EY660153

Overview
NameEY660153
Unique NameEY660153
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660153 vs. ExPASy Swiss-Prot
Match: UCRI_PROMM (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9313) GN=petC PE=3 SV=2)

HSP 1 Score: 238.424 bits (607), Expect = 4.211e-62
Identity = 108/176 (61.36%), Postives = 128/176 (72.73%), Query Frame = 2
Query:  155 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWW 682
            T + +  VP MG+RQ MNLL  G+V+      L P   +F PP    +GGGT+AKD +GN + A+ WL  H  GDR+L +GLKGDPTYL+VE D  + SYGINA+CTHLGCVVPWNS  NKF+CPCHGSQYN+ G+VVRGPAPLSLALA+  VEN  V    WTETDFRTGE PWW
Sbjct:    2 TQMTSSDVPGMGRRQFMNLLTFGSVTGVALGSLYPVVKYFIPPRASGSGGGTSAKDELGNSVTASGWLANHSDGDRSLVQGLKGDPTYLIVEGDDAIGSYGINAICTHLGCVVPWNSGVNKFVCPCHGSQYNSTGKVVRGPAPLSLALANIAVENDNVFVSQWTETDFRTGEKPWW 177          
BLAST of EY660153 vs. ExPASy Swiss-Prot
Match: UCRI_PROM3 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9303) GN=petC PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 4.211e-62
Identity = 108/176 (61.36%), Postives = 128/176 (72.73%), Query Frame = 2
Query:  155 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWW 682
            T + +  VP MG+RQ MNLL  G+V+      L P   +F PP    +GGGT+AKD +GN + A+ WL  H  GDR+L +GLKGDPTYL+VE D  + SYGINA+CTHLGCVVPWNS  NKF+CPCHGSQYN+ G+VVRGPAPLSLALA+  VEN  V    WTETDFRTGE PWW
Sbjct:    2 TQMTSSDVPGMGRRQFMNLLTFGSVTGVALGSLYPVVKYFIPPRASGSGGGTSAKDELGNSVTASGWLANHSDGDRSLVQGLKGDPTYLIVEGDDAIGSYGINAICTHLGCVVPWNSGVNKFVCPCHGSQYNSTGKVVRGPAPLSLALANIAVENDNVFVSQWTETDFRTGEKPWW 177          
BLAST of EY660153 vs. ExPASy Swiss-Prot
Match: UCRI_SYNPX (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain WH8102) GN=petC PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 7.184e-62
Identity = 109/177 (61.58%), Postives = 129/177 (72.88%), Query Frame = 2
Query:  155 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 685
            T + +  VP MG+RQ MNLL  G+V+      L P   +F PP    AGGGTTAKD +GN I A  WL++H  GDR+L +GLKGDPTYL+VE    + SYGINA+CTHLGCVVPWNS  NKF+CPCHGSQY+  G+VVRGPAPLSLALA+ +VEN  V    WTETDFRTG+ PWWA
Sbjct:    2 TQLSSSDVPGMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPRAAGAGGGTTAKDELGNAITATGWLSSHPEGDRSLVQGLKGDPTYLIVEGPDAIGSYGINAICTHLGCVVPWNSGANKFMCPCHGSQYDATGKVVRGPAPLSLALANVSVENDNVFVSQWTETDFRTGDKPWWA 178          
BLAST of EY660153 vs. ExPASy Swiss-Prot
Match: UCRI_THEEB (Cytochrome b6-f complex iron-sulfur subunit OS=Thermosynechococcus elongatus (strain BP-1) GN=petC PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 3.565e-61
Identity = 106/170 (62.35%), Postives = 130/170 (76.47%), Query Frame = 2
Query:  176 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANV-ENGKVVFVPWTETDFRTGEAPWW 682
            VPDMG+RQ MNLL  G ++      L P   +F PP  G  GGG  AKDA+GNDI  +++L  H PGDR+L +G+KGDPTY++V +D  +A+YG+NAVCTHLGCVVPWN +ENKFICPCHGSQY++ G+VVRGPAPLSLAL  A V E+ K+VF PWTE DFRTG+ PWW
Sbjct:   10 VPDMGRRQFMNLLTFGTITGTALGALYPVVKYFIPPASGGTGGGAVAKDALGNDIKVSEYLAKHLPGDRSLAQGIKGDPTYVIVTEDHQIANYGLNAVCTHLGCVVPWNVSENKFICPCHGSQYDSTGKVVRGPAPLSLALVKATVTEDDKLVFTPWTEIDFRTGKEPWW 179          
BLAST of EY660153 vs. ExPASy Swiss-Prot
