EY660117

Overview
NameEY660117
Unique NameEY660117
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length935
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY660117_ssr883 microsatellite EY660117_ssr883:883..894. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALDOA_RAT (Fructose-bisphosphate aldolase A OS=Rattus norvegicus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 6.432e-30
Identity = 67/124 (54.03%), Postives = 81/124 (65.32%), Query Frame = 3 
Query:  222 ELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLAPRTAAY 590
            EL   A  + +PG+GILA DES  +  KRL SIG ENTE NR+ YR LL+TA   +   I G ILF ETLYQ   DG+    V+  +  V GIKVDKG+VPLAG+N E+  QGLDGL+ R A Y
Sbjct:   15 ELADIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQY 138

HSP 2 Score: 29.261 bits (64), Expect = 6.432e-30
Identity = 21/54 (38.89%), Postives = 26/54 (48.15%), Query Frame = 2 
Query:  593 QQGARFRKWRTVVNIPMAHLPWKSR--KPPGVLPAMLAFGLDNGLVPIGEAEIL 748
            + GA F KWR V+ I   H P      +   VL    +    NG+VPI E EIL
Sbjct:  140 KDGADFAKWRCVLKIG-EHTPSSLAIMENANVLARYASICQQNGIVPIVEPEIL 192
[Close]
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALDOA_PANTR (Fructose-bisphosphate aldolase A OS=Pan troglodytes GN=ALDOA PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 8.375e-30
Identity = 67/124 (54.03%), Postives = 81/124 (65.32%), Query Frame = 3 
Query:  222 ELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLAPRTAAY 590
            EL   A  + +PG+GILA DES  +  KRL SIG ENTE NR+ YR LL+TA   +   I G ILF ETLYQ   DG+    V+  +  V GIKVDKG+VPLAG+N E+  QGLDGL+ R A Y
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIVGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQY 138

HSP 2 Score: 30.4166 bits (67), Expect = 8.375e-30
Identity = 21/54 (38.89%), Postives = 26/54 (48.15%), Query Frame = 2 
Query:  593 QQGARFRKWRTVVNIPMAHLP--WKSRKPPGVLPAMLAFGLDNGLVPIGEAEIL 748
            + GA F KWR V+ I   H P      +   VL    +    NG+VPI E EIL
Sbjct:  140 KDGADFAKWRCVLKIG-EHTPSALAIMENANVLARYASICQQNGIVPIAEPEIL 192
[Close]
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALDCB_DANRE (Fructose-bisphosphate aldolase C-B OS=Danio rerio GN=aldocb PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.090e-29
Identity = 65/124 (52.42%), Postives = 84/124 (67.74%), Query Frame = 3 
Query:  222 ELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLAPRTAAY 590
            EL   A+ + +PG+GILA DES  +  KRL  IG+ENTE NR+ YR LL +A   + + I G I F ETLYQ+T DG     ++ ++ IV GIKVDKG+VPLAG+N E+  QGLDGL+ R A Y
Sbjct:   15 ELQDIAQRIVAPGKGILAADESTGSMAKRLNPIGVENTEENRRLYRQLLFSADERIDKCIGGVIFFHETLYQNTDDGTNFAQLIKDRGIVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQY 138

HSP 2 Score: 28.1054 bits (61), Expect = 1.090e-29
Identity = 19/53 (35.85%), Postives = 25/53 (47.17%), Query Frame = 2 
Query:  593 QQGARFRKWRTVVNIP-MAHLPWKSRKPPGVLPAMLAFGLDNGLVPIGEAEIL 748
            + GA F KWR+V+ I           +   VL    +    NG+VPI E EIL
Sbjct:  140 KDGADFAKWRSVLKISDTTPSELAIMENANVLARYASICQQNGIVPIVEPEIL 192
[Close]
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALDOA_RABIT (Fructose-bisphosphate aldolase A OS=Oryctolagus cuniculus GN=ALDOA PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 1.090e-29
Identity = 67/124 (54.03%), Postives = 81/124 (65.32%), Query Frame = 3 
Query:  222 ELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLAPRTAAY 590
            EL   A  + +PG+GILA DES  +  KRL SIG ENTE NR+ YR LL+TA   +   I G ILF ETLYQ   DG+    V+  +  V GIKVDKG+VPLAG+N E+  QGLDGL+ R A Y
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQY 138

