EY660117

Overview
NameEY660117
Unique NameEY660117
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length935
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY660117_ssr883 microsatellite EY660117_ssr883:883..894. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALDOC_PANTR (Fructose-bisphosphate aldolase C OS=Pan troglodytes GN=ALDOC PE=2 SV=3)

HSP 1 Score: 116.316 bits (290), Expect = 2.778e-27
Identity = 63/137 (45.99%), Postives = 86/137 (62.77%), Query Frame = 3
Query:  183 PSSLTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLAPRTAAY 590
            P S    +     EL   A  + +PG+GILA DES  +  KRL+ IG+ENTE NR+ YR +L +A   + + I G I F ETLYQ   +G   +  ++++ IV GIKVDKG+VPLAG++ E+  QGLDGL+ R A Y
Sbjct:    2 PHSYPALSAEQKKELSDIALRIVAPGKGILAADESVGSMAKRLSQIGVENTEENRRLYRQVLFSADDRVKKCIGGVIFFHETLYQKDDNGVPFIRTILDKGIVVGIKVDKGVVPLAGTDGETTTQGLDGLSERCAQY 138          

HSP 2 Score: 27.335 bits (59), Expect = 2.778e-27
Identity = 21/61 (34.43%), Postives = 26/61 (42.62%), Query Frame = 2
Query:  593 QQGARFRKWRTVVNIPMAHLPWKSRKPPG---------VLPAMLAFGLDNGLVPIGEAEIL 748
            + GA F KWR V+ I        S + P          VL    +    NG+VPI E EIL
Sbjct:  140 KDGADFAKWRCVLKI--------SERTPSALAILENANVLARYASICQQNGIVPIVEPEIL 192          
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALDOC_MACFA (Fructose-bisphosphate aldolase C OS=Macaca fascicularis GN=ALDOC PE=2 SV=3)

HSP 1 Score: 115.546 bits (288), Expect = 4.708e-27
Identity = 64/137 (46.72%), Postives = 85/137 (62.04%), Query Frame = 3
Query:  183 PSSLTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLAPRTAAY 590
            P S    +     EL   A  + +PG+GILA DES  +  KRL+ IG+ENTE NR+ YR +L +A   + + I G I F ETLYQ   +G   V  + ++ IV GIKVDKG+VPLAG++ E+  QGLDGL+ R A Y
Sbjct:    2 PHSYPALSAEQKKELSDIALRIVAPGKGILAADESVGSMAKRLSQIGVENTEENRRLYRQVLFSADDRVKKCIGGVIFFHETLYQKDDNGVPFVRTIQDKGIVVGIKVDKGVVPLAGTDGETTTQGLDGLSERCAQY 138          

HSP 2 Score: 27.335 bits (59), Expect = 4.708e-27
Identity = 21/61 (34.43%), Postives = 26/61 (42.62%), Query Frame = 2
Query:  593 QQGARFRKWRTVVNIPMAHLPWKSRKPPG---------VLPAMLAFGLDNGLVPIGEAEIL 748
            + GA F KWR V+ I        S + P          VL    +    NG+VPI E EIL
Sbjct:  140 KDGADFAKWRCVLKI--------SERTPSALAILENANVLARYASICQQNGIVPIVEPEIL 192          
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALDOC_HUMAN (Fructose-bisphosphate aldolase C OS=Homo sapiens GN=ALDOC PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 4.708e-27
Identity = 64/137 (46.72%), Postives = 85/137 (62.04%), Query Frame = 3
Query:  183 PSSLTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLAPRTAAY 590
            P S    +     EL   A  + +PG+GILA DES  +  KRL+ IG+ENTE NR+ YR +L +A   + + I G I F ETLYQ   +G   V  + ++ IV GIKVDKG+VPLAG++ E+  QGLDGL+ R A Y
Sbjct:    2 PHSYPALSAEQKKELSDIALRIVAPGKGILAADESVGSMAKRLSQIGVENTEENRRLYRQVLFSADDRVKKCIGGVIFFHETLYQKDDNGVPFVRTIQDKGIVVGIKVDKGVVPLAGTDGETTTQGLDGLSERCAQY 138          

HSP 2 Score: 27.335 bits (59), Expect = 4.708e-27
Identity = 21/61 (34.43%), Postives = 26/61 (42.62%), Query Frame = 2
Query:  593 QQGARFRKWRTVVNIPMAHLPWKSRKPPG---------VLPAMLAFGLDNGLVPIGEAEIL 748
            + GA F KWR V+ I        S + P          VL    +    NG+VPI E EIL
Sbjct:  140 KDGADFAKWRCVLKI--------SERTPSALAILENANVLARYASICQQNGIVPIVEPEIL 192          
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALDOC_RAT (Fructose-bisphosphate aldolase C OS=Rattus norvegicus GN=Aldoc PE=1 SV=3)