Match: UCRI_SYNEL (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus elongatus GN=petC PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 3.565e-61
Identity = 106/170 (62.35%), Postives = 130/170 (76.47%), Query Frame = 2
Query:  176 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANV-ENGKVVFVPWTETDFRTGEAPWW 682
            VPDMG+RQ MNLL  G ++      L P   +F PP  G  GGG  AKDA+GNDI  +++L  H PGDR+L +G+KGDPTY++V +D  +A+YG+NAVCTHLGCVVPWN +ENKFICPCHGSQY++ G+VVRGPAPLSLAL  A V E+ K+VF PWTE DFRTG+ PWW
Sbjct:   10 VPDMGRRQFMNLLTFGTITGTALGALYPVVKYFIPPASGGTGGGAVAKDALGNDIKVSEYLAKHLPGDRSLAQGIKGDPTYVIVTEDHQIANYGLNAVCTHLGCVVPWNVSENKFICPCHGSQYDSTGKVVRGPAPLSLALVKATVTEDDKLVFTPWTEIDFRTGKEPWW 179          
BLAST of EY660153 vs. ExPASy Swiss-Prot
Match: UCRI_PROMT (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain NATL2A) GN=petC PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.355e-60
Identity = 104/176 (59.09%), Postives = 130/176 (73.86%), Query Frame = 2
Query:  155 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWW 682
            T +    VP MG+RQ MNLL  G V+      L P A +F P   G  GGGT AKD +GN++ A+ WL+TH  GDR+L +GLKGDPTYL+VE +  + SYGINA+CTHLGCVVPWNS  NK++CPCHGSQY++ G+VVRGPAPLSLA+AH ++E+ +V+   WTETDFRTG  PWW
Sbjct:    2 TQMTTADVPSMGRRQFMNLLTFGTVTGVALGALYPVAQYFTPYRAGGGGGGTNAKDELGNNVSASGWLSTHPVGDRSLVQGLKGDPTYLIVEGEDAITSYGINAICTHLGCVVPWNSGANKYMCPCHGSQYDSTGKVVRGPAPLSLAIAHVSIEDDQVLVSQWTETDFRTGTDPWW 177          
BLAST of EY660153 vs. ExPASy Swiss-Prot
Match: UCRI_PROM1 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain NATL1A) GN=petC PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.355e-60
Identity = 104/176 (59.09%), Postives = 130/176 (73.86%), Query Frame = 2
Query:  155 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWW 682
            T +    VP MG+RQ MNLL  G V+      L P A +F P   G  GGGT AKD +GN++ A+ WL+TH  GDR+L +GLKGDPTYL+VE +  + SYGINA+CTHLGCVVPWNS  NK++CPCHGSQY++ G+VVRGPAPLSLA+AH ++E+ +V+   WTETDFRTG  PWW
Sbjct:    2 TQMTTADVPSMGRRQFMNLLTFGTVTGVALGALYPVAQYFTPYRAGGGGGGTNAKDELGNNVSASGWLSTHPVGDRSLVQGLKGDPTYLIVEGEDAITSYGINAICTHLGCVVPWNSGANKYMCPCHGSQYDSTGKVVRGPAPLSLAIAHVSIEDDQVLVSQWTETDFRTGTDPWW 177          
BLAST of EY660153 vs. ExPASy Swiss-Prot
Match: UCRI_PROM4 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9211) GN=petC PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 6.724e-60
Identity = 106/173 (61.27%), Postives = 127/173 (73.41%), Query Frame = 2
Query:  164 PADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWW 682
            P+D VP MG+RQ MNLL  G  +      L P A +F P   G  GGGT+AKD +GN I A+ WL+ H  GDR+L +GLKGDPTYL+VE  + + ++GINA+CTHLGCVVPWNS  NK+ICPCHGSQY+  G+VVRGPAPLSLALAH +VE+ KV    W ETDFRTGE PWW
Sbjct:    6 PSD-VPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGNPITASGWLSNHPAGDRSLVQGLKGDPTYLIVEGSEAIGNFGINAICTHLGCVVPWNSGANKYICPCHGSQYDANGKVVRGPAPLSLALAHIDVEDDKVFVSQWAETDFRTGEKPWW 177          
BLAST of EY660153 vs. ExPASy Swiss-Prot
Match: UCRI_PROMA (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus GN=petC PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 5.692e-59
Identity = 103/174 (59.20%), Postives = 126/174 (72.41%), Query Frame = 2
Query:  164 PADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 685
