EY660115

Overview
NameEY660115
Unique NameEY660115
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660115 vs. ExPASy Swiss-Prot
Match: PSAF_ODOSI (Photosystem I reaction center subunit III OS=Odontella sinensis GN=psaF PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.132e-30
Identity = 70/156 (44.87%), Postives = 95/156 (60.90%), Query Frame = 2
Query:   68 ATAYITGLTPCKESKQFAKREKHQLKKLKTSLKLYAPDSAPALAIKATMEKTKRGCDNYGKNGLLCGSDGLPDLIVSGDQRHWGEFITPGLLFLCIAGWIGRVGKSYLIAISGDKKPAMKEIISDDRLASRLVYRGMSWTVAAYKEMINGELVVKD 535
            A A I GLT C ES  F KR K  +KKL+  +  Y   S PALA++  +E+T+   D Y ++ LLCG+DGLP LI  G   H  EFI PG  F+ I+GWIG VG+ YL A+S  K P   EII +  LA +++  G  W ++A++E I+ +LV  D
Sbjct:   22 ALADIGGLTKCSESPAFEKRLKASVKKLEQRMGKYEAGSPPALALQQQIERTQARFDKYSRSELLCGTDGLPHLIADGRWSHAAEFILPGFGFIYISGWIGWVGRKYLRAVSTTKNPTESEIIINVPLALKIMTTGYIWPISAWQEFISNDLVALD 177          
BLAST of EY660115 vs. ExPASy Swiss-Prot
Match: PSAF_CYACA (Photosystem I reaction center subunit III OS=Cyanidium caldarium GN=psaF PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.713e-29
Identity = 69/158 (43.67%), Postives = 91/158 (57.59%), Query Frame = 2
Query:   62 SVATAYITGLTPCKESKQFAKREKHQLKKLKTSLKLYAPDSAPALAIKATMEKTKRGCDNYGKNGLLCGSDGLPDLIVSGDQRHWGEFITPGLLFLCIAGWIGRVGKSYLIAISGDKKPAMKEIISDDRLASRLVYRGMSWTVAAYKEMINGELVVKD 535
            ++AT + + LTPC+ S QF  R  + +KKL+  L  Y  +S    +IK  +EKTK   D Y K+ LLCG DGLP LI  GD +H GEF  P +LF+ IAGWIG  GK YL       KP   EII D   A + ++ G +W + A KE  NG L+  +
Sbjct:   23 NIAT-HASTLTPCENSAQFQARLNNNIKKLENKLTYYKQNSQEYTSIKQQIEKTKIRFDKYAKSSLLCGEDGLPHLITDGDWQHSGEFFIPSVLFIYIAGWIGWAGKGYLQYSKTLTKPNENEIIIDLPRALKYMFSGFAWPILALKEFKNGSLLASN 179          
BLAST of EY660115 vs. ExPASy Swiss-Prot
Match: PSAF_SYNP6 (Photosystem I reaction center subunit III OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=psaF PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.274e-23
Identity = 66/155 (42.58%), Postives = 85/155 (54.84%), Query Frame = 2
Query:   68 ATAYITGLTPCKESKQFAKREKHQLKKLKTSLKLYAPDSAPALAIKATMEKTKRGCDNYGKNGLLCGSDGLPDLIVSGDQRHWGEFITPGLLFLCIAGWIGRVGKSYLIAISGDKKPAMKEIISDDRLASRLVYRGMSWTVAAYKEMINGELVVK 532
            A+A + GLTPC ES +F +R                       A  A   + K   +NY +   LCG+DGLP LIV G   H G+FI P LLFL IAGWIG VG+SYL AI  DK  A KEI+ D  LA +    G +W +AA++E  +G+L+ K
Sbjct:   21 ASADVAGLTPCSESPRFIQR-----------------------AEAAATPQAKARFENYSQ--ALCGADGLPHLIVDGRLDHAGDFIIPSLLFLYIAGWIGWVGRSYLQAIKSDKDAAGKEIVIDVPLAVKFSLTGFAWPLAAFQEFSSGKLLAK 150          
BLAST of EY660115 vs. ExPASy Swiss-Prot