HSP 1 Score: 114.775 bits (286), Expect = 7.978e-27
Identity = 64/137 (46.72%), Postives = 84/137 (61.31%), Query Frame = 3
Query:  183 PSSLTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLAPRTAAY 590
            P S    +     EL   A  + +PG+GILA DES  +  KRL+ IG+ENTE NR+ YR +L +A   + + I G I F ETLYQ   +G   V  + E+ I+ GIKVDKG+VPLAG++ E+  QGLDGL  R A Y
Sbjct:    2 PHSYPALSAEQKKELSDIALRIVAPGKGILAADESVGSMAKRLSQIGVENTEENRRLYRQVLFSADDRVKKCIGGVIFFHETLYQKDDNGVPFVRTIQEKGILVGIKVDKGVVPLAGTDGETTTQGLDGLLERCAQY 138          

HSP 2 Score: 27.335 bits (59), Expect = 7.978e-27
Identity = 21/60 (35.00%), Postives = 25/60 (41.67%), Query Frame = 2
Query:  593 QQGARFRKWRTVVNIPMAHLPWKSRKPPG--------VLPAMLAFGLDNGLVPIGEAEIL 748
            + GA F KWR V+ I         R P          VL    +    NG+VPI E EIL
Sbjct:  140 KDGADFAKWRCVLKI-------SDRTPSALAILENANVLARYASICQQNGIVPIVEPEIL 192          
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALDOC_MOUSE (Fructose-bisphosphate aldolase C OS=Mus musculus GN=Aldoc PE=1 SV=4)

HSP 1 Score: 113.62 bits (283), Expect = 1.759e-26
Identity = 63/137 (45.99%), Postives = 84/137 (61.31%), Query Frame = 3
Query:  183 PSSLTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLAPRTAAY 590
            P S    +     EL   A  + +PG+GILA DES  +  KRL+ IG+ENTE NR+ YR +L +A   + + I G I F ETLYQ   +G   V  + ++ I+ GIKVDKG+VPLAG++ E+  QGLDGL  R A Y
Sbjct:    2 PHSYPALSAEQKKELSDIALRIVTPGKGILAADESVGSMAKRLSQIGVENTEENRRLYRQVLFSADDRVKKCIGGVIFFHETLYQKDDNGVPFVRTIQDKGILVGIKVDKGVVPLAGTDGETTTQGLDGLLERCAQY 138          

HSP 2 Score: 27.335 bits (59), Expect = 1.759e-26
Identity = 21/60 (35.00%), Postives = 25/60 (41.67%), Query Frame = 2
Query:  593 QQGARFRKWRTVVNIPMAHLPWKSRKPPG--------VLPAMLAFGLDNGLVPIGEAEIL 748
            + GA F KWR V+ I         R P          VL    +    NG+VPI E EIL
Sbjct:  140 KDGADFAKWRCVLKI-------SDRTPSALAILENANVLARYASICQQNGIVPIVEPEIL 192          
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALDOB_SPAAU (Fructose-bisphosphate aldolase B OS=Sparus aurata GN=aldob PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 6.574e-26
Identity = 59/124 (47.58%), Postives = 79/124 (63.71%), Query Frame = 3
Query:  222 ELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLV-TAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLAPRTAAY 590
            EL   A+ + +PG+GILA DES  T GKR  +I +EN E NR+ +R +L  T   +   + G I F ETLYQ +++GK    V+ E+ IV GIKVDKG  PL G++ E+  QGLDGL+ R A Y
Sbjct:   15 ELSDIAQRIVAPGKGILAADESTGTMGKRFQNINVENIEENRRCFRDILFSTDASIANCVGGIIFFHETLYQKSSNGKLFPQVVKEKGIVVGIKVDKGTAPLMGTDKETTTQGLDGLSERCAQY 138          

