EY660164

Overview
NameEY660164
Unique NameEY660164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length896
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660164 vs. ExPASy Swiss-Prot
Match: XTH1_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.864e-54
Identity = 101/210 (48.10%), Postives = 139/210 (66.19%), Query Frame = 1
Query:    4 RVRIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 627
            ++RIK+ P D++G VTAFY+ S   N  DE+DFEFLGN+ G+   VQTN++ NGKG+REQ++ LWFDP+ D+H Y ILWN + IV YVD++P+RV+KN  S    +P ++PM V  +LW  ++WAT GG  KI+WS APF A ++ F+  GC      N   +   WW   +Y  L+  E + Y  VR  +M YDYC+DK R+ VPP EC
Sbjct:   85 QIRIKVPPKDTSGVVTAFYLTSKG-NTHDEVDFEFLGNKEGK-LAVQTNVFTNGKGNREQKLALWFDPSKDFHTYAILWNPYQIVLYVDNIPVRVFKNTTSQGMNYP-SKPMQVVVSLWNGENWATDGGKSKINWSLAPFKANFQGFNNSGCFTNAEKNACGSSAYWWNTGSYSKLSDSEQKAYTNVRQKYMNYDYCSDKVRFHVPPSEC 291          
BLAST of EY660164 vs. ExPASy Swiss-Prot
Match: XTH26_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 26 OS=Arabidopsis thaliana GN=XTH26 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.519e-51
Identity = 101/213 (47.42%), Postives = 138/213 (64.79%), Query Frame = 1
Query:   13 IKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCAS--NP---GNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYP-VPPPEC 627
            IKLVPG+SAGTV A+Y++S T +  DE+DFEFLGN TGQPYT+ TN+YA GKG+REQ+   WF+P   +H YTI WN   +V++VD  PIRV++N  S    +P  Q M V+++LW A+DWAT+GG  K +W+ APF A  R +    C   G  +     +P    NWW + ++  LTA +  + + +R   MIYDYC D +R+  V PPEC
Sbjct:   76 IKLVPGNSAGTVAAYYLSS-TGSTHDEIDFEFLGNATGQPYTIHTNLYAQGKGNREQQFRPWFNPTNGFHNYTIHWNPSEVVWFVDGTPIRVFRNYESEGIAYPNKQGMKVFASLWNAEDWATQGGRVKTNWTLAPFVAEGRRYKARACLWKGSVSIKQCVDPTIRSNWWTSPSFSQLTASQLTKMQKIRDGFMIYDYCKDTNRFKGVMPPEC 287          
BLAST of EY660164 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.613e-51
Identity = 103/228 (45.18%), Postives = 138/228 (60.53%), Query Frame = 1
Query:    7 VRIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGC----------------PVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVP-PPECLA 633
            ++IKLVPG+SAGTVT FY+ S      DE+DFEFLGN +G PY V TN+Y  GKGDREQ+  LWFDP A +H Y+ILWN  HIVFY+D  PIR +KN       +P NQPM +Y +LW ADDWATRGGL K +WS+ PF A + +++ E                  P    ++ +S+   W+   + + + +   +  RWV+   M+Y+YC DK R+    P EC A
Sbjct:   75 MQIKLVPGNSAGTVTTFYLKSQGLTW-DEIDFEFLGNVSGDPYIVHTNVYTQGKGDREQQFYLWFDPTAAFHNYSILWNPSHIVFYIDGKPIREFKNLEVLGVAYPKNQPMRMYGSLWNADDWATRGGLVKTNWSQGPFVASFMNYNSENACVWSIVNGTTTTSPCSPGDSTSSSSSSTSEWF---SQRGMDSSSKKVLRWVQRKFMVYNYCKDKKRFSNGLPVECTA 298          
BLAST of EY660164 vs. ExPASy Swiss-Prot
Match: XTH8_ORYSJ (Xyloglucan endotransglycosylase/hydrolase protein 8 OS=Oryza sativa subsp. japonica GN=XTH8 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.405e-48
