EY660156

Overview
NameEY660156
Unique NameEY660156
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: FADH_CANMA (S-(hydroxymethyl)glutathione dehydrogenase OS=Candida maltosa GN=FDH1 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.920e-30
Identity = 85/248 (34.27%), Postives = 118/248 (47.58%), Query Frame = 3
Query:  105 SNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRQQM*RXXXXXXXXXXXXXD*XFIDIFWDQVAKGARLCGATRIIGVDVISEKFEIGKRFG 848
            S  T GKPI C+AA+A    +PL I++V V PP  HEVR+++  T +CH+D       D    FP ILGHE                     I  +  +C EC  C+S K NLC          +  D TSRF   +G+ I HF+  S+FS+YTV+    VV ++P    ++ACLL CG++TG GAA      +                   I    V +G    GA +II VD+  +K E G++ G
Sbjct:    2 SESTVGKPITCKAAVAWEAAKPLSIEDVTVAPPKRHEVRIKLYDTGVCHTDAYTLSGVDPEGAFPVILGHEGAGIVESIGEGVTNVKVGDHVIALYTPECGECKFCKSGKTNLCGKIRATQGKGVMPDGTSRF-TCKGKEILHFMGCSTFSQYTVVADISVVAINPKAEFDKACLLGCGITTGYGAATITANVQKGDNVAVFGG--------GIVGLSVIQGCAERGAAQIILVDISDKKEEWGQKLG 240          
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: ADHP_RABIT (Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctolagus cuniculus GN=ADH2-1 PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.920e-30
Identity = 87/249 (34.94%), Postives = 117/249 (46.99%), Query Frame = 3
Query:  114 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR----DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRQQM*RXXXXXXXXXXXXXD*XFIDIFWDQVAKGARLCGATRIIGVDVISEKFEIGKRFG 848
            T GK I+C+AAIA   G+PL I+EV V PP +HEVRV+I    LC SD      K   A  P ILGHE                     IP ++  C +C  C S   N C  F    +P + +    D+TSRF   +G++I+HF  +S+FS+YTV+   ++ K+D      R CL+ CG STG GAA                        I         G +  GA+RII +D+ S+KF   K  G
Sbjct:    3 TKGKVIKCKAAIAWEAGKPLSIEEVEVAPPKAHEVRVQINAAGLCRSDTHVINPKFEGAFLPVILGHEGAGIVESVGPGVTNVKPGDKVIPLYIPHCKKCKFCLSPLTNFCEKFCKGKNPLIEQELMEDKTSRF-TCKGKSIYHFFGISAFSQYTVVKDVNLAKIDDDANLERVCLIGCGFSTGYGAAINTAKVTPGSTCAVFGLGGVGLSAI--------MGCKTAGASRIIAIDINSDKFAKAKALG 242          
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: ADH8_RANPE (NADP-dependent alcohol dehydrogenase OS=Rana perezi GN=ADH8 PE=1 SV=3)

HSP 1 Score: 132.494 bits (332), Expect = 2.920e-30
Identity = 83/238 (34.87%), Postives = 116/238 (48.74%), Query Frame = 3
Query:  114 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRQQM*RXXXXXXXXXXXXXD*XFIDIFWDQVAKGARLCGATRIIGVDVISEKF 827
            TAGK I C+AA+A  P +PL ++ + V PP +HEVR++I+ + +C SD +  K +  P+ FP ILGHEA+                   IP F+  C  C  C+S   N C          +  D TSRF   RG+ I++ V  S+F+EYTV+    V K+DP   P  +CL+ CG +TG GAA      +                F  I       G +  GA+RIIGV    +KF
Sbjct:    3 TAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLK-EIIPSKFPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRF-TCRGKPIYNLVGTSTFTEYTVVADIAVAKIDPKA-PLESCLIGCGFATGYGAAVNTA--KVTPGSTCAVFGLGGVGFSAIV------GCKAAGASRIIGVGTHKDKF 229          