Match: PSAF_THEEB (Photosystem I reaction center subunit III OS=Thermosynechococcus elongatus (strain BP-1) GN=psaF PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.992e-22
Identity = 61/157 (38.85%), Postives = 85/157 (54.14%), Query Frame = 2
Query:   65 VATAYITGLTPCKESKQFAKREKHQLKKLKTSLKLYAPDSAPALAIKATMEKTKRGCDNYGKNGLLCGSDGLPDLIVSGDQRHWGEFITPGLLFLCIAGWIGRVGKSYLIAISGDKKPAMKEIISDDRLASRLVYRGMSWTVAAYKEMINGELVVKD 535
            +A+A + GL PCK+S  F KR                  +A A+   A     ++  + Y +   LCG DGLP L+V G     G+F+ P +LFL IAGWIG VG++YLIA+    +   KEII D  LA + +  G +W +AA KE+ +GEL  KD
Sbjct:   20 LASADVAGLVPCKDSPAFQKR------------------AAAAVNTTADPASGQKRFERYSQ--ALCGEDGLPHLVVDGRLSRAGDFLIPSVLFLYIAGWIGWVGRAYLIAVRNSGEANEKEIIIDVPLAIKCMLTGFAWPLAALKELASGELTAKD 156          
BLAST of EY660115 vs. ExPASy Swiss-Prot
Match: PSAF_SYNEN (Photosystem I reaction center subunit III OS=Synechococcus elongatus naegeli GN=psaF PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.992e-22
Identity = 61/157 (38.85%), Postives = 85/157 (54.14%), Query Frame = 2
Query:   65 VATAYITGLTPCKESKQFAKREKHQLKKLKTSLKLYAPDSAPALAIKATMEKTKRGCDNYGKNGLLCGSDGLPDLIVSGDQRHWGEFITPGLLFLCIAGWIGRVGKSYLIAISGDKKPAMKEIISDDRLASRLVYRGMSWTVAAYKEMINGELVVKD 535
            +A+A + GL PCK+S  F KR                  +A A+   A     ++  + Y +   LCG DGLP L+V G     G+F+ P +LFL IAGWIG VG++YLIA+    +   KEII D  LA + +  G +W +AA KE+ +GEL  KD
Sbjct:   20 LASADVAGLVPCKDSPAFQKR------------------AAAAVNTTADPASGQKRFERYSQ--ALCGEDGLPHLVVDGRLSRAGDFLIPSVLFLYIAGWIGWVGRAYLIAVRNSGEANEKEIIIDVPLAIKCMLTGFAWPLAALKELASGELTAKD 156          
BLAST of EY660115 vs. ExPASy Swiss-Prot
Match: PSAF_SYNY3 (Photosystem I reaction center subunit III OS=Synechocystis sp. (strain PCC 6803) GN=psaF PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.750e-18
Identity = 59/164 (35.98%), Postives = 83/164 (50.61%), Query Frame = 2
Query:   44 FCYQPHSVATAYITGLTPCKESKQFAKREKHQLKKLKTSLKLYAPDSAPALAIKATMEKTKRGCDNYGKNGLLCGSDGLPDLIVSGDQRHWGEFITPGLLFLCIAGWIGRVGKSYLIAISGDKKPAMKEIISDDRLASRLVYRGMSWTVAAYKEMINGELVVKD 535
            F + P + A  +   LTPC E+  +  + K+ L           P+S    A            + Y     LCG +G P LIV G   H G+F+ P +LFL IAGWIG VG+SYLI I   K P M+E++ +  LA + +  G  W +AA  E  +G+LV+KD
Sbjct:   15 FNFAPSASADDF-ANLTPCSENPAYLAKSKNFLNTTND------PNSGKIRA------------ERYAS--ALCGPEGYPHLIVDGRFTHAGDFLIPSILFLYIAGWIGWVGRSYLIEIRESKNPEMQEVVINVPLAIKKMLGGFLWPLAAVGEYTSGKLVMKD 157          
BLAST of EY660115 vs. ExPASy Swiss-Prot
Match: PSAF_ANAVT (Photosystem I reaction center subunit III OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=psaF PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.971e-17
