EY660156

Overview
NameEY660156
Unique NameEY660156
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: ADH1_RABIT (Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 2.472e-29
Identity = 82/245 (33.47%), Postives = 111/245 (45.31%), Query Frame = 3
Query:  114 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRQQM*RXXXXXXXXXXXXXD*XFIDIFWDQVAKGARLCGATRIIGVDVISEKFEIGKRFG 848
            TAGK I+C+AA+     +P  I+EV V PP +HEVR++++ T +C SD             P ILGHEA                    IP F   C +C  C+  + N C          M  D TSRF   +G+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG G+A +                             V  G +  GA+RII VD+  +KF   K  G
Sbjct:    3 TAGKVIKCKAAVLWQLNKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHAVTGSIAVPLPVILGHEAAGIVESIGEGVTTVKPGDKVIPLFTPQCGKCRICKHPESNFCLINDLGKPKGMLLDGTSRFT-CKGKPIHHFIGTSTFSQYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVG--------LSVIMGCKAAGASRIIAVDINKDKFPKAKEVG 237          
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: ADH1_PERMA (Alcohol dehydrogenase 1 OS=Peromyscus maniculatus GN=ADH1 PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 4.217e-29
Identity = 83/249 (33.33%), Postives = 116/249 (46.59%), Query Frame = 3
Query:  114 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR----DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRQQM*RXXXXXXXXXXXXXD*XFIDIFWDQVAKGARLCGATRIIGVDVISEKFEIGKRFG 848
            TAGK I+C+AA+   P +P  I+++ V PP +HEVR++++ T +C SD      +   +  P +LGHE                     IP F   C +C  C+  + NLC     K     PR    D TSRF   RG+ IH+F+S S+FS+YTV+D   V K+D   P  + CL+ CG STG G+A +                             V  G +  GA RII VD+  +KF   K  G
Sbjct:    3 TAGKVIKCKAAVLWEPHKPFSIEDIEVAPPKAHEVRIKMVATGVCRSD-DHVVSRSLASPLPAVLGHEGAGIVESVGEGVTSVKPGDKVIPLFTPQCGKCRICKHPEYNLC----MKNDLMQPRGTLLDGTSRFT-CRGKAIHNFISTSTFSQYTVVDEMAVAKIDGASPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVG--------LSVIIGCKAAGAARIIAVDINKDKFAKAKELG 237          
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: ADH1_GEOKN (Alcohol dehydrogenase 1 OS=Geomys knoxjonesi GN=ADH1 PE=2 SV=3)

HSP 1 Score: 128.257 bits (321), Expect = 5.508e-29
Identity = 83/250 (33.20%), Postives = 114/250 (45.60%), Query Frame = 3
Query:  114 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRQQM*RXXXXXXXXXXXXXD*XFIDIFWD-----QVAKGARLCGATRIIGVDVISEKFEIGKRFG 848
            TAGK I+CRAA+     +P  I+EV V PP ++EVR++I+ T +C SD           + P ILGHEA                    IP F+  C +C  C+  + NLC+      +     D TSRF   +G+ IHHF+ V++FSEYTV+    V K+D   P  + CL+ CG STG G+A +                          W          G +  GA RII VD+  +KF   K  G
Sbjct:    3 TAGKVIKCRAAVLWEKNKPFSIEEVEVVPPKAYEVRIKIVATGICRSDDHVVNGSIITPL-PAILGHEAGGIVESIGEGVTTVKPGDKVIPLFVPQCGKCRACKHPESNLCTHGDLGRAQGTLMDGTSRFT-CKGKPIHHFLGVTTFSEYTVVSEISVTKIDAASPLEKVCLIGCGFSTGYGSAVK-------------VGKVARGSICSCVWSGRVGLSAIIGCKAAGAARIIAVDINKDKFAKAKELG 237          