HSP 2 Score: 29.261 bits (64), Expect = 1.090e-29
Identity = 21/54 (38.89%), Postives = 26/54 (48.15%), Query Frame = 2 
Query:  593 QQGARFRKWRTVVNIPMAHLP--WKSRKPPGVLPAMLAFGLDNGLVPIGEAEIL 748
            + GA F KWR V+ I   H P      +   VL    +    NG+VPI E EIL
Sbjct:  140 KDGADFAKWRCVLKIG-EHTPSALAIMENANVLARYASICQQNGIVPIVEPEIL 192
[Close]
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALDOA_PONAB (Fructose-bisphosphate aldolase A OS=Pongo abelii GN=ALDOA PE=2 SV=3)

HSP 1 Score: 122.479 bits (306), Expect = 1.090e-29
Identity = 67/124 (54.03%), Postives = 81/124 (65.32%), Query Frame = 3 
Query:  222 ELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLAPRTAAY 590
            EL   A  + +PG+GILA DES  +  KRL SIG ENTE NR+ YR LL+TA   +   I G ILF ETLYQ   DG+    V+  +  V GIKVDKG+VPLAG+N E+  QGLDGL+ R A Y
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQY 138

HSP 2 Score: 29.261 bits (64), Expect = 1.090e-29
Identity = 21/54 (38.89%), Postives = 26/54 (48.15%), Query Frame = 2 
Query:  593 QQGARFRKWRTVVNIPMAHLP--WKSRKPPGVLPAMLAFGLDNGLVPIGEAEIL 748
            + GA F KWR V+ I   H P      +   VL    +    NG+VPI E EIL
Sbjct:  140 KDGADFAKWRCVLKIG-EHTPSALAIMENANVLARYASICQQNGIVPIVEPEIL 192
[Close]
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALDOA_MOUSE (Fructose-bisphosphate aldolase A OS=Mus musculus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 1.090e-29
Identity = 67/124 (54.03%), Postives = 81/124 (65.32%), Query Frame = 3 
Query:  222 ELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLAPRTAAY 590
            EL   A  + +PG+GILA DES  +  KRL SIG ENTE NR+ YR LL+TA   +   I G ILF ETLYQ   DG+    V+  +  V GIKVDKG+VPLAG+N E+  QGLDGL+ R A Y
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQY 138

HSP 2 Score: 29.261 bits (64), Expect = 1.090e-29
Identity = 21/54 (38.89%), Postives = 26/54 (48.15%), Query Frame = 2 
Query:  593 QQGARFRKWRTVVNIPMAHLP--WKSRKPPGVLPAMLAFGLDNGLVPIGEAEIL 748
            + GA F KWR V+ I   H P      +   VL    +    NG+VPI E EIL
Sbjct:  140 KDGADFAKWRCVLKIG-EHTPSALAIMENANVLARYASICQQNGIVPIVEPEIL 192
[Close]
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALDOA_HUMAN (Fructose-bisphosphate aldolase A OS=Homo sapiens GN=ALDOA PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 1.090e-29
Identity = 67/124 (54.03%), Postives = 81/124 (65.32%), Query Frame = 3 
Query:  222 ELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLAPRTAAY 590
            EL   A  + +PG+GILA DES  +  KRL SIG ENTE NR+ YR LL+TA   +   I G ILF ETLYQ   DG+    V+  +  V GIKVDKG+VPLAG+N E+  QGLDGL+ R A Y
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQY 138