Identity = 92/214 (42.99%), Postives = 126/214 (58.88%), Query Frame = 1
Query:    7 VRIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN------CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVP-PPEC 627
            V++KLV G+SAGTVT+FY++S   +  DE+D EF+GN +G PY + TN++ANG G +E +  LWFDP AD+H Y I+WN  +I+F VDDVP+R +K      +P ++PM +++TLW+   WATR G  KIDWS APF   YR +    C    PA       C      W     ++ L   E     W   N+M Y+YC D  R+P   P EC
Sbjct:   78 VQMKLVGGNSAGTVTSFYLSSGEGDGHDEIDIEFMGNLSGNPYVMNTNVWANGDGKKEHQFYLWFDPTADFHTYKIIWNPQNIIFQVDDVPVRTFKKYDDLAYPQSKPMRLHATLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNACVNNNPAGGWSSSWCPEGTSAW----IHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAEC 287          
BLAST of EY660164 vs. ExPASy Swiss-Prot
Match: XTH31_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 31 OS=Arabidopsis thaliana GN=XTH31 PE=2 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 2.983e-44
Identity = 89/212 (41.98%), Postives = 123/212 (58.02%), Query Frame = 1
Query:   13 IKLVPGDSAGTVTAFYMNSNTENV--RDELDFEFLGNRTGQPYTVQTNIYANGKGDR-----EQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 627
            IKL PG +AG  T+ Y+++N E+    DE+D EFLG   G+PY++QTN++  G GDR     E +  LWFDP  D+H Y ILWN + IVF+VDDVPIR Y     A FP  +PM VY ++W+A DWAT  G  K D+   PF A Y++F + GC     ++C   P +     N + L+  +     W + N ++Y+YC D  R     PEC
Sbjct:   86 IKLQPGFTAGVDTSLYLSNNQEHPGDHDEVDIEFLGTTPGKPYSLQTNVFVRGSGDRNVIGREMKFTLWFDPTQDFHHYAILWNPNQIVFFVDDVPIRTYNRKNEAIFP-TRPMWVYGSIWDASDWATENGRIKADYRYQPFVAKYKNFKLAGCTADSSSSC--RPPSPAPMRN-RGLSRQQMAALTWAQRNFLVYNYCHDPKRDHTQTPEC 293          
BLAST of EY660164 vs. ExPASy Swiss-Prot
Match: XTH30_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana GN=XTH30 PE=2 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 8.679e-44
Identity = 92/215 (42.79%), Postives = 128/215 (59.53%), Query Frame = 1
Query:   13 IKLVPGDSAGTVTAFYMNSNT--ENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDR--EQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIR-VYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPG----PANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECL 630
            IKL    +AG V AFY ++    E   DELD EFLGN  G+P+  QTN+Y NG   R  E+R  LWFDP+ ++H Y+ILW  H I+F+VDDVPIR V +N         +PM +Y+T+W+A DWAT GG  K ++  APF A ++ F ++GC V      P +C S+  ++ E+ +Y ++ + +    R  R   M Y YC D  RYP P PEC+
Sbjct:   81 IKLPADYTAGVVVAFYTSNGDVFEKTHDELDIEFLGNIKGKPWRFQTNLYGNGSTHRGREERYRLWFDPSKEFHRYSILWTPHKIIFWVDDVPIREVIRNDAMGADYPAKPMALYATIWDASDWATSGGKYKANYKFAPFVAEFKSFSLDGCSVDPIQEVPMDC-SDSVDFLESQDYSSINSHQRAAMRRFRQRFMYYSYCYDTLRYPEPLPECV 294          
BLAST of EY660164 vs. ExPASy Swiss-Prot
Match: XTH32_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 32 OS=Arabidopsis thaliana GN=XTH32 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 2.138e-42
