EY660154

Overview
NameEY660154
Unique NameEY660154
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length933
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660154 vs. ExPASy Swiss-Prot
Match: TKT_MYCGE (Transketolase OS=Mycoplasma genitalium GN=tkt PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.268e-15
Identity = 50/150 (33.33%), Postives = 77/150 (51.33%), Query Frame = 1
Query:   52 DHYIYVILGDGCQMEGIANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHW 501
            DHY YV++GDG   EG++ E S +AG   L KLI  +D N + +D + +    EN+  RFE +GW+ I   + +   ++I  AI +AK  +DKPT I V TTI   + +  + Y  H       +     K     +  F+ P+ +  HW
Sbjct:  141 DHYTYVVVGDGDLQEGVSYEVSQIAGLYKLNKLIVLHDSNRVQMDSEVKKVANENLKVRFENVGWNYI---HTDDQLENIDQAIIKAKQ-SDKPTFIEVRTTIA-KNTHLEDQYGGHWFIPNEVDFQLFEKRTNTNFNFFNYPDSI-YHW 284          
BLAST of EY660154 vs. ExPASy Swiss-Prot
Match: TKT_MYCPN (Transketolase OS=Mycoplasma pneumoniae GN=tkt PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.614e-14
Identity = 51/154 (33.12%), Postives = 75/154 (48.70%), Query Frame = 1
Query:   52 DHYIYVILGDGCQMEGIANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHV 513
            DH+ YV++GDG   EG++ E + LAG   L KLI  +D N + +D        EN+  RF  +GW+ +     +    DI AAIK+AK  +DKPT I V TTI   +    +  + H      K+      N    + PF  P+ V   + + V
Sbjct:  141 DHFTYVVVGDGDLQEGVSYEVAHLAGVYQLNKLIVLHDSNRVQMDSVVRDVSLENLQTRFTNMGWNYL---ETSDAVADIDAAIKQAKK-SDKPTFIEVHTTIA-KNTTLEDQPAGHWFIPTDKDFARFNSNTKTNFTPFEYPQTVYDFFHKQV 289          
BLAST of EY660154 vs. ExPASy Swiss-Prot
Match: TKTN_METJA (Putative transketolase N-terminal section OS=Methanocaldococcus jannaschii GN=MJ0681 PE=5 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.410e-13
Identity = 46/135 (34.07%), Postives = 73/135 (54.07%), Query Frame = 1
Query:   52 DHYIYVILGDGCQMEGIANEASSLAGHLGLGKLIAFYDDNHISIDGDTE-IAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTD-KPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNL 450
            ++Y+YV+LGDG   EGI  EA+  A H  L  LIAF D N + IDG TE +    ++  +FE  GW V  +   N  +++I   +++AK++ + KP +I   T  G G     N+ + HG A   +++    + L
Sbjct:  140 NNYVYVLLGDGECQEGIVWEAAMAAAHYKLDNLIAFIDRNKLQIDGCTEDVMSLGDIKAKFEAFGWDVFEIDGHN--FEEIINTVEKAKSMKNGKPKMIIAYTVKGKGVSFMENNVAFHGKAPNEEQLKQALEEL 272          
The following BLAST results are available for this feature:
BLAST of EY660154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
TKT_MYCGE5.268e-1533.33Transketolase OS=Mycoplasma genitalium GN=tkt PE=3... [more]
TKT_MYCPN2.614e-1433.12Transketolase OS=Mycoplasma pneumoniae GN=tkt PE=1... [more]
TKTN_METJA8.410e-1334.07Putative transketolase N-terminal section OS=Metha... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-B05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660154 ID=EY660154; Name=EY660154; organism=Citrus sinensis; type=EST; length=933bp
ACTGGACGCCTGCGGTACCGGTCCGGATTCCTTTCGTCGACCCCGCGTCC
GGACCACTACATATATGTGATACTGGGAGATGGGTGCCAAATGGAGGGGA
TTGCAAATGAGGCTTCTTCCCTTGCTGGACACTTGGGACTTGGGAAGCTT
ATTGCTTTCTACGATGACAATCACATCTCTATTGATGGAGACACGGAGAT
TGCCTTTACGGAGAACGTTGACAAGCGTTTTGAAGGTCTTGGCTGGCATG
TTATCTGGGTGAAGAATGGAAACACTGGCTATGATGATATTCGTGCTGCT
ATTAAGGAAGCAAAGGCTGTCACAGATAAACCCACTTTGATTAGGGTGAC
TACAACCATTGGCTTTGGGTCTCCAAACAAAGCCAACAGCTACAGTGTAC
ATGGAAGTGCGCTGGGTGCCAAGGAAGTAGATGCTACTAGAAAGAATCTT
GGATGGCCATACGAGCCTTTCCATGTGCCAGAAGATGTTAAAAAGCACTG
GAGTCGCCATGTTGCTGAGGGCGCCGCTCTTGAAGCTGAGTGGAATGCCA
AGTTTGCTGAGTATGAGAAAAAATACCCTGAAGAAGCTGCAGAGTTTAAG
TCTATCAGCAGTGGTCAATTACCTGCTGGTTGAGAGAAAGCCCTTCCGAC
ATACAGTCCAGAGAGCCCAGCGGGAGCTACCAGAAATTATCTCAGACATG
TCTTAATGCCCTTGCAAAGACTCTCCCTGGTCTTCTTGGGGGGAGTGCAG
ACCTTGCTTCCTCCACATGACCCTACTAAAATGTTTGGGGGACTCCAAAG
GACACCCCAAAGAACGTAATGTCCGTTTTGTGGTAGGGACATGGGATGGA
ACCCTCTGAATGCATTTGCCTGCACACCCTGGCCTATTCCTAACGGGCGA
CTTTCTTGGTTTCCCCAATAATGGAACTGCTTA
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