            P+D VP MG+RQ MNLL  G  +      L P A FF P   G   GGTTAKD +GN + A  WL+ H  GDR+L +GLKGDPTYL+V+ D  + ++GINA+CTHLGCVVPWNS  NK+ICPCHGSQY+  G+VVRGPAPLSLAL H ++++  V+   WTETDFRTG+ PWWA
Sbjct:    6 PSD-VPSMGRRQFMNLLTFGTATGVALGALYPVANFFMPLRAGGGTGGTTAKDELGNAVTATGWLSNHPAGDRSLVQGLKGDPTYLIVDGDAAIGNFGINAICTHLGCVVPWNSGANKYICPCHGSQYDANGKVVRGPAPLSLALTHIDIDDDNVLVSQWTETDFRTGDKPWWA 178          
BLAST of EY660153 vs. ExPASy Swiss-Prot
Match: UCRI_PROMS (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain AS9601) GN=petC PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.819e-58
Identity = 101/177 (57.06%), Postives = 125/177 (70.62%), Query Frame = 2
Query:  155 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 685
            T + ++ VP MG+RQ MNLL  G  +      L P A +F P   G  GGGT+AKD +GN I    WL TH  GDR+L +GLKGDPTYL+V +   +  +G+NA+CTHLGCVVPW+S  NKFICPCHGSQY+  G+VVRGPAPLSLALAH ++E+  V+   W+ETDFRT E PWWA
Sbjct:    2 TQLSSNDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGNPITKTGWLATHQAGDRSLVQGLKGDPTYLIVNEGGEIGEFGLNAICTHLGCVVPWDSGANKFICPCHGSQYDTNGKVVRGPAPLSLALAHVDIEDDAVLVKQWSETDFRTNENPWWA 178          
The following BLAST results are available for this feature:
BLAST of EY660153 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
UCRI_PROMM4.211e-6261.36Cytochrome b6-f complex iron-sulfur subunit OS=Pro... [more]
UCRI_PROM34.211e-6261.36Cytochrome b6-f complex iron-sulfur subunit OS=Pro... [more]
UCRI_SYNPX7.184e-6261.58Cytochrome b6-f complex iron-sulfur subunit OS=Syn... [more]
UCRI_THEEB3.565e-6162.35Cytochrome b6-f complex iron-sulfur subunit OS=The... [more]
UCRI_SYNEL3.565e-6162.35Cytochrome b6-f complex iron-sulfur subunit OS=Syn... [more]
UCRI_PROMT1.355e-6059.09Cytochrome b6-f complex iron-sulfur subunit OS=Pro... [more]
UCRI_PROM11.355e-6059.09Cytochrome b6-f complex iron-sulfur subunit OS=Pro... [more]
UCRI_PROM46.724e-6061.27Cytochrome b6-f complex iron-sulfur subunit OS=Pro... [more]
UCRI_PROMA5.692e-5959.20Cytochrome b6-f complex iron-sulfur subunit OS=Pro... [more]
UCRI_PROMS4.819e-5857.06Cytochrome b6-f complex iron-sulfur subunit OS=Pro... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660153 ID=EY660153; Name=EY660153; organism=Citrus sinensis; type=EST; length=905bp
CCACGCGTCCGCTTCTCTCTCCTCAGCAACTCCTTCTCAGCTATGCTCAA
GCAAGGGTGGTATGTTCTGTCCATCAAGAGCTTTTCTTGTGAAACCAGCA
AGGACCCAGATGGTGACAAAGAATCCAATGGGAATGAAGATCAAGTGCCA
GGCTACAAGTATTCCAGCTGATAGAGTGCCTGATATGGGCAAGAGGCAGC
TCATGAATTTGCTTCTCTTGGGTGCTGTTTCTCTTCCCACTGGATTTATG
TTGGTTCCTTATGCGACCTTCTTTGCCCCACCTGGTTTAGGAAGTGCTGG
TGGTGGTACTACTGCCAAGGATGCCATTGGCAATGACATCATTGCCGCTG
ATTGGCTTAACACGCACGGCCCTGGGGACCGAACCCTCACCGAAGGATTG
AAGGGAGATCCAACCTACCTTGTTGTGGAAAAAGACAAAACACTTGCATC
ATATGGAATCAATGCTGTCTGCACTCACCTTGGATGTGTGGTGCCATGGA
ATTCAGCTGAGAACAAGTTCATCTGTCCCTGCCACGGATCCCAATACAAT
AACCAAGGAAGAGTTGTGAGAGGGCCTGCTCCATTGTCATTGGCATTGGC
TCATGCCAACGTTGAAAATGGTAAGGTAGTCTTCGTTCCATGGACGGAAA
CAGATTTCAGAACTGGTGAAGCTCCATGGTGGGCTTAAACTTGTTCCGGT
GCCTGTGCTTTCAATAATCAAGTTTTTGGCCGGCCGGTTGCTTTTGCGTA
CTGCATAACATACTGAAACGAACATGCTTTATCAGAATGGAGCTCCCACA
TGTAAAGCTACTTTGGCTGAATCTGCTATCTTGCAATCTTTGGAATCTGA
AAATTTTCCTTATCACTCATTCTTGGATCCTAAAAATCTACCCTCAACAA
TGGAT
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