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: ADH1_GEOAT (Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH1 PE=2 SV=3)

HSP 1 Score: 128.257 bits (321), Expect = 5.508e-29
Identity = 83/245 (33.88%), Postives = 114/245 (46.53%), Query Frame = 3
Query:  114 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRQQM*RXXXXXXXXXXXXXD*XFIDIFWDQVAKGARLCGATRIIGVDVISEKFEIGKRFG 848
            TAGK I+CRAA+     +P  I+EV V PP ++EVR++I+ T +C SD           + P ILGHEA                    IP F+  C +C  C+  + NLC+      +     D TSRF   +G+ IHHF+ V++FSEYTV+    V K+D   P  + CL+ CG STG G+A +                      I         G +  GA RII VD+  +KF   K  G
Sbjct:    3 TAGKVIKCRAAVLWEKNKPFSIEEVEVAPPKAYEVRIKIVATGICRSDDHVVNGSIITPL-PAILGHEAGGIVESIGEGVTTVKPGDKVIPLFVPQCGKCRACKHPESNLCTHGDLGRAQGTLMDGTSRFT-CKGKPIHHFLGVTTFSEYTVVSEISVTKIDAASPLEKVCLIGCGFSTGYGSAVKVGKVARGSICACVWSGRVGLSAI--------IGCKAAGAARIIAVDINKDKFAKAKELG 237          
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: ADH1_MOUSE (Alcohol dehydrogenase 1 OS=Mus musculus GN=Adh1 PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 9.395e-29
Identity = 82/248 (33.06%), Postives = 117/248 (47.18%), Query Frame = 3
Query:  114 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSD---VTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRQQM*RXXXXXXXXXXXXXD*XFIDIFWDQVAKGARLCGATRIIGVDVISEKFEIGKRFG 848
            TAGK I+C+AA+     +P  I+++ V PP +HEVR++++ T +C SD   V+   +   PAV    LGHE                     IP F   C EC  C+  + N CS     +     R+ TSRF   +G+ IH+F+S S+FS+YTV+D   V K+D   P ++ CL+ CG STG G+A +                             V  G +  GA RII VD+  +KF   K  G
Sbjct:    3 TAGKVIKCKAAVLWELHKPFTIEDIEVAPPKAHEVRIKMVATGVCRSDDHVVSGTLVTPLPAV----LGHEGAGIVESVGEGVTCVKPGDKVIPLFSPQCGECRICKHPESNFCSRSDLLMPRGTLREGTSRFS-CKGKQIHNFISTSTFSQYTVVDDIAVAKIDGASPLDKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVG--------LSVIIGCKAAGAARIIAVDINKDKFAKAKELG 237          
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: FRMA_PASPI (S-(hydroxymethyl)glutathione dehydrogenase OS=Pasteurella piscicida GN=frmA PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.227e-28
Identity = 81/240 (33.75%), Postives = 113/240 (47.08%), Query Frame = 3
Query:  129 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRQQM*RXXXXXXXXXXXXXD*XFIDIFWDQVAKGARLCGATRIIGVDVISEKFEIGKRFG 848
            ++ RAA+A  PG PL I E+ V PP   EV V+I  T +CH+D       D   +FP +LGHE                     IP + A+C EC  C S K NLC A        +  D TSRF  + G+ ++H++  S+FSEYTV+    + K++P     + CLL CGV+TG+GA       +                 +      V +GAR   A RI  +D    KFE+ K+FG
Sbjct:    1 MKSRAAVAFGPGLPLEIVEIDVAPPKKGEVLVKISHTGVCHTDAYTLSGDDPEGLFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECDFCTSGKTNLCVAVRETQGKGVMPDATSRFF-VNGQPLYHYMGCSTFSEYTVVAEVSLAKINPQANAEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVFG--------LGGIGLAVVQGARQAKAGRIFAIDTNPSKFELAKQFG 231          