HSP 2 Score: 25.7942 bits (55), Expect = 6.574e-26
Identity = 21/56 (37.50%), Postives = 25/56 (44.64%), Query Frame = 2
Query:  593 QQGARFRKWRTVVNI----PMAHLPWKSRKPPGVLPAMLAFGLDNGLVPIGEAEIL 748
            + G  F KWR V+ I    P A       +   VL    +    NGLVPI E EIL
Sbjct:  140 KDGCDFAKWRCVLKISDGCPFA---LAIAENANVLARYASICQMNGLVPIVEPEIL 192          
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALDOB_RAT (Fructose-bisphosphate aldolase B OS=Rattus norvegicus GN=Aldob PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 6.574e-26
Identity = 62/124 (50.00%), Postives = 81/124 (65.32%), Query Frame = 3
Query:  222 ELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLAPRTAAY 590
            EL + A+ + + G+GILA DES  T G RL  I +ENTE NR+ +R LL +    + Q I G ILF ETLYQ  + GK   ++L E+ IV GIK+D+G  PLAG+N E+  QGLDGL+ R A Y
Sbjct:   15 ELSEIAQRIVANGKGILAADESVGTMGNRLQRIKVENTEENRRQFRELLFSVDNSISQSIGGVILFHETLYQKDSQGKLFRNILKEKGIVVGIKLDQGGAPLAGTNKETTIQGLDGLSERCAQY 138          

HSP 2 Score: 25.7942 bits (55), Expect = 6.574e-26
Identity = 17/53 (32.08%), Postives = 23/53 (43.40%), Query Frame = 2
Query:  593 QQGARFRKWRTVVNIP-MAHLPWKSRKPPGVLPAMLAFGLDNGLVPIGEAEIL 748
            + G  F KWR V+ I          ++    L    +    NGLVPI E E+L
Sbjct:  140 KDGVDFGKWRAVLRISDQCPSSLAIQENANALARYASICQQNGLVPIVEPEVL 192          
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALF_TRYBB (Fructose-bisphosphate aldolase, glycosomal OS=Trypanosoma brucei brucei GN=ALD PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 6.633e-26
Identity = 60/128 (46.88%), Postives = 77/128 (60.16%), Query Frame = 3
Query:  213 YADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLA-GSNDESWCQGLDGLAPRTAAYY 593
            Y  EL++TAK + +PG+G+LA DES  +C KR A IGL NT  +R+ YR L++   G  QYISG IL +ET+YQ    G+     L  + +VPGIK D GL PL  G+  E    GLDG   R   YY
Sbjct:   22 YEAELIETAKKMTAPGKGLLAADESTGSCSKRFAGIGLSNTAEHRRQYRALMLECEGFEQYISGVILHDETVYQKAKTGETFPQYLRRRGVVPGIKTDCGLEPLVEGAKGEQMTAGLDGYIKRAKKYY 149          
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALDOB_RABIT (Fructose-bisphosphate aldolase B OS=Oryctolagus cuniculus GN=ALDOB PE=1 SV=3)

HSP 1 Score: 113.235 bits (282), Expect = 1.114e-25
Identity = 62/124 (50.00%), Postives = 80/124 (64.52%), Query Frame = 3
Query:  222 ELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLAPRTAAY 590
            EL   A+ + + G+GILA DES  T G RL  I +ENTE NR+ +R +L T    + Q I G ILF ETLYQ  + GK   ++L E+ IV GIK+D+G  PLAG+N E+  QGLDGL+ R A Y
Sbjct:   15 ELSDIAQRIVANGKGILAADESVGTMGNRLQRIKVENTEENRRQFREILFTVDNSINQSIGGVILFHETLYQKDSQGKLFRNILKEKGIVVGIKLDQGGAPLAGTNKETTIQGLDGLSERCAQY 138          

HSP 2 Score: 25.0238 bits (53), Expect = 1.114e-25
Identity = 16/53 (30.19%), Postives = 23/53 (43.40%), Query Frame = 2
Query:  593 QQGARFRKWRTVVNIP-MAHLPWKSRKPPGVLPAMLAFGLDNGLVPIGEAEIL 748
            + G  F KWR V+ I          ++    L    +    NGLVPI E E++
Sbjct:  140 KDGVDFGKWRAVLRIADQCPSSLAIQENANTLARYASICQQNGLVPIVEPEVI 192          
BLAST of EY660117 vs. ExPASy Swiss-Prot
Match: ALDOB_PONAB (Fructose-bisphosphate aldolase B OS=Pongo abelii GN=ALDOB PE=2 SV=3)

HSP 1 Score: 113.235 bits (282), Expect = 1.114e-25
Identity = 61/124 (49.19%), Postives = 82/124 (66.13%), Query Frame = 3
Query:  222 ELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLAPRTAAY 590
            EL + A+++ + G+GILA DES  T G RL  I +ENTE NR+ +R +L +    + Q I G ILF ETLYQ  + GK   ++L E+ IV GIK+D+G  PLAG+N E+  QGLDGL+ R A Y
Sbjct:   15 ELSEIAQSIVANGKGILAADESVGTMGNRLQRIKVENTEENRRQFREILFSVDSSINQSIGGVILFHETLYQKDSQGKLFRNILKEKGIVVGIKLDQGGAPLAGTNKETTIQGLDGLSERCAQY 138          

