EY660117

Overview
NameEY660117
Unique NameEY660117
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length935
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY660117_ssr883 microsatellite EY660117_ssr883:883..894. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALF1_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.769e-40
Identity = 79/129 (61.24%), Postives = 97/129 (75.19%), Query Frame = 3
Query:  207 GSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLAPRTAAYY 593
            G YADEL+K AK +A+PG+GILA DES  T GKRLASI +EN EANRQA R LL T+P   QY+SG ILFEETLYQ +++GK  V++L E N++PGIKVDKG+V LAG++ E+  QG D L  R   YY
Sbjct:    6 GKYADELIKNAKYIATPGKGILAADESTGTIGKRLASINVENIEANRQALRELLFTSPNALQYLSGVILFEETLYQKSSEGKPFVEILQENNVIPGIKVDKGVVELAGTDGETTTQGFDSLGARCQQYY 134          

HSP 2 Score: 26.1794 bits (56), Expect = 1.769e-40
Identity = 20/54 (37.04%), Postives = 24/54 (44.44%), Query Frame = 2
Query:  599 GARFRKWRTVVNI-PMAHLPWKSRKPPGVLPAMLAFGLDNGLVPIGEAEILV*G 757
            GARF KWR V+ I P        ++    L        +NGLV   E EIL  G
Sbjct:  137 GARFAKWRAVLKIGPNEPSELSIQQNAQGLARYAIICQENGLVLFVEPEILTDG 190          
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALF_SPIOL (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 8.070e-40
Identity = 103/243 (42.39%), Postives = 133/243 (54.73%), Query Frame = 3
Query:  192 LTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLAPRTAAYY--NRELVSANGVLL--*TSPWPICLGSQGSRLGSCPLCWHLV*TTDWSQLGKQKSLFEGEHGIDRTFEKTKRVGAESFSTLL-RQCQV*GISLQPNWAPRGRKEGKAPP 905
            +T   G YADEL+  A  +A+PG+ ILA DES  T GKR  SI +EN E+NR+A R LL T PG   Y+SG ILFEETLYQ T DGK  VD + +  ++PGIKVDKG V LAG+N E+  QGLDGLA R A YY           VL    T P P+ +    + L    +   +        + + + L +G H IDR  E ++RV A  +  L      + G SL+PN    G +  K  P
Sbjct:    1 MTAYRGKYADELIANASYIATPGKVILAADESTGTIGKRFPSINVENVESNRRALRELLFTTPGALPYLSGVILFEETLYQKTADGKPFVDAMKDGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCAQYYTAGARFAKWRAVLKIGPTEPSPLAILENANGLARYGI---ICQENGLVPIVEPEILVDGTHDIDRCAEVSERVLAACYKALNDHHVLLEGTSLKPNIVTPGSESKKVTP 240          
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALF_MAIZE (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Zea mays PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 9.362e-39
Identity = 75/129 (58.14%), Postives = 89/129 (68.99%), Query Frame = 3
Query:  207 GSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLAPRTAAYY 593
            G Y DEL+K A  + +PG+GILA DES  T GKRL+SI +EN E NR+A R LL   PG  QYISG ILFEETLYQ T DGK  VDVL E  ++PGIKVDKG + + G++ E+  QG D L  R A YY
Sbjct:    6 GKYKDELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEENRRALRELLFCCPGALQYISGVILFEETLYQKTKDGKPFVDVLKEGGVLPGIKVDKGTIEVVGTDKETTTQGHDDLGKRCAKYY 134          

HSP 2 Score: 33.113 bits (74), Expect = 9.362e-39
Identity = 25/63 (39.68%), Postives = 31/63 (49.21%), Query Frame = 2
Query:  593 QQGARFRKWRTVVNIPMAHLPWKSRKPPGVLPAMLAFGL--------DNGLVPIGEAEILV*G 757
            + GARF KWR V+ I          +P  +   + A GL        +NGLVPI E EILV G
Sbjct:  135 EAGARFAKWRAVLKIG-------PNEPSQLAIDLNAQGLARYAIICQENGLVPIVEPEILVDG 190          
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALF_ORYSJ (Fructose-bisphosphate aldolase cytoplasmic isozyme OS=Oryza sativa subsp. japonica GN=FBA PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 2.070e-38
Identity = 74/129 (57.36%), Postives = 88/129 (68.22%), Query Frame = 3
Query:  207 GSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLAPRTAAYY 593
            G Y DEL+K A  + +PG+GILA DES  T GKR ASI +EN E NR++ R LL   PG  QY+SG ILFEETLYQ T DGK  VDVL E  ++PGIKVDKG + +AG+  E+  QG D L  R A YY
Sbjct:    6 GKYKDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEENRRSLRELLFCTPGALQYLSGVILFEETLYQKTKDGKPFVDVLKEGGVLPGIKVDKGTIEVAGTEKETTTQGHDDLGKRCAKYY 134          