HSP 2 Score: 29.261 bits (64), Expect = 1.090e-29
Identity = 21/54 (38.89%), Postives = 26/54 (48.15%), Query Frame = 2 
Query:  593 QQGARFRKWRTVVNIPMAHLP--WKSRKPPGVLPAMLAFGLDNGLVPIGEAEIL 748
            + GA F KWR V+ I   H P      +   VL    +    NG+VPI E EIL
Sbjct:  140 KDGADFAKWRCVLKIG-EHTPSALAIMENANVLARYASICQQNGIVPIVEPEIL 192
[Close]
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALDOC_CARAU (Fructose-bisphosphate aldolase C OS=Carassius auratus GN=aldoc PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.407e-29
Identity = 65/124 (52.42%), Postives = 82/124 (66.13%), Query Frame = 3 
Query:  222 ELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLAPRTAAY 590
            EL   A+ + +PG+GILA DES  +  KRL  IG+ENTE NR+ YR LL TA   + + I G I F ETLYQ   DG     ++ ++ IV GIKVDKG+VPLAG+N E+  QGLDGL+ R A Y
Sbjct:   15 ELQDIAQRIVAPGKGILAADESTGSMAKRLNPIGVENTEENRRLYRQLLFTADERMDKCIGGVIFFHETLYQKADDGTPFAKMIKDRGIVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQY 138

HSP 2 Score: 28.4906 bits (62), Expect = 2.407e-29
Identity = 19/53 (35.85%), Postives = 26/53 (49.06%), Query Frame = 2 
Query:  593 QQGARFRKWRTVVNIP-MAHLPWKSRKPPGVLPAMLAFGLDNGLVPIGEAEIL 748
            + GA F KWR+V+ I   +       +   VL    +    NG+VPI E EIL
Sbjct:  140 KDGADFAKWRSVLKISETSPSELAIMENANVLARYASICQQNGIVPIVEPEIL 192
[Close]
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALDOB_SHEEP (Fructose-bisphosphate aldolase B OS=Ovis aries GN=ALDOB PE=2 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 7.431e-28
Identity = 64/123 (52.03%), Postives = 81/123 (65.85%), Query Frame = 3 
Query:  225 LVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLAPRTAAY 590
            L +TA+ + + G+GILA DES  T G RL  I +ENTE NR+ +R LL T    + Q I G ILF ETLYQ    GK   D+L E+ IV GIK+D+G+ PLAG+N E+  QGLDGL+ R A Y
Sbjct:   16 LSETARRIVANGKGILAADESVGTMGNRLQRIKVENTEENRRQFRELLFTVDSSVSQSIGGVILFHETLYQKDGQGKLFRDILKEKGIVVGIKLDQGVAPLAGTNKETTVQGLDGLSERCAQY 138

HSP 2 Score: 27.7202 bits (60), Expect = 7.431e-28
Identity = 19/55 (34.55%), Postives = 26/55 (47.27%), Query Frame = 2 
Query:  593 QQGARFRKWRTVVNIPM---AHLPWKSRKPPGVLPAMLAFGLDNGLVPIGEAEIL 748
            + GA F KWR V+ I     +HL  +       L    +    NGLVPI E E++
Sbjct:  140 KDGADFGKWRAVLKIDNQCPSHLAIQENA--NTLARYASIYQQNGLVPIVEPEVI 192
[Close]
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALDOB_BOVIN (Fructose-bisphosphate aldolase B OS=Bos taurus GN=ALDOB PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.431e-28
Identity = 64/123 (52.03%), Postives = 81/123 (65.85%), Query Frame = 3 
Query:  225 LVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLAPRTAAY 590
            L +TA+ + + G+GILA DES  T G RL  I +ENTE NR+ +R LL T    + Q I G ILF ETLYQ    GK   D+L E+ IV GIK+D+G+ PLAG+N E+  QGLDGL+ R A Y
Sbjct:   16 LSETARRIVANGKGILAADESVGTMGNRLQRIKVENTEENRRQFRELLFTVDSSVSQSIGGVILFHETLYQKDGQGKLFRDILKEKGIVVGIKLDQGVAPLAGTNKETTVQGLDGLSERCAQY 138