Identity = 57/156 (36.54%), Postives = 76/156 (48.72%), Query Frame = 2
Query:   68 ATAYITGLTPCKESKQFAKREKHQLKKLKTSLKLYAPDSAPALAIKATMEKTKRGCDNYGKNGLLCGSDGLPDLIVSGDQRHWGEFITPGLLFLCIAGWIGRVGKSYLIAISGDKKPAMKEIISDDRLASRLVYRGMSWTVAAYKEMINGELVVKD 535
            A A    LTPC E+  F    K+                  A    A  +  ++  + Y +   LCG +G P LIV G     G+F+ P +LFL IAGWIG VG++YL AI  D     KEI  D  LA  ++  G +W  AA KE+++GEL  KD
Sbjct:   21 AKALGADLTPCAENPAFQALAKN------------------ARNTTADPQSGQKRFERYSQ--ALCGPEGYPHLIVDGRLDRAGDFLIPSILFLYIAGWIGWVGRAYLQAIKKDSDTEQKEIQLDLGLALPIIATGFAWPAAAVKELLSGELTAKD 156          
BLAST of EY660115 vs. ExPASy Swiss-Prot
Match: PSAF_ANASP (Photosystem I reaction center subunit III OS=Anabaena sp. (strain PCC 7120) GN=psaF PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.773e-17
Identity = 56/156 (35.90%), Postives = 76/156 (48.72%), Query Frame = 2
Query:   68 ATAYITGLTPCKESKQFAKREKHQLKKLKTSLKLYAPDSAPALAIKATMEKTKRGCDNYGKNGLLCGSDGLPDLIVSGDQRHWGEFITPGLLFLCIAGWIGRVGKSYLIAISGDKKPAMKEIISDDRLASRLVYRGMSWTVAAYKEMINGELVVKD 535
            A A    LTPC E+  F    K+                  A    A  +  ++  + Y +   LCG +G P LIV G     G+F+ P +LFL IAGWIG VG++YL AI  D     KEI  D  +A  ++  G +W  AA KE+++GEL  KD
Sbjct:   21 AKALGADLTPCAENPAFQALAKN------------------ARNTTADPQSGQKRFERYSQ--ALCGPEGYPHLIVDGRLDRAGDFLIPSILFLYIAGWIGWVGRAYLQAIKKDSDTEQKEIQLDLGIALPIIATGFAWPAAAVKELLSGELTAKD 156          
BLAST of EY660115 vs. ExPASy Swiss-Prot
Match: PSAF_MASLA (Photosystem I reaction center subunit III OS=Mastigocladus laminosus GN=psaF PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.733e-16
Identity = 57/157 (36.31%), Postives = 75/157 (47.77%), Query Frame = 2
Query:   68 ATAYITGLTPCKESKQFAKREKHQLKKLKTSLKLYAPDSAPALAIKATMEKTKRGCDNYGKNGLLCGSDGLPDLIVSGDQRHWGEFITPGLLFLCIAGWIGRVGKSYLIAISGD-KKPAMKEIISDDRLASRLVYRGMSWTVAAYKEMINGELVVKD 535
            A A    L PC ES  F +R +                   A    A  E  K+  + Y +   LCG +GLP LIV G   H G+F+ P +LFL IAGWIG VG++YL  I         KEI  +  +A  ++  G +W  AA KE ++GEL  KD
Sbjct:   21 AQALGADLVPCSESPAFQQRAQ------------------VARNTTADPESGKKRFERYSQ--ALCGPEGLPHLIVDGRLDHAGDFLIPSILFLYIAGWIGWVGRAYLQTIKKQGSNVEQKEIQIELPIALPIMLSGFAWPAAAIKEFLSGELTAKD 157          
BLAST of EY660115 vs. ExPASy Swiss-Prot
Match: PSAF_PROMA (Photosystem I reaction center subunit III OS=Prochlorococcus marinus GN=psaF PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.560e-12
Identity = 44/122 (36.07%), Postives = 64/122 (52.46%), Query Frame = 2