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: ADH1E_HORSE (Alcohol dehydrogenase E chain OS=Equus caballus PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.920e-30
Identity = 83/245 (33.88%), Postives = 112/245 (45.71%), Query Frame = 3
Query:  114 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRQQM*RXXXXXXXXXXXXXD*XFIDIFWDQVAKGARLCGATRIIGVDVISEKFEIGKRFG 848
            TAGK I+C+AA+     +P  I+EV V PP +HEVR++++ T +C SD             P I GHEA                    IP F   C +C  C+  +GN C      +     +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG G+A +                             V  G +  GA RIIGVD+  +KF   K  G
Sbjct:    3 TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHVVSGTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVG--------LSVIMGCKAAGAARIIGVDINKDKFAKAKEVG 237          
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: FADH_PICPA (S-(hydroxymethyl)glutathione dehydrogenase OS=Pichia pastoris GN=FLD1 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 5.245e-30
Identity = 68/184 (36.96%), Postives = 96/184 (52.17%), Query Frame = 3
Query:  114 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAA 665
            T G+ I+C+AA+A   G+ L I+E+ V PP +HEVRV++  T +CH+D       D    FP + GHE                     +  +  +C EC  C S K NLC          +  D TSRF+  +G+ + H++  SSFS+YTV+    VVKV    P ++ CLL CGV+TG GAA
Sbjct:    3 TEGQIIKCKAAVAWEAGKDLSIEEIEVLPPRAHEVRVKVEFTGVCHTDAYTLSGADAEGSFPVVFGHEGAGVVESVGEGVESVKVGDSVVLLYTPECRECKFCLSGKTNLCGKIRATQGKGLLPDGTSRFR-CKGKDLFHYMGCSSFSQYTVVADISVVKVQDEAPKDKTCLLGCGVTTGYGAA 185          

HSP 2 Score: 29.261 bits (64), Expect = 5.245e-30
Identity = 17/43 (39.53%), Postives = 26/43 (60.47%), Query Frame = 2
Query:  656 GSCLETANVEVGITVXIFGLGSIGLAVHRYLLGSSCKG-SEIM 781
            G+ + TA +  G  + +FG G IGL+V   + G+  KG SEI+
Sbjct:  183 GAAINTAKISKGDKIGVFGAGCIGLSV---IQGAVSKGASEII 222          
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: ADH1S_HORSE (Alcohol dehydrogenase S chain OS=Equus caballus PE=1 SV=3)

HSP 1 Score: 131.339 bits (329), Expect = 6.506e-30
Identity = 87/249 (34.94%), Postives = 116/249 (46.59%), Query Frame = 3
Query:  114 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR----DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRQQM*RXXXXXXXXXXXXXD*XFIDIFWDQVAKGARLCGATRIIGVDVISEKFEIGKRFG 848
            TAGK I+C+AA+     +P  I+EV V PP +HEVR++++   +C SD          A  P I GHEA                    IP F+  C +C  C+  +GNLC       +  MPR    D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG G+A +                             V  G +  GA RIIGVD+  +KF   K  G
Sbjct:    3 TAGKVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSD-DHVVSGTLVAPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLK-----NLSMPRGTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVG--------LSVIMGCKAAGAARIIGVDINKDKFAKAKEVG 236          