HSP 2 Score: 33.113 bits (74), Expect = 2.070e-38
Identity = 25/63 (39.68%), Postives = 31/63 (49.21%), Query Frame = 2
Query:  593 QQGARFRKWRTVVNIPMAHLPWKSRKPPGVLPAMLAFGL--------DNGLVPIGEAEILV*G 757
            + GARF KWR V+ I          +P  +   + A GL        +NGLVPI E EILV G
Sbjct:  135 EAGARFAKWRAVLKIG-------PNEPSQLAIDLNAQGLARYAIICQENGLVPIVEPEILVDG 190          
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALF2_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 2 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.237e-37
Identity = 77/128 (60.16%), Postives = 90/128 (70.31%), Query Frame = 3
Query:  213 YADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLG-QYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLAPRTAAYY 593
            Y DEL+  A  + +PG+GILA DES  T GKRL+SI +EN E+NRQA R LL TA  L  QY+SG ILFEETLYQ T  GK  VDVL E  ++PGIKVDKG V LAG++ E+  QGLDGL  R   YY
Sbjct:    8 YHDELIANAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRQALRELLFTASWLFLQYLSGVILFEETLYQKTAAGKPFVDVLNEAGVLPGIKVDKGTVELAGTDGETTTQGLDGLGARCRKYY 135          

HSP 2 Score: 32.7278 bits (73), Expect = 2.237e-37
Identity = 25/63 (39.68%), Postives = 31/63 (49.21%), Query Frame = 2
Query:  593 QQGARFRKWRTVVNIPMAHLPWKSRKPPGVLPAMLAFGL--------DNGLVPIGEAEILV*G 757
            + GARF KWR V+ I        + +P        A+GL        +NGLVPI E EILV G
Sbjct:  136 EAGARFAKWRAVLKIG-------ANEPSEHSIHENAYGLARYAVICQENGLVPIVEPEILVDG 191          
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALF_DICDI (Fructose-bisphosphate aldolase OS=Dictyostelium discoideum GN=fba PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.093e-36
Identity = 72/128 (56.25%), Postives = 89/128 (69.53%), Query Frame = 3
Query:  213 YADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLV-TAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLAPRTAAYY 593
            +ADEL+ TAK + +PG+GILA DES  T G R   I LEN E NR+AYR LL+ T  G+ ++I G IL+EETLYQ   DG+   DVL EQ I  GIKVDKG+VP+ G++ E+  QGLDGLA R   YY
Sbjct:    5 FADELIATAKAIVAPGKGILAADESTNTIGARFKKINLENNEENRRAYRELLIGTGNGVNEFIGGIILYEETLYQKMADGRLFTDVLREQKIHIGIKVDKGVVPIPGTDGETSTQGLDGLAERCKKYY 132          

HSP 2 Score: 34.6538 bits (78), Expect = 1.093e-36
Identity = 23/58 (39.66%), Postives = 29/58 (50.00%), Query Frame = 2
Query:  593 QQGARFRKWRTVVNIPMAH---LPWKSRKPPGVLPAMLAFGLDNGLVPIGEAEILV*G 757
            + GARF KWR V+ I +A          +    L    A   +NGLVPI E EIL+ G
Sbjct:  133 EAGARFAKWRAVLKIDLAKNCPSQLSITENAHTLARYAAICQENGLVPIVEPEILMDG 190          
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALF_ECHMU (Fructose-bisphosphate aldolase OS=Echinococcus multilocularis GN=FBPA PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.538e-35
Identity = 72/126 (57.14%), Postives = 89/126 (70.63%), Query Frame = 3
Query:  222 ELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTA-PGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLAPRTAAYYN 596
            EL + A  + +PG+G+LA DES  T GKR A+I LENTE NR+AYR LL T  P   ++ISG ILF ET+YQ T DGK  V++L E+ ++PGIKVD G+VPL G+ DE   QGLD LA R A YYN
Sbjct:   15 ELRENASAIVAPGKGLLAADESTNTIGKRFAAINLENTEENRRAYRELLFTTDPEFAKHISGVILFHETVYQKTKDGKPFVELLRERGVLPGIKVDLGVVPLGGTADECTTQGLDNLAQRCAQYYN 140          

