EY660169

Overview
NameEY660169
Unique NameEY660169
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3536 contig Csv1_Contig3536:63..959. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY660169 vs. ExPASy Swiss-Prot
Match: E13J_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-O (Fragment) OS=Nicotiana tabacum GN=PR0 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.716e-19
Identity = 57/129 (44.19%), Postives = 75/129 (58.14%), Query Frame = 1 
Query:  523 LDPLITFLNENNSPLLVNLYPYFA-IVGDRQISLDYALFRSQQPVVSDPPLSYQNLFDAQLDATYAALEKAGGGSLDIVISESXXXXXXXXXXXXXXXXXKDLYNNLIQHGKQ--GSPKKP-RAIETYI 897
            ++P+I FL  NN PLL N+YPYF  I     + L YALF  Q+      P  YQNLFDA LD+ Y A+EKAGG +++I++SES                 +  Y NLI H K+  G+PKKP + IETY+
Sbjct:    4 INPIIQFLARNNLPLLANVYPYFGHIYNTADVPLSYALFTQQEA----NPAGYQNLFDALLDSMYFAVEKAGGPNVEIIVSES--GWPSEGNSAATIENAQTYYRNLIDHVKRGAGTPKKPGKTIETYL 126
The following BLAST results are available for this feature:
BLAST of EY660169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
E13J_TOBAC9.716e-1944.19Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-C08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660169 ID=EY660169; Name=EY660169; organism=Citrus sinensis; type=EST; length=897bp
CCACGCGTCCGCTGGGGATGCTACATCGCTACCCTGGACACAACAAGTGC
TCAAATAGGTGTTTGTTATGGAATGCTTGGTGACAACTTGCCATCAAAAC
CAGATGTCATAGCTCTCTATAACCAAAATAACATCAGAAGAATGAGACTC
TATGATCCAAACAAAGAAGCTCTCGAAGCTCTCCGTGGCTCCAACATTGA
AGTCATGCTGGGCGTTCCCAACGATTTTGACCTCCTCCGAAGAATTGCTT
CCAATCAAGCCGAAGCAAATACCTGGGTCCAAGACAACGTCCAAAATTTT
GTTAACAATGTCAAGTTCAAATATATTGCTGTAGGAAATGAAGCAAAACC
AGGAGACGACTTTGCGCAGTATCTTGTACCCGCCATGAGAAACATACAAA
ACGCCATTAACGGAGCTAACCTTGGAAGCCAAATCAAAGTTTCCACAGCC
ATTGCATTCGGAGCTCTTGATAAATCCTCTCCGCCGTCAGCTGGCTCCTT
TAATCAAGATTACAGACCAATTCTCGATCCCCTCATTACCTTCCTTAACG
AAAACAATTCCCCGTTGCTTGTTAACTTGTACCCTTACTTTGCCATCGTT
GGCGACCGTCAAATATCTCTTGATTATGCACTATTTAGGTCCCAACAACC
GGTTGTTTCGGACCCTCCGTTGAGTTACCAGAATCTTTTTGATGCCCAGT
TGGATGCTACTTACGCTGCGTTGGAGAAAGCCGGTGGGGGCTCGTTGGAT
ATTGTGATATCNGAGAGTGGGTGGGCGACGGCAGGTGGTGACGGAGCGNT
AACGAATGTCGATAATGCAAAGGACCTATATAATAACTTGATACAGCATG
GGAAGCAAGGATCACCAAAGAAGCCAAGGGCTATTGAGACTTACATT
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