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: ADH1_RAT (Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Adh1 PE=1 SV=3)

HSP 1 Score: 130.568 bits (327), Expect = 1.110e-29
Identity = 83/246 (33.74%), Postives = 117/246 (47.56%), Query Frame = 3
Query:  114 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP-WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRQQM*RXXXXXXXXXXXXXD*XFIDIFWDQVAKGARLCGATRIIGVDVISEKFEIGKRFG 848
            TAGK I+C+AA+   P +P  I+++ V PP +HEVR++++ T +C SD        F  + P +LGHE                     IP F   C +C  C+  + NLC        P     D TSRF   RG+ IHHF+S S+FS+YTV+D   V K+D   P ++ CL+ CG STG G+A   Q+ +                        V  G +  GA +II VD+  +KF   K  G
Sbjct:    3 TAGKVIKCKAAVLWEPHKPFTIEDIEVAPPKAHEVRIKMVATGVCRSDDHAVSGSLFTPL-PAVLGHEGAGIVESIGEGVTCVKPGDKVIPLFSPQCGKCRICKHPESNLCCQTKNLTQPKGALLDGTSRFS-CRGKPIHHFISTSTFSQYTVVDDIAVAKIDAAAPLDKVCLIGCGFSTGYGSA--VQVAKVTPGSTCAVFGLGGVGL------SVVIGCKTAGAAKIIAVDINKDKFAKAKELG 238          
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: FRMA_HAEIN (S-(hydroxymethyl)glutathione dehydrogenase OS=Haemophilus influenzae GN=frmA PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.449e-29
Identity = 82/246 (33.33%), Postives = 116/246 (47.15%), Query Frame = 3
Query:  111 KTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRQQM*RXXXXXXXXXXXXXD*XFIDIFWDQVAKGARLCGATRIIGVDVISEKFEIGKRFG 848
            K     I+ RAA+A AP +PL I E+ V+ P   EV +R   T +CH+D       D   VFP +LGHE                     IP + A+C EC  CRS K NLC +        +  D T+RF   +G+ I+H++  S+FSEY+V+    + K++P     + CLL CGV+TG+GA       +                 +      V +GAR   A RII +D    KFE+ K+FG
Sbjct:    4 KQINSTIKSRAAVAFAPNQPLQIVEIDVEMPRKGEVLIRNTHTGVCHTDAFTLSGSDPEGVFPVVLGHEGAGVVVAVGEGVLSVKPGDHVIPLYTAECGECEFCRSGKTNLCVSVRDTQGKGLMPDCTTRF-SYQGQPIYHYMGCSTFSEYSVVAEVSLAKINPEANHEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVFG--------LGAIGLAVVQGARQAKAGRIIAIDTNPAKFELAKQFG 240          
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: ADH1_GEOBU (Alcohol dehydrogenase 1 OS=Geomys bursarius GN=ADH1 PE=2 SV=3)

HSP 1 Score: 130.183 bits (326), Expect = 1.449e-29
Identity = 84/250 (33.60%), Postives = 114/250 (45.60%), Query Frame = 3
Query:  114 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRQQM*RXXXXXXXXXXXXXD*XFIDIFWD-----QVAKGARLCGATRIIGVDVISEKFEIGKRFG 848
            TAGK I+CRAA+     +P  I+EV V PP ++EVR++I+ T +C SD           + P ILGHEA                    IP F+  C +C  C+  + NLC       +     D TSRF   +G+ IHHF+ V++FSEYTV+    V K+D T P  + CL+ CG STG G+A +                          W          G +  GA RII VD+  +KF   K  G
Sbjct:    3 TAGKVIKCRAAVLWEKNKPFSIEEVEVAPPKAYEVRIKIVATGICRSDDHVVNGSIITPL-PAILGHEAGGIVESIGEGVTTVKPGDKVIPLFVPQCGKCRACKHPESNLCKHGDLGRAQGTLMDGTSRFT-CKGKPIHHFLGVTTFSEYTVVSEISVTKIDATSPLEKVCLIGCGFSTGYGSAVK-------------VGKVARGSICSCVWSGRVGLSAIIGCKAAGAARIIAVDINKDKFAKAKELG 237          
