EY660156

Overview
NameEY660156
Unique NameEY660156
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: ADH1_COTJA (Alcohol dehydrogenase 1 OS=Coturnix coturnix japonica GN=ADH1 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.075e-32
Identity = 85/246 (34.55%), Postives = 114/246 (46.34%), Query Frame = 3
Query:  114 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPW-MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRQQM*RXXXXXXXXXXXXXD*XFIDIFWDQVAKGARLCGATRIIGVDVISEKFEIGKRFG 848
            TAGK I+C+AA+     +P  ++EV V PP +HEVR++I+ T +C SD            FP ILGHEA                    IP F+  C EC  C S KGNLC       SP  +  D T+RF   +G+ IHHF+  S+F+EYTV+      K+D   P  + CL+ CG STG GA  +                             V  G +  GA+RII +D+  +KF   K  G
Sbjct:    2 TAGKVIKCKAAVLWEANKPFSLEEVEVAPPKAHEVRIKIVATGICRSD-DHVVTGALAMPFPVILGHEAAGVVESVGEKVTLLKPGDAVIPLFVPQCGECRSCLSTKGNLCIKNDLSSSPTGLMADGTTRFT-CKGKAIHHFIGTSTFTEYTVVHETAAAKIDSAAPLEKVCLIGCGFSTGYGAVLQTAKVEPGSTCAVFGLGGVG--------LSVVMGCKAAGASRIIAIDINKDKFAKAKELG 237          
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: ADHX_CAEEL (Alcohol dehydrogenase class-3 OS=Caenorhabditis elegans GN=H24K24.3 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.951e-32
Identity = 82/247 (33.20%), Postives = 118/247 (47.77%), Query Frame = 3
Query:  108 NKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRQQM*RXXXXXXXXXXXXXD*XFIDIFWDQVAKGARLCGATRIIGVDVISEKFEIGKRFG 848
            + TAG+ I C+AA+A +   PL I+ + V PP +HEVRV+I+ T++CH+D       D   +FP +LGHE                     +P ++  C EC  C++ K NLC             D +SRF    G+ + HF+  S+FSEYTV+    + KV+P  P  +  LL CG+STG GA                         +      V  GA+  GA +I+G+D+I  KFE  K FG
Sbjct:    2 SSTAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEGLFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQGNGFMPDGSSRF-TCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGISTGYGAVLNTCKVEEGSTVAVWG--------LGAVGLAVIMGAKAAGAKKIVGIDLIESKFESAKFFG 239          
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: ADH1_CHICK (Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 6.951e-32
Identity = 86/246 (34.96%), Postives = 113/246 (45.93%), Query Frame = 3
Query:  114 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPW-MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRQQM*RXXXXXXXXXXXXXD*XFIDIFWDQVAKGARLCGATRIIGVDVISEKFEIGKRFG 848
            T GK I+C+AA+     +P  ++EV V PP +HEVR++I+ T +C SD            FP ILGHEA                    IP F+  C EC  C S KGNLC       SP  +  D T+RF   +G+ IHHFV  S+F+EYTV+      K+D   P  + CL+ CG STG GA  +                             V  G +  GA+RII VD+  +KF   K  G
Sbjct:    3 TVGKVIKCKAAVLWEANKPFSLEEVEVAPPKAHEVRIKIVATGICRSD-DHVVTGALAMPFPIILGHEAAGVIESVGEKVTSLKPGDAVIPLFVPQCGECRSCLSTKGNLCIKNDLSSSPTGLMADGTTRFT-CKGKAIHHFVGTSTFTEYTVVHETAAAKIDSAAPLEKVCLIGCGFSTGYGAVLQTAKVEAGSTCAVFGLGGVG--------LSVVMGCKAAGASRIIAVDINKDKFAKAKELG 238          
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: ADH1_ALLMI (Alcohol dehydrogenase 1 OS=Alligator mississippiensis PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.951e-32
Identity = 86/247 (34.82%), Postives = 116/247 (46.96%), Query Frame = 3
Query:  114 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSD--VTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRQQM*RXXXXXXXXXXXXXD*XFIDIFWDQVAKGARLCGATRIIGVDVISEKFEIGKRFG 848
            TAGK I+C+AAI     +P  I+E+ V PP +HEVR++I+ T +C SD  VT   +       P ILGHEA                    IP F+  C EC+ C    GNLC          +  D TSRF   +G+ IHHF+  S+F+EYTV+    V ++D   P  + CL+ CG STG GAA +                      I         G +  GA+RIIG+D+  +KF   K  G