HSP 2 Score: 30.4166 bits (67), Expect = 1.538e-35
Identity = 20/51 (39.22%), Postives = 26/51 (50.98%), Query Frame = 2
Query:  599 GARFRKWRTVVNIPMAHLPWKSRKPPGVLPAMLAFGLD-NGLVPIGEAEIL 748
            G RF KWR V+ I   +  + +      + A  AF    NGLVPI E E+L
Sbjct:  142 GCRFAKWRCVLKISSHNPSYLAMLENANVLARYAFICQQNGLVPIVEPEVL 192          
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALF_SCHMA (Fructose-bisphosphate aldolase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.399e-35
Identity = 71/126 (56.35%), Postives = 94/126 (74.60%), Query Frame = 3
Query:  219 DELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLAPRTAAYY 593
            ++L + A+ + +PG+GILA DES AT GKRL  IG+EN E NR+ YR LL +A   L + ISG ILFEETL+Q + DGK +  +L E+NI+PGIKVDKG+VPLAG+++E+  QGLD LA R A Y+
Sbjct:   14 NDLRRIAQAICAPGKGILAADESTATMGKRLQQIGVENNEENRRLYRQLLFSADHKLAENISGVILFEETLHQKSDDGKTLPTLLAERNIIPGIKVDKGVVPLAGTDNETTTQGLDDLASRCAEYW 139          

HSP 2 Score: 31.5722 bits (70), Expect = 3.399e-35
Identity = 21/52 (40.38%), Postives = 26/52 (50.00%), Query Frame = 2
Query:  599 GARFRKWRTVVNIPMAHLP--WKSRKPPGVLPAMLAFGLDNGLVPIGEAEIL 748
            G RF KWR V+ I  +H P      +   VL    +    NGLVPI E E+L
Sbjct:  142 GCRFAKWRCVLKIS-SHTPSYLAMLENANVLARYASICQQNGLVPIVEPEVL 192          
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALF2_CAEEL (Fructose-bisphosphate aldolase 2 OS=Caenorhabditis elegans GN=aldo-2 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 4.426e-35
Identity = 72/124 (58.06%), Postives = 87/124 (70.16%), Query Frame = 3
Query:  219 DELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLAPRTAAY 590
            DEL + A  +   G+GILA DES  T GKRL +I LEN E NRQ YR LL T P L Q+ISG IL+EET +QST  G+K  D+L++Q IVPGIK+D G+VPLAG+  E   QGLD LA R AA+
Sbjct:   18 DELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPNLNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGLDKLAERAAAF 141          

HSP 2 Score: 29.6462 bits (65), Expect = 4.426e-35
Identity = 22/55 (40.00%), Postives = 26/55 (47.27%), Query Frame = 2
Query:  599 GARFRKWRTVVNIPMAHLPWK--SRKPPGVLPAMLAFGLDNGLVPIGEAEILV*G 757
            G  F KWR V+NI   H P      +   VL    +    NGLVPI E E+L  G
Sbjct:  145 GCGFAKWRCVLNIG-THTPSHLGMLENANVLARYASICQANGLVPIVEPEVLCDG 198          
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALF1_XANAC (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas axonopodis pv. citri GN=XAC3344 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 6.229e-34
Identity = 66/125 (52.80%), Postives = 86/125 (68.80%), Query Frame = 3
Query:  219 DELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLAPRTAAYY 593
            ++L +TA+ + +PG+GI+A+DES +T  KR AS+G+EN E NR+AYR LL+T P L  YISGAILF+ET+ Q T DG    + +    I+PGIKVDKG  PLAG   E   +GLDGL  R   YY
Sbjct:    4 EQLAETAQAMVAPGKGIIAIDESTSTIAKRFASVGIENIEENRRAYRELLLTTPKLSDYISGAILFDETIRQKTKDGVPFAEYMTAHGIIPGIKVDKGAQPLAGMPGELVTEGLDGLRARLEEYY 128          