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: ADHI_RHOS4 (Alcohol dehydrogenase class-3 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=adhI PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.472e-29
Identity = 83/240 (34.58%), Postives = 113/240 (47.08%), Query Frame = 3
Query:  129 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRQQM*RXXXXXXXXXXXXXD*XFIDIFWDQVAKGARLCGATRIIGVDVISEKFEIGKRFG 848
            ++ RAA+A   G+PL I EV ++ P + EV V I  T +CH+D       D   +FP ILGHE                     IP +  +C +C  C S+K NLC+A        +  D TSRF  L G  I H++  S+FS YTVL    V KV P  P ++ C + CGV+TG+GA                         +      V +G +L GA  IIGVD+ + K E G+RFG
Sbjct:    1 MRTRAAVAVEAGKPLEIMEVNLEGPKAGEVMVEIKATGICHTDEFTLSGADPEGMFPAILGHEGAGVVVEVGPGVTSVKPGDHVIPLYTPECRQCPSCLSQKTNLCTAIRGTQGQGLMPDGTSRFSMLDGTPILHYMGCSTFSNYTVLPEIAVAKVRPDAPFDKICYIGCGVTTGIGAVINTAKVEIGAKAVVFG--------LGGIGLNVIQGLKLAGADMIIGVDLNNAKKEWGERFG 232          
The following BLAST results are available for this feature:
BLAST of EY660156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
FADH_CANMA2.920e-3034.27S-(hydroxymethyl)glutathione dehydrogenase OS=Cand... [more]
ADHP_RABIT2.920e-3034.94Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctol... [more]
ADH8_RANPE2.920e-3034.87NADP-dependent alcohol dehydrogenase OS=Rana perez... [more]
ADH1E_HORSE2.920e-3033.88Alcohol dehydrogenase E chain OS=Equus caballus PE... [more]
FADH_PICPA5.245e-3036.96S-(hydroxymethyl)glutathione dehydrogenase OS=Pich... [more]
ADH1S_HORSE6.506e-3034.94Alcohol dehydrogenase S chain OS=Equus caballus PE... [more]
ADH1_RAT1.110e-2933.74Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Ad... [more]
FRMA_HAEIN1.449e-2933.33S-(hydroxymethyl)glutathione dehydrogenase OS=Haem... [more]
ADH1_GEOBU1.449e-2933.60Alcohol dehydrogenase 1 OS=Geomys bursarius GN=ADH... [more]
ADHI_RHOS42.472e-2934.58Alcohol dehydrogenase class-3 OS=Rhodobacter sphae... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660156 ID=EY660156; Name=EY660156; organism=Citrus sinensis; type=EST; length=850bp
CCACGCGTCCGACTGCACCAGCCACCCTCTACTCACTCACTTTTCTTACA
GGAAAAAGCCAAAACAACTCTTAAACTATCTCCGGCATGGACATTGAGAA
ACCGTCGAATAAAACCGCCGGGAAACCAATTCAATGCAGAGCCGCAATCG
CTACAGCTCCAGGAGAGCCTCTGGTTATAGACGAGGTTATCGTCGACCCT
CCAAATTCCCACGAAGTTCGGGTTCGGATAATCTGTACTAGTCTCTGTCA
CAGTGACGTCACCTTCTGGAAAATGAAGGATTTTCCAGCCGTGTTTCCAA
GAATTCTCGGTCACGAGGCTATCGGAGTTGTGGAGAGTGTTGGGGAGAAT
GTAGATGGAGTGGTTGAAGGAGACGTTGTCATCCCGCACTTTCTGGCAGA
TTGTACAGAATGTGTAGGTTGTAGATCAAAGAAGGGCAACCTATGTTCAG
CATTTCCTTTCAAGATCTCTCCTTGGATGCCAAGGGATCAGACAAGCAGA
TTCAAAGACCTCAGAGGAGAGACTATACACCATTTTGTCTCTGTTTCAAG
TTTTTCTGAGTATACTGTTCTAGATATTGCCCATGTAGTCAAAGTTGATC
CTACAGTCCCTCCAAATAGGGCTTGCCTTCTAAGCTGTGGAGTATCAACA
GGCGTGGGAGCTGCTTGGAGACAGCAAATGTAGAGGTTGGGATCACTGTT
GNTATATTTGGGCTTGGNTCAATTGGATTAGCNGTTCATAGATATCTTTT
GGGATCAAGTTGCAAAGGGAGCGAGATTATGTGGTGCTACCAGGATTATA
GGCGTGGATGTGATCTCGGAAAAATTTGAAATTGGAAAAAGGTTTGGNAG
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