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: FRMA_SYNY3 (S-(hydroxymethyl)glutathione dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=frmA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.602e-28
Identity = 80/240 (33.33%), Postives = 114/240 (47.50%), Query Frame = 3
Query:  129 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRQQM*RXXXXXXXXXXXXXD*XFIDIFWDQVAKGARLCGATRIIGVDVISEKFEIGKRFG 848
            ++ RAA+A   G+PL I E+ V PP   EV V+I  T +CH+D       D   +FP +LGHE                     IP + A+C +C+ CRS K NLC A        +  D TSRF    G++++H++  S+FSEYTV+    + K++P       CLL CGV+TG+GA       +                 +      V +GAR   A RII +D    KFE+ K+ G
Sbjct:    1 MKSRAAVAFEVGKPLQIVEIDVAPPQQGEVLVKITHTGVCHTDAFTLSGDDPEGLFPVVLGHEGAGIVVEVGEGVTSVQLGDHVIPLYTAECGKCLFCRSGKTNLCVAVRATQGKGVMPDGTSRFS-YNGQSLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFG--------LGGIGLAVVQGARQAKAGRIIAIDTNPAKFELAKQMG 231          
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: FADH1_SCHPO (Probable S-(hydroxymethyl)glutathione dehydrogenase 1 OS=Schizosaccharomyces pombe GN=SPBC1539.07c PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 2.093e-28
Identity = 80/243 (32.92%), Postives = 113/243 (46.50%), Query Frame = 3
Query:  120 GKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRQQM*RXXXXXXXXXXXXXD*XFIDIFWDQVAKGARLCGATRIIGVDVISEKFEIGKRFG 848
            GK I C+AA+A    EPL I+++ V PP +HEVRV++  +++CH+D       D    FP +LGHE                     I  +  +C EC  CRS K NLCS         +  D TSRF   R +T+ H++  SSFS+YTV+    +V +  + P    CLL CGV+TG GA                                  +GA   GA+RII +D+ ++K    K+FG
Sbjct:    5 GKTITCKAAVAWGAKEPLSIEDIQVAPPKAHEVRVKVDWSAVCHTDAYTLSGVDPEGAFPIVLGHEGAGIVESIGEGVINVRPGDHVILLYTPECKECKFCRSGKTNLCSKIRETQGRGLMPDGTSRF-SCRDKTLLHYMGCSSFSQYTVVADISLVAISHSAPLRSICLLGCGVTTGFGAVTHSAKVESGSTVAVVGCGCVG--------LAAMQGAVAAGASRIIAIDINADKEVYAKKFG 238          
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: ADH1G_HUMAN (Alcohol dehydrogenase 1C OS=Homo sapiens GN=ADH1C PE=1 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.357e-27
Identity = 81/245 (33.06%), Postives = 110/245 (44.90%), Query Frame = 3
Query:  114 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRQQM*RXXXXXXXXXXXXXD*XFIDIFWDQVAKGARLCGATRIIGVDVISEKFEIGKRFG 848
            TAGK I+C+AA+     +P  I+EV V PP +HEVR++++   +C SD       +     P ILGHEA                    IP F   C +C  C++ + N C            +D T RF    G+ IHHFV VS+FS+YTV+D   V K+D   P  + CL+ CG STG G+A +                             V  G +  GA RII VD+  +KF   K  G
Sbjct:    3 TAGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVS-GNLVTPLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNPRGTLQDGTRRFT-CSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVG--------LSVVMGCKAAGAARIIAVDINKDKFAKAKELG 237          
BLAST of EY660156 vs. ExPASy Swiss-Prot
