EY660106

Overview
NameEY660106
Unique NameEY660106
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660106 vs. ExPASy Swiss-Prot
Match: MTAD_METKA (5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Methanopyrus kandleri GN=mtaD PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.328e-15
Identity = 42/140 (30.00%), Postives = 72/140 (51.43%), Query Frame = 2
Query:   77 RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGE 496
            RV  + G+ + +D   +   + + L++     D+I   +  +++PG +NTH H    L +G+ADD+ LM WL + IWP E  +  E       L  +E + SG TC A+     +  +A+A   +G+RA +    +D GE
Sbjct:   15 RVIEDAGILIDEDGRISFVDTREQLEECEDWEDEIELGEKDVIMPGLINTHTHGPMTLFRGVADDMPLMKWLREEIWPLEERLDAEKCRWGAALAAMEALKSGTTCLADM-YFFMDAVAEAYAEVGIRAVISHGMIDLGE 153          
BLAST of EY660106 vs. ExPASy Swiss-Prot
Match: MTAD_PYRHO (5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Pyrococcus horikoshii GN=mtaD PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 6.773e-15
Identity = 36/115 (31.30%), Postives = 68/115 (59.13%), Query Frame = 2
Query:  143 DILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMD 487
            ++ +  ++ AD++ID    +++P F+N H H+   + +G+A+DV LM WL + IWP E  +  ++ Y    L  +E++HSG++ F +    ++ E+A+A   +GLR  L    +D
Sbjct:   32 EVKRNINKAADEVIDASHSLIIPAFINAHTHSPMVIFRGLAEDVPLMDWLQNYIWPAERKLKRKEVYWGAKLALLEMVHSGISTFVDM-YFYMEEVARATLEVGLRGFLGYGMVD 145          
BLAST of EY660106 vs. ExPASy Swiss-Prot
Match: MTAD_BACHD (5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Bacillus halodurans GN=mtaD PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 6.773e-15
Identity = 47/155 (30.32%), Postives = 83/155 (53.55%), Query Frame = 2
Query:   35 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMD-CGE 496
            I+ N  IVT   E+   R+G        I ++ +     ++  ++  ++ID + + ++PG +NTH H    L +G +DD+ L +WL +++WP+E  M  E  + +  L   E+I SG T F E    ++ ++A+AV   G RA L++S +  C E
Sbjct:    4 IVKNVSIVTGQAEAPFIRHGYFKFADGVIVSVAEGTPSPEEIDRV--EVIDGKGKWVMPGMINTHGHLGMSLLRGHSDDLPLQSWLTEKMWPFEGKMDREAVHHARQLAMAEMIKSGTTTFLEMYHLYMDDLAEAVVEQGPRAVLMRSMIGLCSE 156          
BLAST of EY660106 vs. ExPASy Swiss-Prot
Match: MTAD_METTP (5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=mtaD PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.509e-14
Identity = 41/134 (30.60%), Postives = 72/134 (53.73%), Query Frame = 2
Query:   68 KESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACL 469
            + + + RNG +    D +    + +++ +      D+IID ++ + +PG VN+H H +  L +G ADD++L+ WL ++IWP E+ +   D      L  +ELI  GVTC+ +     + E A A   +G+R  L
Sbjct:    4 RSASIIRNGSLLKNIDILIEGNRISEVGRDLRPNDDEIIDARNMLAVPGLVNSHTHLAMTLLRGYADDMELIPWLQEKIWPLEARLKPSDVRAGVKLGCLELIRFGVTCYNDM-YYFMDETAAATREMGIRGVL 136          
BLAST of EY660106 vs. ExPASy Swiss-Prot
Match: MTAD_NATPD (5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=mtaD PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.362e-14
Identity = 51/142 (35.92%), Postives = 77/142 (54.23%), Query Frame = 2
