EY660135
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY660135 vs. ExPASy Swiss-Prot
Match: CB2E_SOLLC (Chlorophyll a-b binding protein 3A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3A PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.538e-23 Identity = 53/81 (65.43%), Postives = 66/81 (81.48%), Query Frame = 2 Query: 533 EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAN 769 ++VL+G E YRI G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA+ Sbjct: 166 QVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 246
BLAST of EY660135 vs. ExPASy Swiss-Prot
Match: CB2D_SOLLC (Chlorophyll a-b binding protein 1D (Fragment) OS=Solanum lycopersicum GN=CAB1D PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.538e-23 Identity = 53/81 (65.43%), Postives = 66/81 (81.48%), Query Frame = 2 Query: 533 EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAN 769 ++VL+G E YRI G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA+ Sbjct: 15 QVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 95
BLAST of EY660135 vs. ExPASy Swiss-Prot
Match: CB2C_SOLLC (Chlorophyll a-b binding protein 1C, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1C PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.538e-23 Identity = 53/81 (65.43%), Postives = 66/81 (81.48%), Query Frame = 2 Query: 533 EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAN 769 ++VL+G E YRI G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA+ Sbjct: 164 QVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 244
BLAST of EY660135 vs. ExPASy Swiss-Prot
Match: CB2A_SOLLC (Chlorophyll a-b binding protein 1A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1A PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.538e-23 Identity = 53/81 (65.43%), Postives = 66/81 (81.48%), Query Frame = 2 Query: 533 EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAN 769 ++VL+G E YRI G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA+ Sbjct: 164 QVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 244
BLAST of EY660135 vs. ExPASy Swiss-Prot
Match: CB4A_ARATH (Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.902e-22 Identity = 72/219 (32.88%), Postives = 105/219 (47.95%), Query Frame = 2 Query: 245 PEYLTGEVPGDYGYDSFGLSKKPD-------------------------------------------DFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPF-DPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLA 766 P++L G + GDYG+D FGL K + +++ ELIH RWAML G + E W G + L+DG++ Y G+ +P ++ + E++++G E+ R LD E +L+PGG F DPLGLA DP++ A L++ EIK+ RLAM A LGF +QA TG+GP+ N A Sbjct: 65 PDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTG--------VTWQDAGKVELVDGSS--YLGQPLPFSISTLIWIEVLVIGYIEFQRNAE-LDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWA 272
BLAST of EY660135 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.484e-22 Identity = 70/186 (37.63%), Postives = 98/186 (52.69%), Query Frame = 2 Query: 245 PEYLTGEVPGDYGYDSFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITN-GLDLEDKL------------HPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENL 763 P+YLTG + GD G+D GL++ P++ + EL++ RWAMLG AG ++PE F K G PE W+ D YF + + ++ ++ V + + I N G +D + +PGG F+PL A P Q A K KE+ NGRLAM A LGF +Q VTG+GP ENL Sbjct: 64 PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPE--WY-------DAGKEQYFASSSTLFVIEFILFHYVEI--RRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGIFNPLNFA--PTQEA--KEKELANGRLAMLAFLGFVVQHNVTGKGPFENL 234
BLAST of EY660135 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.103e-21 Identity = 65/186 (34.95%), Postives = 94/186 (50.54%), Query Frame = 2 Query: 245 PEYLTGEVPGDYGYDSFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITN-------------GLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENL 763 P YLTG +PGD G+D GL++ P++ + EL++ RWAMLG AG ++PE F G P+ W+ G YF + + ++ +++ V + + I N L + +PGG F+PL A + K KEI NGRLAM A LGF +Q VTG+GP +NL Sbjct: 63 PGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPK--WYAAG-------KEEYFASSSTLFVIEFILSHYVEI--RRWQDIKNPGSVNQDPIFKQYSLPAGEVGYPGGIFNPLNFAPTLE----AKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNL 233
BLAST of EY660135 vs. ExPASy Swiss-Prot
Match: CB21_EUGGR (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.103e-21 Identity = 55/90 (61.11%), Postives = 65/90 (72.22%), Query Frame = 2 Query: 509 NLVFAVIAEIVLVGGAEYYRITN------GLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVEN 760 +L+ + +++L+G E YR N G DL D+L+PGGPFDPLGLA DPD F LKVKEIKNGRLAM MLGF+ QA VTGEGPVEN Sbjct: 10 SLLAILATQVLLMGAVEGYRAGNTAPGQFGEDL-DRLYPGGPFDPLGLADDPDTFPELKVKEIKNGRLAMSGMLGFYAQAIVTGEGPVEN 98
BLAST of EY660135 vs. ExPASy Swiss-Prot
Match: CB21_RAPSA (Chlorophyll a-b binding of LHCII type 1 protein (Fragment) OS=Raphanus sativus PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 5.180e-20 Identity = 49/82 (59.76%), Postives = 61/82 (74.39%), Query Frame = 2 Query: 533 EIVLVGGAEYYRITNGLDL---EDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAN 769 +++L+G E YR+ L ED L+PGG FDPL DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA+ Sbjct: 22 QVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLASLTDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 103
BLAST of EY660135 vs. ExPASy Swiss-Prot
Match: LH18_EUGGR (Light-harvesting complex I LH38 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 9.144e-17 Identity = 63/178 (35.39%), Postives = 86/178 (48.31%), Query Frame = 2 Query: 245 PEYLTGEVPGDYGYDSFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYR-----ITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENL 763 P YLTGE GD G+D GL+ P F + Q E+ H R +ML G ++PE WF+ + D N FAV+A + +V EY+R + N + D+ +PG FDPL L + K EIKNGRLAM M G +Q++VTG+ P+ NL Sbjct: 381 PRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELLG--------NGAWFQ----IWDKVDFNR----------FAVVA-LQVVAPLEYWRGNGGFLWNDEETVDQSYPG--FDPLNLTTE-----YTKEAEIKNGRLAMNGMFGLEVQSHVTGKSPINNL 528 HSP 2 Score: 86.6557 bits (213), Expect = 2.037e-16 Identity = 59/181 (32.60%), Postives = 84/181 (46.41%), Query Frame = 2 Query: 236 SEIPEYLTGEVPGDYGYDSFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNGLDLE----DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLA 766 +E P LTGE P D G+D L+ PD +++ + E+ H R AML G I+PE K WF+ G +DG L + + + EY+R G + + D+ +PG FDPL L D + E+KNGRLA+ A+ G Q TGE P+ NL+ Sbjct: 194 AEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELLGK--------GAWFEAGD-SVDGLKLGFI--------------TMAIAAPTEYWRGQGGFNWQKGELDRSYPG--FDPLNLTTD-----YTRAAEVKNGRLALTAVAGLTAQYLATGESPLANLS 344 The following BLAST results are available for this feature:
BLAST of EY660135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660135 ID=EY660135; Name=EY660135; organism=Citrus sinensis; type=EST; length=903bpback to top |