EY660118

Overview
NameEY660118
Unique NameEY660118
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660118 vs. ExPASy Swiss-Prot
Match: P2C09_ORYSJ (Probable protein phosphatase 2C 9 OS=Oryza sativa subsp. japonica GN=Os01g0846300 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.641e-16
Identity = 64/196 (32.65%), Postives = 96/196 (48.98%), Query Frame = 2
Query:  122 RYGLSSMQGWRATMEDAHAAYPDLDSSTS---FFGVYDGHGGKAVAKFCAKYLHQQVLK-HEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDP*PDLEXEKDRFLKAGG 697
            RYG++++ G R  MEDA +  PD   ++    F+GV+DGHG   VA  C   +H+ V + H   ++G++                    WR      D M+K    ++G + +     ++D       ++ P    H   +GSTA VA++   Q+VVANAGDSR V+SR G  + LS D  PD   E +R   AGG
Sbjct:   99 RYGVTAVCGRRREMEDAVSIRPDFLPASGKFHFYGVFDGHGCSHVATTCQDRMHEIVAEEHNKGASGEVAP------------------WR------DVMEKSFARMDGEVGNRASTRSDDEPACPCEQQTPSRRDH---AGSTAVVAVVSPTQVVVANAGDSRAVISRAGVPVALSVDHKPDRPDELERIEAAGG 267          
BLAST of EY660118 vs. ExPASy Swiss-Prot
Match: P2C16_ARATH (Protein phosphatase 2C 16 OS=Arabidopsis thaliana GN=HAB1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.273e-13
Identity = 65/211 (30.81%), Postives = 88/211 (41.71%), Query Frame = 2
Query:  125 YGLSSMQGWRATMEDAHAAYPDL--------------------DSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDP*PDLEXEKDRFLKAGG 697
            +G  S+QG R+ MEDA A  P                        +  FFGVYDGHGG  VA +C   LH        ++  + +   +    + +     Q  W +  +         G IEG I     G ++   +   SE          T GSTA VA++    +VV+N GDSR VL R  +A+ LS D  PD E E  R   AGG
Sbjct:  190 WGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLH--------FALAEEIERIKDELCKRNTGEGRQVQWDK--VFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASE----------TVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGG 380          
BLAST of EY660118 vs. ExPASy Swiss-Prot
Match: P2C07_ARATH (Protein phosphatase 2C 7 OS=Arabidopsis thaliana GN=HAB2 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.193e-13
Identity = 66/211 (31.28%), Postives = 92/211 (43.60%), Query Frame = 2
Query:  125 YGLSSMQGWRATMEDAHAAYP-------------------DLDSSTS-FFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDP*PDLEXEKDRFLKAGG 697
            +G  S+ G R+ MEDA  A P                    L   TS FFGVYDGHGG  VA +C   +H  + +         +   ++   R +     Q  W ++ +  D   K    ++G I  P  G ++    +  S E         T GSTA VA++    ++V+N GDSR VL R   ++ LS D  PD E E  R  KAGG
Sbjct:  189 WGTISICGGRSEMEDAVRALPHFLKIPIKMLMGDHEGMSPSLPYLTSHFFGVYDGHGGAQVADYCHDRIHSALAEE--------IERIKEELCRRNTGEGRQVQWEKVFV--DCYLKVDDEVKGKINRPVVGSSDRMVLEAVSPE---------TVGSTAVVALVCSSHIIVSNCGDSRAVLLRGKDSMPLSVDHKPDREDEYARIEKAGG 380          
BLAST of EY660118 vs. ExPASy Swiss-Prot
Match: P2C68_ORYSJ (Probable protein phosphatase 2C 68 OS=Oryza sativa subsp. japonica GN=Os09g0325700 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.070e-12
Identity = 62/201 (30.85%), Postives = 87/201 (43.28%), Query Frame = 2
Query:  122 RYGLSSMQGWRATMEDAHAAYPDLDSSTS---------FFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDP*PDLEXEKDRFLKAGG 697
            R+G +S+ G R  MEDA +      +  +         F+GV+DGHG   VA  C + +H+ V   E   AG    +A++     + M R         I G + +  S   EG        +  DH                   GSTA VA++ + ++VVAN GDSR VL R G  + LS D  PD   E +R   AGG
Sbjct:   74 RHGAASVAGRRREMEDAVSLREAFAAPANGEVAAARCDFYGVFDGHGCSHVADACRERMHELVA--EEMGAGSPAAAAREPASWTETMERSFARMDAEVIAGCRAESGSCRCEG--------QKCDHV------------------GSTAVVAVVEESRVVVANCGDSRAVLCRGGAPVQLSSDHKPDRPDELERIEAAGG 246          
The following BLAST results are available for this feature:
BLAST of EY660118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
P2C09_ORYSJ4.641e-1632.65Probable protein phosphatase 2C 9 OS=Oryza sativa ... [more]
P2C16_ARATH6.273e-1330.81Protein phosphatase 2C 16 OS=Arabidopsis thaliana ... [more]
P2C07_ARATH8.193e-1331.28Protein phosphatase 2C 7 OS=Arabidopsis thaliana G... [more]
P2C68_ORYSJ1.070e-1230.85Probable protein phosphatase 2C 68 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-018-G02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660118 ID=EY660118; Name=EY660118; organism=Citrus sinensis; type=EST; length=920bp
CCACGCGTCCGCACTCTTAACTTATCTCATTATCTCTCTGCTCAAAGTAA
AGAAAATGGGGGTATATCTGAGCACCCCCAAGACTGAGAAGTTCTCGGAG
GATGGTCAAAATGAGAATGTTCGATATGGATTGTCGTCGATGCAGGGGTG
GCGTGCGACCATGGAAGATGCTCATGCAGCTTATCCAGATTTGGACAGTT
CTACATCTTTCTTTGGTGTTTATGATGGCCACGGTGGTAAAGCAGTGGCC
AAATTTTGTGCCAAGTATCTTCACCAGCAGGTGCTCAAACATGAAGCTTA
TTCAGCTGGAGATTTAGTCACTTCAGCACAGAAAGCTTTTCTCAGAATGG
ATGAGATGATGCGTGGACAAAGGGGATGGAGAGAATTAGCTATACTGGGA
GATAAAATGGACAAGTTTTCTGGCATGATTGAGGGGTTCATATGGTCTCC
TAAGGGTGGTGAAGCCAATGATCATTTTGACGATTGGACATCGGAGGAGG
GTCCTCACTCAGATTTTCATGGACCAACTTCTGGAAGTACAGCTTGCGTA
GCAATCATTAGAGACAAGCAACTCGTGGTTGCAAATGCTGGTGATTCTCG
TTGTGTGTTATCGAGGAAGGGCCAGGCACTTAATCTATCTAAAGACCCTT
AACCTGATCTTGAGGNTGAGAAAGATAGATTTCTCAAAGCTGGTGGGTTT
ATACAAGTTGGACGTGCTAAGGAAATTTTAATTTGGCGAAAGCTTTGGAG
ATGGGGAATTCAAGCTAAACAAATTTTGCCGGTTGAAAAAAGATTGTGAC
TGCCATTCCTGATTTAGAACTTTTGAACTTTGGATGACGAGGAGTTCTTG
GCTAGCCTGGGATGGATTTGGATTGCCTTTCAAAGCAAAACTTGCAATTT
TCCCGGGTCCTTTACCACGA
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