Identity = 86/212 (40.57%), Postives = 120/212 (56.60%), Query Frame = 1
Query:   13 IKLVPGDSAGTVTAFYMNSNTEN--VRDELDFEFLGNRTGQPYTVQTNIYANGKGD-----REQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 627
            IKL PG +AG +T+ Y+++N  +    DE+D EFLG   G+PYT+QTN+Y  G GD     RE +  LWFDP  D+H Y ILW+   I+F VDD+PIR Y     + FP+ +PM +Y ++W+A  WAT  G  K D+   PF A Y +F   GC     A C     + + +     LT  + +  RWV+ + M+Y+YC D  R     PEC
Sbjct:   90 IKLQPGYTAGVITSLYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIIGREMKFRLWFDPTKDFHHYAILWSPREIIFLVDDIPIRRYPKKSASTFPL-RPMWLYGSIWDASSWATEDGKYKADYKYQPFTAKYTNFKALGCTAYSSARCYPLSASPYRSG---GLTRQQHQAMRWVQTHSMVYNYCKDYKRDHSLTPEC 297          
BLAST of EY660164 vs. ExPASy Swiss-Prot
Match: XTH29_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 29 OS=Arabidopsis thaliana GN=XTH29 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.364e-41
Identity = 93/227 (40.97%), Postives = 133/227 (58.59%), Query Frame = 1
Query:   13 IKLVPGDSAGTVTAFYMNSNTENVRD--ELDFEFLGNRTGQPYTVQTNIYANGKGDR--EQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIR--VYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPV----PGPANCASNPGNW-----------WEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECL 630
            IKL    +AG V AFY ++    V+D  ELD EFLGN  G+P+  QTN+Y NG  +R  E+R  LWFDP+ ++H Y+ILW    I+F+VDDVPIR  + K      +P  +PM +Y+T+W+A  WAT GG   +D++ +PF + ++D  ++GC V    PG  N  +N GN+             +N+Y  ++  +A   R  R  +M Y YC D  RY VPPPEC+
Sbjct:   89 IKLPGAYTAGIVVAFYTSNGDVFVKDHDELDIEFLGNLEGKPWRFQTNMYGNGSTNRGREERYRLWFDPSKEFHRYSILWTPTKIIFWVDDVPIREILRKEEMNGDYP-QKPMSLYATIWDASSWATSGGKFGVDYTFSPFVSEFKDIALDGCNVSDSFPGENN-NNNIGNYNNINCSVSDQFLMSNDYSTISPKQATAMRRFRERYMYYSYCYDTIRYSVPPPECV 313          
BLAST of EY660164 vs. ExPASy Swiss-Prot
Match: XTH27_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis thaliana GN=XTH27 PE=2 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 6.437e-39
Identity = 88/213 (41.31%), Postives = 122/213 (57.28%), Query Frame = 1
Query:   13 IKLVPGDSAGTVTAFYMNSNT--ENVRDELDFEFLGNRTGQPYTVQTNIYANGK--GDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPV-PGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECL 630
            IKL    +AG V AFYM++    E   DE+DFEFLGN   + + VQTNIY NG     RE+R NLWFDP  D+H Y+ILW+  HI+F+VD+VPIR  K +      FP ++PM +Y+T+W+   WAT GG   +++  AP+ A + D  + GCPV P       + G   +    Q +T  +  +    R   M Y YC D++RY V   EC+
Sbjct:   80 IKLPSDYTAGVVVAFYMSNGDMYEKNHDEIDFEFLGNIREKEWRVQTNIYGNGSTHSGREERYNLWFDPTEDFHQYSILWSDSHIIFFVDNVPIREVKRTAEMGGHFP-SKPMSLYTTIWDGSKWATNGGKYGVNYKYAPYIARFSDLVLHGCPVDPIEQFPRCDEGAAEDMRAAQEITPSQRSKMDVFRRRLMTYSYCYDRARYNVALSECV 291          
BLAST of EY660164 vs. ExPASy Swiss-Prot
Match: XTH33_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana GN=XTH33 PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 8.406e-39