Match: ADH1B_PAPHA (Alcohol dehydrogenase 1B OS=Papio hamadryas GN=ADH1B PE=2 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.357e-27
Identity = 79/245 (32.24%), Postives = 110/245 (44.90%), Query Frame = 3
Query:  114 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRQQM*RXXXXXXXXXXXXXD*XFIDIFWDQVAKGARLCGATRIIGVDVISEKFEIGKRFG 848
            TAGK I+C+AA+     +P  I++V V PP ++EVR++++   +C +D       +  +  P ILGHEA                    IP F   C +C  C+S +GN C            +D T RF   RG+ IHHFV  S+FS+YTV+D   V K+D   P  + CL+ CG STG G+A                                  G +  GA RII VD+  +KF   K  G
Sbjct:    3 TAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTD-DHVVSGNLVSPLPAILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKSPEGNYCVKNDLSNPRGTLQDGTRRFT-CRGKPIHHFVGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSVCAVFGLGGVG--------LSAVMGCKAAGAARIIAVDINKDKFAKAKELG 237          
The following BLAST results are available for this feature:
BLAST of EY660156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
ADH1_RABIT2.472e-2933.47Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus G... [more]
ADH1_PERMA4.217e-2933.33Alcohol dehydrogenase 1 OS=Peromyscus maniculatus ... [more]
ADH1_GEOKN5.508e-2933.20Alcohol dehydrogenase 1 OS=Geomys knoxjonesi GN=AD... [more]
ADH1_GEOAT5.508e-2933.88Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH... [more]
ADH1_MOUSE9.395e-2933.06Alcohol dehydrogenase 1 OS=Mus musculus GN=Adh1 PE... [more]
FRMA_PASPI1.227e-2833.75S-(hydroxymethyl)glutathione dehydrogenase OS=Past... [more]
FRMA_SYNY31.602e-2833.33S-(hydroxymethyl)glutathione dehydrogenase OS=Syne... [more]
FADH1_SCHPO2.093e-2832.92Probable S-(hydroxymethyl)glutathione dehydrogenas... [more]
ADH1G_HUMAN1.357e-2733.06Alcohol dehydrogenase 1C OS=Homo sapiens GN=ADH1C ... [more]
ADH1B_PAPHA1.357e-2732.24Alcohol dehydrogenase 1B OS=Papio hamadryas GN=ADH... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660156 ID=EY660156; Name=EY660156; organism=Citrus sinensis; type=EST; length=850bp
CCACGCGTCCGACTGCACCAGCCACCCTCTACTCACTCACTTTTCTTACA
GGAAAAAGCCAAAACAACTCTTAAACTATCTCCGGCATGGACATTGAGAA
ACCGTCGAATAAAACCGCCGGGAAACCAATTCAATGCAGAGCCGCAATCG
CTACAGCTCCAGGAGAGCCTCTGGTTATAGACGAGGTTATCGTCGACCCT
CCAAATTCCCACGAAGTTCGGGTTCGGATAATCTGTACTAGTCTCTGTCA
CAGTGACGTCACCTTCTGGAAAATGAAGGATTTTCCAGCCGTGTTTCCAA
GAATTCTCGGTCACGAGGCTATCGGAGTTGTGGAGAGTGTTGGGGAGAAT
GTAGATGGAGTGGTTGAAGGAGACGTTGTCATCCCGCACTTTCTGGCAGA
TTGTACAGAATGTGTAGGTTGTAGATCAAAGAAGGGCAACCTATGTTCAG
CATTTCCTTTCAAGATCTCTCCTTGGATGCCAAGGGATCAGACAAGCAGA
TTCAAAGACCTCAGAGGAGAGACTATACACCATTTTGTCTCTGTTTCAAG
TTTTTCTGAGTATACTGTTCTAGATATTGCCCATGTAGTCAAAGTTGATC
CTACAGTCCCTCCAAATAGGGCTTGCCTTCTAAGCTGTGGAGTATCAACA
GGCGTGGGAGCTGCTTGGAGACAGCAAATGTAGAGGTTGGGATCACTGTT
GNTATATTTGGGCTTGGNTCAATTGGATTAGCNGTTCATAGATATCTTTT
GGGATCAAGTTGCAAAGGGAGCGAGATTATGTGGTGCTACCAGGATTATA
GGCGTGGATGTGATCTCGGAAAAATTTGAAATTGGAAAAAGGTTTGGNAG
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