HSP 2 Score: 27.7202 bits (60), Expect = 7.431e-28
Identity = 19/55 (34.55%), Postives = 26/55 (47.27%), Query Frame = 2 
Query:  593 QQGARFRKWRTVVNIPM---AHLPWKSRKPPGVLPAMLAFGLDNGLVPIGEAEIL 748
            + GA F KWR V+ I     +HL  +       L    +    NGLVPI E E++
Sbjct:  140 KDGADFGKWRAVLKIDNQCPSHLAIQENA--NTLARYASICQQNGLVPIVEPEVI 192
The following BLAST results are available for this feature:
BLAST of EY660117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALDOA_RAT6.432e-3054.03Fructose-bisphosphate aldolase A OS=Rattus norvegi... [more]
ALDOA_PANTR8.375e-3054.03Fructose-bisphosphate aldolase A OS=Pan troglodyte... [more]
ALDCB_DANRE1.090e-2952.42Fructose-bisphosphate aldolase C-B OS=Danio rerio ... [more]
ALDOA_RABIT1.090e-2954.03Fructose-bisphosphate aldolase A OS=Oryctolagus cu... [more]
ALDOA_PONAB1.090e-2954.03Fructose-bisphosphate aldolase A OS=Pongo abelii G... [more]
ALDOA_MOUSE1.090e-2954.03Fructose-bisphosphate aldolase A OS=Mus musculus G... [more]
ALDOA_HUMAN1.090e-2954.03Fructose-bisphosphate aldolase A OS=Homo sapiens G... [more]
ALDOC_CARAU2.407e-2952.42Fructose-bisphosphate aldolase C OS=Carassius aura... [more]
ALDOB_SHEEP7.431e-2852.03Fructose-bisphosphate aldolase B OS=Ovis aries GN=... [more]
ALDOB_BOVIN7.431e-2852.03Fructose-bisphosphate aldolase B OS=Bos taurus GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-018-G01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660117 ID=EY660117; Name=EY660117; organism=Citrus sinensis; type=EST; length=935bp
CCACGCGTCCGCGGACGCGTGTGCCAGCTCAGAACCCACAGCAAGAAGAA
GCAAAGAGGAAAATGGCCTCAGCCTCGGCATCTTTACTCAAGTCATCATC
CCCCGTTCTTGACAAGTCTGAGTGGGTTAAGGGCCAGGCCATCCGCCAGT
CTACTGTCTCAGTCCGCAGCCTCCCCAGTGGCCCCTCTTCCCTCACCATC
CGTGCTGGTTCCTATGCCGATGAGCTTGTCAAGACCGCGAAAACTGTTGC
ATCACCAGGACGTGGAATTTTGGCCATGGATGAGTCAAATGCAACTTGTG
GAAAACGCCTTGCCTCAATTGGGTTAGAGAACACTGAGGCTAACCGCCAG
GCATACCGTACCCTCCTTGTTACAGCCCCTGGTCTTGGACAGTACATCTC
TGGTGCCATCCTTTTTGAGGAGACTCTCTACCAATCCACCACCGATGGCA
AGAAGATGGTCGATGTTCTTGTTGAGCAAAACATTGTCCCCGGTATCAAA
GTCGACAAGGGTTTGGTGCCCCTTGCTGGTTCCAATGATGAGTCATGGTG
CCAGGGTCTTGATGGCCTGGCTCCTCGCACTGCTGCTTACTACAACAGGG
AGCTCGTTTCCGCAAATGGCGTACTGTTGTGAACATCCCCATGGCCCATC
TGCCTTGGAAGTCAAGGAAGCCGCCTGGGGTCCTGCCCGCTATGCTGGCA
TTTGGTCTAGACAACGGATTGGTCCCAATTGGGGAAGCAGAAATCCTTGT
TTGAGGGGGAACATGGAATTGACAGGACTTTTGAAAAAACTAAAAGGGTT
GGGGCTGAAAGTTTCTCTACCTTGCTGAGACAATGCCAGGTTTGAGGGAT
TTCCCTCCAACCAAACTGGGCACCCCGGGGGCGGAAGGAAGGAAAAGCCC
CCCCAACAGGTGTCAGGACACCCTAAACTCCTCAA
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