Identity = 83/223 (37.22%), Postives = 123/223 (55.16%), Query Frame = 1
Query:   10 RIKLVPGDSAGTVTAFYMNSNTENV---RDELDFEFLGNRTGQPYTVQTNIYANG--KGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPV-----PGPANCASNPGNW-----WEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 627
            R+KL  G ++G V AFY+ SN E      DE+D E LG      +T+QTN+YANG  +  RE++   WFDP   +H YT++WN HH VF VD++P+R + N G   + +P ++PM +Y T+W+  +WAT+GG   +++  APF     D ++ GC V      G   C  + G+       +  ++  L+  +     W R   M Y YC+DK RY V P EC
Sbjct:   89 RLKLPAGFASGVVVAFYL-SNAETYPKSHDEIDIELLGRSRRDDWTIQTNVYANGSTRTGREEKFYFWFDPTQAFHDYTLIWNSHHTVFLVDNIPVRQFPNRGAFTSAYP-SKPMSLYVTVWDGSEWATKGGKYPVNYKYAPFVVSVADVELSGCSVNNGSSTGSGPCTKSGGSISSLDPVDGQDFATLSKNQINAMDWARRKLMFYSYCSDKPRYKVMPAEC 309          
The following BLAST results are available for this feature:
BLAST of EY660164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
XTH1_ARATH1.864e-5448.10Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH26_ARATH2.519e-5147.42Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH21_ARATH5.613e-5145.18Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH8_ORYSJ3.405e-4842.99Xyloglucan endotransglycosylase/hydrolase protein ... [more]
XTH31_ARATH2.983e-4441.98Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH30_ARATH8.679e-4442.79Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH32_ARATH2.138e-4240.57Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH29_ARATH2.364e-4140.97Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH27_ARATH6.437e-3941.31Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH33_ARATH8.406e-3937.22Probable xyloglucan endotransglucosylase/hydrolase... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660164 ID=EY660164; Name=EY660164; organism=Citrus sinensis; type=EST; length=896bp
CCACGCGTCCGGATCAAGCTCGTTCCTGGAGACTCTGCTGGAACTGTCAC
TGCATTTTATATGAATTCCAACACCGAAAATGTGAGAGACGAGCTTGATT
TTGAGTTCCTGGGAAACCGAACGGGTCAGCCTTACACGGTCCAGACCAAT
ATCTATGCAAATGGAAAAGGCGATAGAGAACAGAGAGTGAACCTCTGGTT
TGACCCTGCTGCAGATTATCACCTTTACACTATTCTCTGGAACCATCACC
ATATTGTCTTCTATGTGGATGATGTGCCCATCAGGGTTTACAAAAACAGT
GGAAGGGCTCCATTTCCAATGAACCAACCCATGGGGGTGTATTCGACGCT
GTGGGAAGCAGATGACTGGGCAACAAGAGGTGGTCTAGAGAAAATAGATT
GGAGCAAAGCTCCTTTTTATGCTTATTACAGAGACTTTGATATTGAGGGC
TGCCCAGTTCCTGGACCAGCAAACTGTGCCTCGAACCCAGGTAACTGGTG
GGAGGCAAATAATTATCAAGCCCTCACCGCCATGGAAGCAAGAAGATACA
GATGGGTTCGTCTCAACCACATGATCTATGATTATTGCACTGATAAATCA
AGATACCCAGTACCCCCACCGGAATGCCTTGCCGGCATATAAATTCAACC
TGCCAATTAATTAAGCAGTTGGACGGTACTCCATATCCGTATCATATCAT
GTATATTACTTCACGTACACGTCCTTTGTATTATTCCCTATTCGTGTGAA
AAGACTTATACGCATATCAGGGGAGGGGCAGGAGGGGAAATAAACATCGT
GGGCTCTTAATGTGGATATGGGAGTGGGAATATGTGGGTATTCTGCTTCG
CTTGTACATATATAAGTCTGAATTTGATGCACAGGATCTGTAGCCA
back to top