Query:  173 DQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIR 598
            D+ +D +  +++PG VNTH H +  L +G ADD  L  WL + IWP E+ +T ED    T L  +EL+ +GVT   +   + V E+A AVE  G+RA L    +  G+    + A    ++ +   +EL      AADGR+R
Sbjct:   42 DRTLDAEGCLVVPGLVNTHCHAAMTLLRGYADDKPLDRWLQEDIWPVEAELTPEDIRAGTRLGLVELLKNGVTAVGDMYFE-VPEVAAAVEEAGIRARLGHGIVTVGK--DEADARADFEEGLAVAREL----DGAADGRVR 176          
BLAST of EY660106 vs. ExPASy Swiss-Prot
Match: MTAD_HALMA (5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Haloarcula marismortui GN=mtaD PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.390e-14
Identity = 46/145 (31.72%), Postives = 75/145 (51.72%), Query Frame = 2
Query:  173 DQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWF 607
            D  +D    +++PG VN H H +  L +G+ADD  L  WL + +WP E+ +T +D      L  +E+I SG T  ++   + V E+A AV+  G+RA L  + +  G+   A+         ++   ++  K   AADGR+R  F
Sbjct:   44 DDELDASDGLVIPGLVNAHTHVAMTLLRGLADDKPLDAWLQEDVWPVEAELTADDIRAGAELGLVEMIRSGTTALSDMYFE-VEEIADAVDQAGMRAVLGFTAVTVGKDDEAA------RSDLEESLDVARKLDGAADGRVRTTF 181          
BLAST of EY660106 vs. ExPASy Swiss-Prot
Match: MTAD_DESDA (5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=mtaD PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.390e-14
Identity = 47/145 (32.41%), Postives = 76/145 (52.41%), Query Frame = 2
Query:   35 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACL 469
            ++H A+IVT DKE R+  N  + V    +  +G   +++  +    +   D    +LLPG VN H H++    +G+ADD+ LM WL+ RI+P E  +T E   + +L+   E++ +G T   +        MA A +  GLR CL
Sbjct:    7 LVHAALIVTQDKERRILENASMAVTDGIVADLGPRHEMITCWQPRHEA--DFGRCLLLPGLVNAHTHSAMTFLRGLADDMPLMDWLNKRIFPVEQKLTPEIVRLGSLMGYAEMLRTGTTACVDMYIFEKEAMA-AADQAGLR-CL 147          
BLAST of EY660106 vs. ExPASy Swiss-Prot
Match: MTAD_LAWIP (5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=mtaD PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 5.734e-14
Identity = 40/119 (33.61%), Postives = 66/119 (55.46%), Query Frame = 2
Query:   35 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVT 391
            I+H   IVT +KE  +  NG + +    I A+G   +I   +   A + +DL + +++PG +N H H +    +G+ADD+ LM WL   I+P E ++T E    S+LL   E++ +G T
Sbjct:    8 IIHAHCIVTQNKERVILYNGSLAITSGNIVALGPKEEICSFWD--AKETLDLCNMLVMPGLINAHTHVAMTFFRGLADDLPLMEWLKSYIFPIERHLTPETVRWSSLLGYAEMLRTGTT 124          
BLAST of EY660106 vs. ExPASy Swiss-Prot
Match: MTAD1_SYNAS (5-methylthioadenosine/S-adenosylhomocysteine deaminase 1 OS=Syntrophus aciditrophicus (strain SB) GN=mtaD1 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.489e-14
Identity = 51/154 (33.12%), Postives = 81/154 (52.60%), Query Frame = 2
Query:   29 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYES-NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMD 487
            T+IL   V+   +  +R+  +G + +  D I A+G   +  Q+F+     I+D +  ++LPG VN+H H +    +GIADD+ LM WL + I+P E+ N+  E  Y  +LL   E+I SG T F +       E A+A    G+R  L +   D
Sbjct:    6 TLILGGTVLCLDETMTRI-EDGALAIAGDAIAAVGTEREFRQRFTSR--NIVDGKHSLILPGLVNSHTHAAMTCFRGIADDMALMDWLGNYIFPAEARNVDPELVYWGSLLACAEMIKSGTTTFCDM-YIFEEETARAAREAGMRCLLGEVLFD 155          