Sbjct:    2 TAGKVIKCKAAITWEIKKPFSIEEIEVAPPKAHEVRIKILATGICRSDDHVTAGLLT---MPLPMILGHEAAGVVESTGEGVTSLKPGDKVIPLFVPQCGECMPCLKSNGNLCIRNDLGSPSGLMADGTSRFT-CKGKDIHHFIGTSTFTEYTVVHETAVARIDAAAPLEKVCLIGCGFSTGYGAAVKDAKVEPGSTCAVFGLGGVGLSTI--------MGCKAAGASRIIGIDINKDKFAKAKELG 236          
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: ADH4_STRCA (Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH4 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.078e-32
Identity = 82/249 (32.93%), Postives = 117/249 (46.99%), Query Frame = 3
Query:  114 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR----DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRQQM*RXXXXXXXXXXXXXD*XFIDIFWDQVAKGARLCGATRIIGVDVISEKFEIGKRFG 848
            T GK I+C+AAIA   G+PL ++E+ V PP  HEVRV+I+ T +C +D           VFP ILGHE                     IP ++  C  C  C + K NLC       +P   +    D TSRF   +G+ I+HF+  S+FSEYTV+  + + K+D   P ++ CL+ CG STG GAA                                  G +  GA++I G+D+  +KF + K+ G
Sbjct:    2 TEGKVIKCKAAIAWEAGKPLSVEEIEVSPPKDHEVRVKIVATGVCRTDEHAINPSFKEGVFPVILGHEGAGIVESIGQGVSKFKPGDKVIPLYMPQCGHCKFCLNPKTNLCEKISKIKTPISDQEVMSDGTSRF-TCKGKPIYHFMGTSTFSEYTVVSESSLAKIDAAAPLDKVCLIGCGFSTGYGAAINTAQVEPGSTCAVFGLGGVG--------LSAVMGCKAAGASKIFGIDINKDKFPLAKKLG 241          
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: FRMA_ECOUT (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.450e-31
Identity = 82/240 (34.17%), Postives = 116/240 (48.33%), Query Frame = 3
Query:  129 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRQQM*RXXXXXXXXXXXXXD*XFIDIFWDQVAKGARLCGATRIIGVDVISEKFEIGKRFG 848
            ++ RAA+A APG+PL I E+ V PP   EV +++  T +CH+D       D   VFP +LGHE                     IP + A+C EC  CRS K NLC A        +  D T+RF    G+ ++H++  S+FSEYTV+    + K++P       CLL CGV+TG+GA       +                 +      V +GAR   A RII +D   +KFE+ +RFG
Sbjct:    1 MKSRAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRF-SYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFG--------LGAIGLAVVQGARQAKAGRIIAIDTNPKKFELARRFG 231          
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: FRMA_ECOL5 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.450e-31
Identity = 82/240 (34.17%), Postives = 116/240 (48.33%), Query Frame = 3
Query:  129 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRQQM*RXXXXXXXXXXXXXD*XFIDIFWDQVAKGARLCGATRIIGVDVISEKFEIGKRFG 848
            ++ RAA+A APG+PL I E+ V PP   EV +++  T +CH+D       D   VFP +LGHE                     IP + A+C EC  CRS K NLC A        +  D T+RF    G+ ++H++  S+FSEYTV+    + K++P       CLL CGV+TG+GA       +                 +      V +GAR   A RII +D   +KFE+ +RFG
Sbjct:    1 MKSRAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRF-SYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFG--------LGAIGLAVVQGARQAKAGRIIAIDTNPKKFELARRFG 231          
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: FRMA_ECOK1 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O1:K1 / APEC GN=frmA PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.450e-31
Identity = 82/240 (34.17%), Postives = 116/240 (48.33%), Query Frame = 3
Query:  129 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRQQM*RXXXXXXXXXXXXXD*XFIDIFWDQVAKGARLCGATRIIGVDVISEKFEIGKRFG 848
            ++ RAA+A APG+PL I E+ V PP   EV +++  T +CH+D       D   VFP +LGHE                     IP + A+C EC  CRS K NLC A        +  D T+RF    G+ ++H++  S+FSEYTV+    + K++P       CLL CGV+TG+GA       +                 +      V +GAR   A RII +D   +KFE+ +RFG
Sbjct:    1 MKSRAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRF-SYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFG--------LGAIGLAVVQGARQAKAGRIIAIDTNPKKFELARRFG 231          
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: ADH1_GADCA (Alcohol dehydrogenase 1 OS=Gadus callarias PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.506e-31
