EY660135
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660135 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.183e-48 Identity = 102/200 (51.00%), Postives = 137/200 (68.50%), Query Frame = 2 Query: 185 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDSFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAN 769 WYG DR ++L G S P YL+GE PGDYG+D+ GLS P+ F+K + E+IH+RWAMLGA G + PE K G G EAVWFK G+ + L+Y G ++ + A+ A +++L+G E YR+ G ++ED ++PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+M GFF+QA VTG+GP+ENL++ Sbjct: 49 WYGSDRPLYL--GPFSGSP-PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFG-EAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSD 244
BLAST of EY660135 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.183e-48 Identity = 101/200 (50.50%), Postives = 136/200 (68.00%), Query Frame = 2 Query: 185 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDSFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAN 769 WYGPDR +L E P YLTGE PGDYG+D+ GLS P+ F+K + E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G ++ + ++ A +++L+G E YR+ G ++ D L+PGG FDPLGLA+DP++ A LKVKE+KNGRLAMF+M GFF+QA VTG+GP+ENLA+ Sbjct: 48 WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLAEDPERSAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 243
BLAST of EY660135 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.183e-48 Identity = 104/200 (52.00%), Postives = 133/200 (66.50%), Query Frame = 2 Query: 185 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDSFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAN 769 WYGPDR +L E P YLTGE PGDYG+D+ GLS P F+K + E+IH RW MLGA G + PE F + G G EAVWFK G+ + L+Y G ++ + A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA L+VKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA+ Sbjct: 50 WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFG-EAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 245
BLAST of EY660135 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 2.018e-48 Identity = 103/200 (51.50%), Postives = 133/200 (66.50%), Query Frame = 2 Query: 185 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDSFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAN 769 WYGPDR +L E P YLTGE PGDYG+D+ GLS P+ F+K + E+IH RWAMLGA G + PE F + G G EAVW K G+ + L+Y G ++ + A+ A +++L+G E YR+ G + D L+PGG FDPLGLA+DP+ FA LKVKE KNGRLAMF+M GFF+QA VTG+GP+ENLA+ Sbjct: 51 WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFG-EAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAGGPLGVVVDPLYPGGSFDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLAD 246
BLAST of EY660135 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 2.018e-48 Identity = 105/200 (52.50%), Postives = 134/200 (67.00%), Query Frame = 2 Query: 185 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDSFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAN 769 WYGPDR ++L G L E P YLTGE PGDYG+D+ GLS P+ F+K + E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I+ + A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ F LKVKE+K GRLAM +M GFF+QA VTG+GP+ENLA+ Sbjct: 49 WYGPDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKGPLENLAD 244
BLAST of EY660135 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 2.636e-48 Identity = 104/200 (52.00%), Postives = 132/200 (66.00%), Query Frame = 2 Query: 185 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDSFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAN 769 WYGPDR +L E P YLTGE PGDYG+D+ GLS P+ F+K + E+IH RWAMLGA G + PE + G G EAVWFK G+ + L Y G ++ + A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA D + FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA+ Sbjct: 48 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFG-EAVWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDAEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 243
BLAST of EY660135 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 2.636e-48 Identity = 103/200 (51.50%), Postives = 133/200 (66.50%), Query Frame = 2 Query: 185 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDSFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAN 769 WYGPDR +L E P YLTGE PGDYG+D+ GLS P+ F+K + E+IH+RWAMLGA G + PE + G G EA WFK G+ + L+Y G I+ + A+ A +++L+G E YRI G ++ D ++PGG FDPL LA DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA+ Sbjct: 29 WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLALADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 224
BLAST of EY660135 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 2.636e-48 Identity = 105/198 (53.03%), Postives = 131/198 (66.16%), Query Frame = 2 Query: 185 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDSFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENL 763 WYGPDR +L +IP YLTGE PGDYG+D+ GLS P+ F++ + E+IH+RWAMLGA G PE K G G EAVWFK G+ + L+Y G I + A+ A ++VL+G E YR+ G E D L+PGG FDPLGLA DPD FA LKVKE+KNGRLAMF+M GFF+QA VTG+GP++NL Sbjct: 49 WYGPDRPKYLGPF---SEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFG-EAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNL 242
BLAST of EY660135 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 3.442e-48 Identity = 104/198 (52.53%), Postives = 130/198 (65.66%), Query Frame = 2 Query: 185 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDSFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENL 763 WYG DR FL E P YL GE GDYG+D+ GLS P+ F++ + E+IHARWAMLGA G + PE K G G EAVWFK GA + L+Y G ++ + A+ A ++VL+G E YR+ G ++ D ++PGG FDPLGLA DPD FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENL Sbjct: 52 WYGADRPKFLGPF---SGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 245
BLAST of EY660135 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 3.442e-48 Identity = 104/198 (52.53%), Postives = 131/198 (66.16%), Query Frame = 2 Query: 185 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDSFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAV-IAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENL 763 WYG DR +L + P YLTGE PGDYG+D+ GLS P+ F++ + E+IH RWAMLGA G + PE +K G G EAVWFK G+ + L+Y G I + A+ A++VL+G E YR+ G E DK++PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENL Sbjct: 49 WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL 242 The following BLAST results are available for this feature:
BLAST of EY660135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660135 ID=EY660135; Name=EY660135; organism=Citrus sinensis; type=EST; length=903bpback to top |