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Overview
Name | EY660151 |
Unique Name | EY660151 |
Type | EST |
Organism | Citrus sinensis (Sweet orange) |
Sequence length | 481 |
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660151 vs. ExPASy Swiss-Prot
Match: S5A2_RAT (3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Rattus norvegicus GN=Srd5a2 PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.325e-11 Identity = 36/112 (32.14%), Postives = 63/112 (56.25%), Query Frame = 1 Query: 64 DLKF-LGMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYATRAWYLSKFEDFPKHVNSIFPYIF 396
D++F G+ LF+LG+ N + L ++R+ GE Y+IP GLF V ++L EI+ + G ++ AF +A +L +++ +YL F+D+PK ++ P+IF
Sbjct: 143 DVRFSFGVFLFILGMGINIHSDYTLRQLRKPGEVIYRIPRGGLFTYVSGANFLGEIIEWIGYALATWSVPAFAFAFFTLCFLGMQAFYHHRFYLKMFKDYPKSRKALIPFIF 254
The following BLAST results are available for this feature:
BLAST of EY660151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 ( BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match Name | E-value | Identity | Description | |
S5A2_RAT | 8.325e-11 | 32.14 | 3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Rattus ... | [more] |
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Properties
Property Name | Value |
Genbank description | CS00-C1-101-019-B02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence. |
Sequences
The
following sequences are available for this feature:
EST sequence >EY660151 ID=EY660151; Name=EY660151; organism=Citrus sinensis; type=EST; length=481bp CCACGCGTCCGCACCGCAGCAATGATATATGTTCAAAGTGAAGGATTAGG AGAGCCAACTATTGATTTGAAGTTTTTGGGGATGATTCTATTTTTGTTGG GAATAAGCGGCAATTTCTACCACCACAATCTGCTTTCAAAAATGAGAAGA AACGGTGAAAAAGAATACAAGATTCCCACGAGTGGTTTATTTGATAAAGT TGTATGCCCCCATTACTTGTTTGAGATATTAGGGTTTTGGGGCATCTTTT TCATTGCTCAAACTCTGTATGCATTTTGCTATGCTATAGGTGTAACTTTT TACTTAATGGGAAGAAGCTATGCAACTAGGGCATGGTATCTTTCCAAATT TGAAGACTTCCCCAAACATGTCAACTCCATTTTTCCATATATTTTTTAGA AAGGAAAGAAATTAATTCCAATAAAAATTGAATTTTTCTGAGTTGCAAAA AANNNNNGNNNNNNNAAAAAAACAAAAAAAA back to top
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