Identity = 84/245 (34.29%), Postives = 119/245 (48.57%), Query Frame = 3
Query:  114 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRQQM*RXXXXXXXXXXXXXD*XFIDIFWDQVAKGARLCGATRIIGVDVISEKFEIGKRFG 848
            T GK I+C+AA+A    +PLVI+E+ VD P+++E+R++II T +CH+D+           FP +LGHE                     IP F++ C EC  C+S K N C       SP +   + +RF   +G  +  F+  S+FS+YTV++   V K+DP+ P +  CLL CGVSTG GAA                        +         G    GA RII VD+  +KFE  K FG
Sbjct:    2 TVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRF-TCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFG--------LGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFG 237          
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: ADHQ_RABIT (Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctolagus cuniculus GN=ADH2-2 PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 5.884e-31
Identity = 86/249 (34.54%), Postives = 120/249 (48.19%), Query Frame = 3
Query:  114 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR----DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRQQM*RXXXXXXXXXXXXXD*XFIDIFWDQVAKGARLCGATRIIGVDVISEKFEIGKRFG 848
            T GK I+C+AAIA   G+PL I+EV V PP +HEVRV+II  S+C SD           + P ILGHE                     IP ++  C +C  C+S   N C+ F    +P + +    D+TSRF   +G++I+HF+ +S+FS+YTV+   ++ K+D      R CL+ CG STG GAA                                  G +  GA+RII VD+ S+KF   K  G
Sbjct:    3 TKGKVIKCKAAIAWEAGKPLSIEEVEVAPPKAHEVRVQIIAASVCRSDTYVINPAFKEGLLPVILGHECAGIVESVGPGVNNFKPGDKVIPLYVPHCRKCKFCQSPLTNFCTKFSEHKNPIIEQELMDDKTSRF-TCKGKSIYHFLGISAFSQYTVVKDINLAKIDDDANLKRVCLIGCGFSTGYGAAINDAKVTPGSTCAVFGLGGVG--------LSAVIGCKTAGASRIIAVDINSDKFAKAKALG 242          
The following BLAST results are available for this feature:
BLAST of EY660156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
ADH1_COTJA4.075e-3234.55Alcohol dehydrogenase 1 OS=Coturnix coturnix japon... [more]
ADHX_CAEEL6.951e-3233.20Alcohol dehydrogenase class-3 OS=Caenorhabditis el... [more]
ADH1_CHICK6.951e-3234.96Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 P... [more]
ADH1_ALLMI6.951e-3234.82Alcohol dehydrogenase 1 OS=Alligator mississippien... [more]
ADH4_STRCA9.078e-3232.93Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH... [more]
FRMA_ECOUT3.450e-3134.17S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOL53.450e-3134.17S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOK13.450e-3134.17S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
ADH1_GADCA4.506e-3134.29Alcohol dehydrogenase 1 OS=Gadus callarias PE=1 SV... [more]
ADHQ_RABIT5.884e-3134.54Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctol... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660156 ID=EY660156; Name=EY660156; organism=Citrus sinensis; type=EST; length=850bp
CCACGCGTCCGACTGCACCAGCCACCCTCTACTCACTCACTTTTCTTACA
GGAAAAAGCCAAAACAACTCTTAAACTATCTCCGGCATGGACATTGAGAA
ACCGTCGAATAAAACCGCCGGGAAACCAATTCAATGCAGAGCCGCAATCG
CTACAGCTCCAGGAGAGCCTCTGGTTATAGACGAGGTTATCGTCGACCCT
CCAAATTCCCACGAAGTTCGGGTTCGGATAATCTGTACTAGTCTCTGTCA
CAGTGACGTCACCTTCTGGAAAATGAAGGATTTTCCAGCCGTGTTTCCAA
GAATTCTCGGTCACGAGGCTATCGGAGTTGTGGAGAGTGTTGGGGAGAAT
GTAGATGGAGTGGTTGAAGGAGACGTTGTCATCCCGCACTTTCTGGCAGA
TTGTACAGAATGTGTAGGTTGTAGATCAAAGAAGGGCAACCTATGTTCAG
CATTTCCTTTCAAGATCTCTCCTTGGATGCCAAGGGATCAGACAAGCAGA
TTCAAAGACCTCAGAGGAGAGACTATACACCATTTTGTCTCTGTTTCAAG
TTTTTCTGAGTATACTGTTCTAGATATTGCCCATGTAGTCAAAGTTGATC
CTACAGTCCCTCCAAATAGGGCTTGCCTTCTAAGCTGTGGAGTATCAACA
GGCGTGGGAGCTGCTTGGAGACAGCAAATGTAGAGGTTGGGATCACTGTT
GNTATATTTGGGCTTGGNTCAATTGGATTAGCNGTTCATAGATATCTTTT
GGGATCAAGTTGCAAAGGGAGCGAGATTATGTGGTGCTACCAGGATTATA
GGCGTGGATGTGATCTCGGAAAAATTTGAAATTGGAAAAAGGTTTGGNAG
back to top