EY660125

Overview
NameEY660125
Unique NameEY660125
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length912
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660125 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.420e-11
Identity = 63/212 (29.72%), Postives = 93/212 (43.87%), Query Frame = 3
Query:  183 PFAQRAWITRNYKGL------QDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHNGKVIGESLDLIKYVDSNFEGPSPLPDDPEKRKIADELFSHIDTFTNDVYTSF--KGDPAKQAGPAFDYLEKALD-KFDDGPFFLG-QFSQVDIAYIPFVERFQIFLSEEFKYDITAGR---PKLAAWIEELNKLDAYKSTKADPKQLVEFYRSRFVA 779
            PF+ R       KG+      +D+     L LQ  P +         KVP L HNGK I ES+ +++Y+D  FEGPS LP DP  R +A      +D     V  +F  KG+  ++       + K LD +  D  FF G +F   DIA    +  F + + EE   D+       P  + W +E         +     +L+ F+R+RF A
Sbjct:   13 PFSHRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPVY--------KKVPVLIHNGKPIVESMIILEYIDETFEGPSILPKDPYDRALARFWAKFLDDKVAAVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFAGDKFGFADIA--ANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLPPRDELLAFFRARFQA 214          
BLAST of EY660125 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.951e-11
Identity = 64/222 (28.83%), Postives = 95/222 (42.79%), Query Frame = 3
Query:  183 PFAQRAWITRNYKGL------QDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHNGKVIGESLDLIKYVDSNFEGPSPLPDDPEKRKIA--------DELFSHIDTFTNDVYTSFKGDPAKQAGPAFDYLEKALD-KFDDGPFFLG-QFSQVDIA-------YIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYRSRFVA 779
            PF  R       KG+      +D+     L LQ  P           KVP L HNGK I ES+ +++Y+D  FEGPS LP DP  R +A        D++ + ++TF        KG+  ++       + K LD +  D  FF+G +F   DIA          F E + + L    K+      P  + W +E       K +     +L+ F+R+RF A
Sbjct:   13 PFTHRVEWALKLKGVKYEYIEEDRDNKSSLLLQSNPVH--------KKVPVLIHNGKPIVESMVILEYIDETFEGPSILPKDPYDRALARFWSKFLGDKVAAVVNTFFR------KGEEQEKGKEEVYEMLKVLDNELKDKKFFVGDKFGFADIAANLVGFWLGVFEEGYGVVLVTSEKF------PNFSRWRDEYINCSQVKESLPSRDELLAFFRARFQA 214          
The following BLAST results are available for this feature:
BLAST of EY660125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
GSTX2_TOBAC3.420e-1129.72Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX3_TOBAC9.951e-1128.83Probable glutathione S-transferase OS=Nicotiana ta... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-018-G10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660125 ID=EY660125; Name=EY660125; organism=Citrus sinensis; type=EST; length=912bp
CCACGCGTCCGCAGATAACTTTCTTCTTCAAGCAAAAGAAAAGCATTCAG
GAAACCTCTAGAGTCTTACCTTCCTCAATGGCCACCACAGCGCAAGAGAA
TCTTCCTCCACCGTTGGATTCGAAGGCCGAGCTACCACCTCTGTTCGATG
GAACTCCCAGGTTGTACATTTCTTACTCGTGCCCATTTGCTCAGCGTGCG
TGGATCACCAGGAACTACAAGGGATTACAAGACAAGATTAAGTTAGTTCC
ACTGAACCTCCAAGATAGGCCCGCTTGGTACAAGGAGAAGGTTTATCCTG
CTAACAAGGTTCCAGCACTGGAGCACAATGGCAAAGTTATTGGAGAATCT
CTTGATTTGATTAAATATGTTGACAGCAATTTTGAAGGGCCTTCACCTTT
ACCTGATGATCCTGAGAAACGAAAGATTGCTGATGAACTGTTTTCCCACA
TCGATACCTTCACCAACGATGTGTATACTTCATTCAAAGGAGACCCAGCA
AAACAAGCTGGTCCTGCTTTTGATTACTTAGAGAAGGCCCTTGATAAATT
TGATGATGGCCCGTTCTTCCTTGGACAGTTCAGTCAGGTGGACATAGCCT
ATATTCCATTTGTTGAGAGATTCCAGATCTTCTTATCAGAAGAATTTAAG
TATGACATCACTGCAGGCAGGCCTAAACTGGCAGCATGGATTGAGGAGTT
GAACAAGCTCGATGCTTACAAGTCAACAAAAGCAGATCCAAAACAACTCG
TTGAATTTTACAGGAGCCGCTTCGTGGCCAAGCAGTGAACCTGCAATCAG
TCGTCTTAGAAGCGCACTGAATCAGTTGGTGGCGTGGTTTGTGAAAATCT
CGTATATAAGCTGCGCNGTATCACATTACATATTGTTTGCCGATGTGAGC
TTGTGTACGTTG
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