HSP 2 Score: 25.0238 bits (53), Expect = 1.114e-25
Identity = 16/53 (30.19%), Postives = 23/53 (43.40%), Query Frame = 2
Query:  593 QQGARFRKWRTVVNIP-MAHLPWKSRKPPGVLPAMLAFGLDNGLVPIGEAEIL 748
            + G  F KWR V+ I          ++    L    +    NGLVPI E E++
Sbjct:  140 KDGVDFGKWRAVLRIADQCPSSLAIQENANALARYASICQQNGLVPIVEPEVI 192          
The following BLAST results are available for this feature:
BLAST of EY660117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALDOC_PANTR2.778e-2745.99Fructose-bisphosphate aldolase C OS=Pan troglodyte... [more]
ALDOC_MACFA4.708e-2746.72Fructose-bisphosphate aldolase C OS=Macaca fascicu... [more]
ALDOC_HUMAN4.708e-2746.72Fructose-bisphosphate aldolase C OS=Homo sapiens G... [more]
ALDOC_RAT7.978e-2746.72Fructose-bisphosphate aldolase C OS=Rattus norvegi... [more]
ALDOC_MOUSE1.759e-2645.99Fructose-bisphosphate aldolase C OS=Mus musculus G... [more]
ALDOB_SPAAU6.574e-2647.58Fructose-bisphosphate aldolase B OS=Sparus aurata ... [more]
ALDOB_RAT6.574e-2650.00Fructose-bisphosphate aldolase B OS=Rattus norvegi... [more]
ALF_TRYBB6.633e-2646.88Fructose-bisphosphate aldolase, glycosomal OS=Tryp... [more]
ALDOB_RABIT1.114e-2550.00Fructose-bisphosphate aldolase B OS=Oryctolagus cu... [more]
ALDOB_PONAB1.114e-2549.19Fructose-bisphosphate aldolase B OS=Pongo abelii G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-018-G01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660117 ID=EY660117; Name=EY660117; organism=Citrus sinensis; type=EST; length=935bp
CCACGCGTCCGCGGACGCGTGTGCCAGCTCAGAACCCACAGCAAGAAGAA
GCAAAGAGGAAAATGGCCTCAGCCTCGGCATCTTTACTCAAGTCATCATC
CCCCGTTCTTGACAAGTCTGAGTGGGTTAAGGGCCAGGCCATCCGCCAGT
CTACTGTCTCAGTCCGCAGCCTCCCCAGTGGCCCCTCTTCCCTCACCATC
CGTGCTGGTTCCTATGCCGATGAGCTTGTCAAGACCGCGAAAACTGTTGC
ATCACCAGGACGTGGAATTTTGGCCATGGATGAGTCAAATGCAACTTGTG
GAAAACGCCTTGCCTCAATTGGGTTAGAGAACACTGAGGCTAACCGCCAG
GCATACCGTACCCTCCTTGTTACAGCCCCTGGTCTTGGACAGTACATCTC
TGGTGCCATCCTTTTTGAGGAGACTCTCTACCAATCCACCACCGATGGCA
AGAAGATGGTCGATGTTCTTGTTGAGCAAAACATTGTCCCCGGTATCAAA
GTCGACAAGGGTTTGGTGCCCCTTGCTGGTTCCAATGATGAGTCATGGTG
CCAGGGTCTTGATGGCCTGGCTCCTCGCACTGCTGCTTACTACAACAGGG
AGCTCGTTTCCGCAAATGGCGTACTGTTGTGAACATCCCCATGGCCCATC
TGCCTTGGAAGTCAAGGAAGCCGCCTGGGGTCCTGCCCGCTATGCTGGCA
TTTGGTCTAGACAACGGATTGGTCCCAATTGGGGAAGCAGAAATCCTTGT
TTGAGGGGGAACATGGAATTGACAGGACTTTTGAAAAAACTAAAAGGGTT
GGGGCTGAAAGTTTCTCTACCTTGCTGAGACAATGCCAGGTTTGAGGGAT
TTCCCTCCAACCAAACTGGGCACCCCGGGGGCGGAAGGAAGGAAAAGCCC
CCCCAACAGGTGTCAGGACACCCTAAACTCCTCAA
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