Query:  197 AIKATMEKTKRGCDNYGKNGLLCGSDGLPDLIVSG---------DQRHWGEFITPGLLFLCIAGWIGRVGKSYLIAISGDKKPAMKEIISDDRLASRLVYRGMSWTVAAYKEMINGELVVKD 535
            A +AT  K     + Y K    CG DGLP L+++          ++ H G+ + PG +F+ +AG IG  G+ YL A    K PA  EII D  LA + + +G +W V A K+  +G+L  KD
Sbjct:   55 ASQATTPKDIARFERYSKAS--CGDDGLPHLVIAATIEPWGALANRHHEGDILIPGHIFIYVAGIIGWSGREYLRASKKTKNPAENEIIIDFALARQCLIKGAAWPVEANKQGRSGDLREKD 174          
The following BLAST results are available for this feature:
BLAST of EY660115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
PSAF_ODOSI3.132e-3044.87Photosystem I reaction center subunit III OS=Odont... [more]
PSAF_CYACA7.713e-2943.67Photosystem I reaction center subunit III OS=Cyani... [more]
PSAF_SYNP61.274e-2342.58Photosystem I reaction center subunit III OS=Synec... [more]
PSAF_THEEB6.992e-2238.85Photosystem I reaction center subunit III OS=Therm... [more]
PSAF_SYNEN6.992e-2238.85Photosystem I reaction center subunit III OS=Synec... [more]
PSAF_SYNY32.750e-1835.98Photosystem I reaction center subunit III OS=Synec... [more]
PSAF_ANAVT3.971e-1736.54Photosystem I reaction center subunit III OS=Anaba... [more]
PSAF_ANASP6.773e-1735.90Photosystem I reaction center subunit III OS=Anaba... [more]
PSAF_MASLA5.733e-1636.31Photosystem I reaction center subunit III OS=Masti... [more]
PSAF_PROMA6.560e-1236.07Photosystem I reaction center subunit III OS=Proch... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-018-F11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660115 ID=EY660115; Name=EY660115; organism=Citrus sinensis; type=EST; length=885bp
CCACGCGTCCGGGGTTTCTCTCCACCCCTTGAACTTTCCTCAATTCTGCT
ATCAACCCCACAGCGTCGCAACTGCCTACATCACCGGCCTCACCCCATGC
AAAGAGTCCAAACAATTCGCCAAGCGCGAGAAGCATCAGCTCAAGAAGCT
CAAGACTTCACTAAAACTGTACGCTCCCGACAGCGCCCCGGCTCTCGCAA
TCAAAGCCACCATGGAGAAGACGAAACGGGGGTGTGACAACTACGGGAAG
AACGGGTTGCTGTGCGGGTCAGATGGGTTGCCGGATCTGATTGTGAGCGG
AGACCAGAGGCACTGGGGTGAGTTTATCACTCCGGGGCTGTTGTTTTTGT
GCATAGCTGGATGGATCGGGCGGGTTGGCAAGAGCTACTTGATCGCCATT
AGTGGCGACAAGAAGCCGGCCATGAAGGAGATCATCAGTGATGATCGTTT
GGCTTCCAGGTTGGTCTACAGAGGTATGAGCTGGACTGTTGCTGCTTACA
AAGAGATGATTAATGGTGAACTTGTTGTCAAGGACCGTTTGTCATTCTAT
CTATTACGATCTCCTCTGGTAATCACAATTTGTTTGTTGTAATTATACAT
TCCCATTATTATTATGTGACATGTGTTGGTGCTGACTTGACTGTGTAATC
GAGGCCGGGTGATTTATCATGGAATTATCAATTACGGATGCACTTGGATA
AAAACAATAAAAAAGGCGGGCGATCTAGAAGAACCAACCTTACAACGCCC
GCATGCCACCTCATACCTCTCTTATACTGCCCCCTAATTCAATTAACTGG
ACGGCCATTTTATCATGCCAGACTGGCAAAACACTCGCGTACGCACTTCA
AAGCCTACATGACTTCCCCCTTGCCCGCTCGGCCA
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