BLAST of EY660106 vs. ExPASy Swiss-Prot
Match: MTAD_TERTT (5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=mtaD PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.668e-13
Identity = 57/187 (30.48%), Postives = 94/187 (50.27%), Query Frame = 2
Query:   53 IVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMT-EEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFG 610
            I+ +    R+F++  + + +DRI +I  ++  L+ ++    + I L  Q+L+PG +N H H +  L +G ADD+ L TWL + IWP E+    EE       L   E++ SG TCFA+        +A AV   G+RA L    +D       +WA ++ D+ I   K L  +  + +   I + FG
Sbjct:   16 ILPVVPHQRLFKDCSLLISRDRIHSIVPTSQSLRDYT--VRERISLPGQLLMPGLINCHGHAAMTLLRGFADDMPLETWLKEHIWPVEAQWAGEEFVRDGGELAMAEMLLSGTTCFADM-YFFGEALASAVHKAGMRAQLYFPIVD----FATAWA-QSPDEYI--HKGLKLRDTYRSHPLINVHFG 192          
The following BLAST results are available for this feature:
BLAST of EY660106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
MTAD_METKA2.328e-1530.005-methylthioadenosine/S-adenosylhomocysteine deami... [more]
MTAD_PYRHO6.773e-1531.305-methylthioadenosine/S-adenosylhomocysteine deami... [more]
MTAD_BACHD6.773e-1530.325-methylthioadenosine/S-adenosylhomocysteine deami... [more]
MTAD_METTP1.509e-1430.605-methylthioadenosine/S-adenosylhomocysteine deami... [more]
MTAD_NATPD3.362e-1435.925-methylthioadenosine/S-adenosylhomocysteine deami... [more]
MTAD_HALMA4.390e-1431.725-methylthioadenosine/S-adenosylhomocysteine deami... [more]
MTAD_DESDA4.390e-1432.415-methylthioadenosine/S-adenosylhomocysteine deami... [more]
MTAD_LAWIP5.734e-1433.615-methylthioadenosine/S-adenosylhomocysteine deami... [more]
MTAD1_SYNAS7.489e-1433.125-methylthioadenosine/S-adenosylhomocysteine deami... [more]
MTAD_TERTT1.668e-1330.485-methylthioadenosine/S-adenosylhomocysteine deami... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-018-F02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660106 ID=EY660106; Name=EY660106; organism=Citrus sinensis; type=EST; length=927bp
CCACGCGTCCGGCTTAGGCTCTAGCTCAACGATGATACTTCACAACGCGG
TGATTGTTACAATGGACAAAGAGAGCCGAGTATTTCGAAACGGCGGCGTT
TTCGTCGTACAAGACCGAATCAAAGCCATCGGTCAATCTGCCGATATTCT
CCAACAATTCTCTCAAATGGCCGATCAAATCATCGATCTCCAAAGCCAAA
TCTTACTTCCAGGATTTGTTAACACGCATGTGCACACATCTCAACAACTG
GCGAAGGGGATAGCTGATGACGTTGATTTGATGACATGGTTGCATGATCG
AATTTGGCCTTACGAATCTAACATGACTGAGGAGGATTCTTACATCTCCA
CTTTACTGTGCGGAATTGAACTTATTCACTCTGGTGTAACGTGTTTTGCT
GAAGCTGGAGGGCAGCATGTAAGTGAAATGGCTAAAGCGGTTGAGTTACT
GGGTCTACGTGCATGTTTAGTCCAGTCAACCATGGACTGTGGGGAGGGTT
TACCTGCATCTTGGGCTGTTCGCACTACAGATGATTGTATTCAGTCTCAA
AAGGAGCTTTATGCGAAGCACCATCATGCAGCCGATGGGCGCATCAGAAT
ATGGTTTGGAATTAGACAAATCATGAATGCAACTGATCGCTTGCTACTTG
AAACAGAGACATGGCTAGAGAATTAAAAACAGGAATCACATGCATGNTGC
AGAGATACCCTACGAGAATCAAGTGGTGATGGATACTCGAAAGGTTGATC
ACGGGACTGGTACATTCTTGAACAAGATAAAATCCTGCAGAACACTTGCT
TTCCGCTCATACGTTTGGGGGCACCACACTGAGATTGGTCTCCTCTCAAG
ACTGGGGGCAAAGGATCTCACCTGCCTGGCTCTGCAATGCCAATGCTTGG
TTTTGCCCCATAAGGGAAAGCTTCATG
back to top