       D+G   R +D G ++AY
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIQRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAY 210          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_SALG2 (L-lactate dehydrogenase [cytochrome] OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=lldD PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.313e-20
Identity = 65/208 (31.25%), Postives = 101/208 (48.56%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMXRGNDSG-LAAY 751
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     + +Q +       D+G   R +D G ++AY
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAY 210          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_SALEP (L-lactate dehydrogenase [cytochrome] OS=Salmonella enteritidis PT4 (strain P125109) GN=lldD PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.313e-20
Identity = 65/208 (31.25%), Postives = 101/208 (48.56%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMXRGNDSG-LAAY 751
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     + +Q +       D+G   R +D G ++AY
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAY 210          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_SALDC (L-lactate dehydrogenase [cytochrome] OS=Salmonella dublin (strain CT_02021853) GN=lldD PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.313e-20
Identity = 65/208 (31.25%), Postives = 101/208 (48.56%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMXRGNDSG-LAAY 751
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     + +Q +       D+G   R +D G ++AY
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAY 210          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_SALAR (L-lactate dehydrogenase [cytochrome] OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=lldD PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.313e-20
Identity = 65/208 (31.25%), Postives = 101/208 (48.56%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMXRGNDSG-LAAY 751
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     + +Q +       D+G   R +D G ++AY
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTLKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAY 210          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_SALA4 (L-lactate dehydrogenase [cytochrome] OS=Salmonella agona (strain SL483) GN=lldD PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.313e-20
Identity = 65/208 (31.25%), Postives = 101/208 (48.56%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMXRGNDSG-LAAY 751
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     + +Q +       D+G   R +D G ++AY
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAY 210          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_ECOSM (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.313e-20
Identity = 66/208 (31.73%), Postives = 99/208 (47.60%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMXRGNDSG-LAAY 751
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G   R +D G ++AY
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAY 210          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_ECOSE (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain SE11) GN=lldD PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.313e-20
Identity = 66/208 (31.73%), Postives = 99/208 (47.60%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMXRGNDSG-LAAY 751
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G   R +D G ++AY
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAY 210          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_ECOLU (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.313e-20
Identity = 66/208 (31.73%), Postives = 99/208 (47.60%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMXRGNDSG-LAAY 751
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G   R +D G ++AY
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAY 210          
BLAST of EY660171 vs. ExPASy Swiss-Prot
Match: LLDD_ECOLI (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain K12) GN=lldD PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.313e-20
Identity = 66/208 (31.73%), Postives = 99/208 (47.60%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMXRGNDSG-LAAY 751
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G   R +D G ++AY
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAY 210          
The following BLAST results are available for this feature:
BLAST of EY660171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_SALHS2.313e-2031.25L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALG22.313e-2031.25L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALEP2.313e-2031.25L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALDC2.313e-2031.25L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALAR2.313e-2031.25L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALA42.313e-2031.25L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_ECOSM2.313e-2031.73L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOSE2.313e-2031.73L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOLU2.313e-2031.73L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOLI2.313e-2031.73L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-C10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660171 ID=EY660171; Name=EY660171; organism=Citrus sinensis; type=EST; length=898bp
CCACGCGTCCGCTTAAATCTCCCTCTATAACTCAGTCTTTGTTCATCATC
GTCTTCTCTCTACTGGTTTCTCTGAATGCACTTTGCTGCACTGTCTTTGT
AAACCTTAGATTAATTTAAGTAGAAAACAGTCAACTGACAAGATGGGAGA
GATCACAAATGTGATGGAGTATGAGGCCATTGCCAAGGAAAAGTTGCCAA
AGATGGTGTTTGATTACTATGCTTCAGGTGCAGAGGACCAGTGGACTTTG
CAAGAGAACAGGAATGCTTTCTCAAGAATCCTGTTTCGACCTCGCATTCT
GATTGATGTAAGCAAAATAGACATGAATACCACTGTCTTGGGCTTCAAGA
TATCGATGCCAATCATGATTGCCCCAACAGCCATGCAGAAGATGGCTCAT
CCTGAAGGGGAGTATGCTACAGCTAGAGCTGCATCGGCTGCTGGAACGAT
TATGACATTGTCTTCGTGGTCTACTTCTAGCGTTGAAGAGGTTGCTTCAA
CAGGACCTGGCATCCGCTTTTTCCAGCTCTATGTGTACAAGGACAGGAAT
GTGGTTGCTCAGCTTGTGAGAAGGGCTGAAAGAGCCGGATTCAAGGCCAT
TGCTCTAACAGTTGATACCCCGAGGCTGGGTCGCAGAGAAGCTGACATCA
AGAACAGATTCACTCTACCACCATTTTTGACATTAAAGAATTTTCAGGGT
TTGGACCTTGGCAAGATGGNACGAGGCAATGACTCTGGGCTTGCTGCCTA
TGNTGCTGGTCAATTGATCGTTCTCTGACCTGGAAGACGTGAAGTGGCTT
CAACAATCACCAATTNGCCAATCTGGTGAGGGTGTACTCCAGCAAAGATG
CGCGGATTGCATTCAGCTGAACAGCTGGGATTATGTATCCATCATGGA
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