EY660151

Overview
NameEY660151
Unique NameEY660151
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length481
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY660151 vs. ExPASy Swiss-Prot
Match: S5A2_RAT (3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Rattus norvegicus GN=Srd5a2 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.325e-11
Identity = 36/112 (32.14%), Postives = 63/112 (56.25%), Query Frame = 1 
Query:   64 DLKF-LGMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYATRAWYLSKFEDFPKHVNSIFPYIF 396
            D++F  G+ LF+LG+  N +    L ++R+ GE  Y+IP  GLF  V   ++L EI+ + G      ++ AF +A     +L  +++    +YL  F+D+PK   ++ P+IF
Sbjct:  143 DVRFSFGVFLFILGMGINIHSDYTLRQLRKPGEVIYRIPRGGLFTYVSGANFLGEIIEWIGYALATWSVPAFAFAFFTLCFLGMQAFYHHRFYLKMFKDYPKSRKALIPFIF 254
The following BLAST results are available for this feature:
BLAST of EY660151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
S5A2_RAT8.325e-1132.143-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Rattus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-B02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660151 ID=EY660151; Name=EY660151; organism=Citrus sinensis; type=EST; length=481bp
CCACGCGTCCGCACCGCAGCAATGATATATGTTCAAAGTGAAGGATTAGG
AGAGCCAACTATTGATTTGAAGTTTTTGGGGATGATTCTATTTTTGTTGG
GAATAAGCGGCAATTTCTACCACCACAATCTGCTTTCAAAAATGAGAAGA
AACGGTGAAAAAGAATACAAGATTCCCACGAGTGGTTTATTTGATAAAGT
TGTATGCCCCCATTACTTGTTTGAGATATTAGGGTTTTGGGGCATCTTTT
TCATTGCTCAAACTCTGTATGCATTTTGCTATGCTATAGGTGTAACTTTT
TACTTAATGGGAAGAAGCTATGCAACTAGGGCATGGTATCTTTCCAAATT
TGAAGACTTCCCCAAACATGTCAACTCCATTTTTCCATATATTTTTTAGA
AAGGAAAGAAATTAATTCCAATAAAAATTGAATTTTTCTGAGTTGCAAAA
AANNNNNGNNNNNNNAAAAAAACAAAAAAAA
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