HSP 2 Score: 29.6462 bits (65), Expect = 6.229e-34
Identity = 20/55 (36.36%), Postives = 28/55 (50.91%), Query Frame = 2
Query:  599 GARFRKWRTVVNIPMAHLPWKS--RKPPGVLPAMLAFGLDNGLVPIGEAEILV*G 757
            GARF KWR V+NI    +P  +        L    A   + GLVP+ E E+++ G
Sbjct:  131 GARFAKWRAVINIG-EDIPSGTCIEANSHALARYAALCQEQGLVPMVEPEVIMDG 184          
The following BLAST results are available for this feature:
BLAST of EY660117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALF1_PEA1.769e-4061.24Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_SPIOL8.070e-4042.39Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_MAIZE9.362e-3958.14Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_ORYSJ2.070e-3857.36Fructose-bisphosphate aldolase cytoplasmic isozyme... [more]
ALF2_PEA2.237e-3760.16Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_DICDI1.093e-3656.25Fructose-bisphosphate aldolase OS=Dictyostelium di... [more]
ALF_ECHMU1.538e-3557.14Fructose-bisphosphate aldolase OS=Echinococcus mul... [more]
ALF_SCHMA3.399e-3556.35Fructose-bisphosphate aldolase OS=Schistosoma mans... [more]
ALF2_CAEEL4.426e-3558.06Fructose-bisphosphate aldolase 2 OS=Caenorhabditis... [more]
ALF1_XANAC6.229e-3452.80Probable fructose-bisphosphate aldolase class 1 OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-018-G01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660117 ID=EY660117; Name=EY660117; organism=Citrus sinensis; type=EST; length=935bp
CCACGCGTCCGCGGACGCGTGTGCCAGCTCAGAACCCACAGCAAGAAGAA
GCAAAGAGGAAAATGGCCTCAGCCTCGGCATCTTTACTCAAGTCATCATC
CCCCGTTCTTGACAAGTCTGAGTGGGTTAAGGGCCAGGCCATCCGCCAGT
CTACTGTCTCAGTCCGCAGCCTCCCCAGTGGCCCCTCTTCCCTCACCATC
CGTGCTGGTTCCTATGCCGATGAGCTTGTCAAGACCGCGAAAACTGTTGC
ATCACCAGGACGTGGAATTTTGGCCATGGATGAGTCAAATGCAACTTGTG
GAAAACGCCTTGCCTCAATTGGGTTAGAGAACACTGAGGCTAACCGCCAG
GCATACCGTACCCTCCTTGTTACAGCCCCTGGTCTTGGACAGTACATCTC
TGGTGCCATCCTTTTTGAGGAGACTCTCTACCAATCCACCACCGATGGCA
AGAAGATGGTCGATGTTCTTGTTGAGCAAAACATTGTCCCCGGTATCAAA
GTCGACAAGGGTTTGGTGCCCCTTGCTGGTTCCAATGATGAGTCATGGTG
CCAGGGTCTTGATGGCCTGGCTCCTCGCACTGCTGCTTACTACAACAGGG
AGCTCGTTTCCGCAAATGGCGTACTGTTGTGAACATCCCCATGGCCCATC
TGCCTTGGAAGTCAAGGAAGCCGCCTGGGGTCCTGCCCGCTATGCTGGCA
TTTGGTCTAGACAACGGATTGGTCCCAATTGGGGAAGCAGAAATCCTTGT
TTGAGGGGGAACATGGAATTGACAGGACTTTTGAAAAAACTAAAAGGGTT
GGGGCTGAAAGTTTCTCTACCTTGCTGAGACAATGCCAGGTTTGAGGGAT
TTCCCTCCAACCAAACTGGGCACCCCGGGGGCGGAAGGAAGGAAAAGCCC
CCCCAACAGGTGTCAGGACACCCTAAACTCCTCAA
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