EY660099

Overview
NameEY660099
Unique NameEY660099
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660099 vs. ExPASy Swiss-Prot
Match: ALDH2_RAT (Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh2 PE=1 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.640e-74
Identity = 137/230 (59.57%), Postives = 169/230 (73.48%), Query Frame = 2
Query:   14 FPSLDPRTGDVIAHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTRKIVLQLAAKSNLKPVT 700
            FP+++P TG+VI  VAEG  EDV++AV AA+ AF  G PW RM A +R +++ R ADL+ER    +AALET DNGKP+  S   ++ M  +  RYYAGWADK  G T P DG +   T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTGST    ++   A  SNLK VT
Sbjct:   56 FPTVNPSTGEVICQVAEGNKEDVDKAVKAAQAAFQLGSPWRRMDASDRGRLLYRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGSSNLKRVT 285          
BLAST of EY660099 vs. ExPASy Swiss-Prot
Match: ALDH2_MOUSE (Aldehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh2 PE=1 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.640e-74
Identity = 138/230 (60.00%), Postives = 168/230 (73.04%), Query Frame = 2
Query:   14 FPSLDPRTGDVIAHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTRKIVLQLAAKSNLKPVT 700
            FP+++P TG+VI  VAEG  EDV++AV AAR AF  G PW RM A +R +++ R ADL+ER    +AALET DNGKP+  S   ++ M  +  RYYAGWADK  G T P DG +   T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH  VDK+AFTGST    ++   A  SNLK VT
Sbjct:   56 FPTVNPSTGEVICQVAEGNKEDVDKAVKAARAAFQLGSPWRRMDASDRGRLLYRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEGVDKVAFTGSTEVGHLIQVAAGSSNLKRVT 285          
BLAST of EY660099 vs. ExPASy Swiss-Prot
Match: AL1B1_RAT (Aldehyde dehydrogenase X, mitochondrial OS=Rattus norvegicus GN=Aldh1b1 PE=1 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 3.652e-74
Identity = 135/230 (58.70%), Postives = 173/230 (75.22%), Query Frame = 2
Query:   14 FPSLDPRTGDVIAHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTRKIVLQLAAKSNLKPVT 700
            FP+++P TG+VI HVAEG+  DV+ AV AAR+AF  G PW RM A ER +++ R ADL+ER    +A+LET DNGKPF++S   ++    +++RY AGWADK  G T P DG +   T HEP+GV GQIIPWNFPL+M  WK+ PALA GNT+V+K AEQTPLSALY++ L+ EAG PPGV+NI++GYGPTAGAA+A HM+VDK+AFTGST    ++ + A  SNLK VT
Sbjct:   56 FPTVNPTTGEVIGHVAEGDRADVDLAVRAAREAFRLGSPWRRMDASERGRLLNRLADLVERDRVYLASLETLDNGKPFQESYVLDLDEVIKVYRYLAGWADKWHGKTIPMDGEHFCFTRHEPVGVCGQIIPWNFPLVMQGWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQHMDVDKVAFTGSTEVGHLIQKAAGDSNLKRVT 285          
BLAST of EY660099 vs. ExPASy Swiss-Prot
Match: AL1A2_HUMAN (Retinal dehydrogenase 2 OS=Homo sapiens GN=ALDH1A2 PE=1 SV=3)

HSP 1 Score: 275.018 bits (702), Expect = 4.038e-73
Identity = 131/230 (56.96%), Postives = 167/230 (72.61%), Query Frame = 2
Query:   14 FPSLDPRTGDVIAHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTRKIVLQLAAKSNLKPVT 700
            FP  +P TG+ +  V E +  D+++AV AAR AF  G  W RM A ER +++ + ADL+ER    +A +E+ + GKPF Q+   ++    + FRYYAGWADKI G+T P DG Y   T HEPIGV GQIIPWNFPLLMFAWK+ PAL CGNT+V+K AEQTPLSALY+  L+ EAG PPGV+NI+ GYGPTAGAA+ASH+ +DK+AFTGST   K++ + A +SNLK VT
Sbjct:   55 FPVYNPATGEQVCEVQEADKADIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRAVLATMESLNGGKPFLQAFYVDLQGVIKTFRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVINILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVT 284          
BLAST of EY660099 vs. ExPASy Swiss-Prot
Match: ALDH2_HORSE (Aldehyde dehydrogenase, mitochondrial OS=Equus caballus GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 6.888e-73
Identity = 136/230 (59.13%), Postives = 168/230 (73.04%), Query Frame = 2
Query:   14 FPSLDPRTGDVIAHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTRKIVLQLAAKSNLKPVT 700
            FP+++P TG+VI  VA G+ EDV+RAV AAR AF  G PW RM A +R +++ R ADL+ER    +AALET DNGKP+  S   ++ M  +  RYYAGWADK  G T P DG +   T HEP+GV GQIIPWNFPLLM A K+GPALA GN +V+K AEQTPL+ALYV+ L  EAG PPGV+N+V G+GPTAGAA+ASH +VDK+AFTGST    ++   A +SNLK VT
Sbjct:   37 FPTVNPSTGEVICQVAAGDKEDVDRAVKAARAAFQLGSPWRRMDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAAKLGPALATGNVVVMKVAEQTPLTALYVANLTKEAGFPPGVVNVVPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGRSNLKKVT 266          
BLAST of EY660099 vs. ExPASy Swiss-Prot
Match: AL1A2_RAT (Retinal dehydrogenase 2 OS=Rattus norvegicus GN=Aldh1a2 PE=1 SV=2)

HSP 1 Score: 270.396 bits (690), Expect = 9.947e-72
Identity = 129/230 (56.09%), Postives = 165/230 (71.74%), Query Frame = 2
Query:   14 FPSLDPRTGDVIAHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTRKIVLQLAAKSNLKPVT 700
            FP  +P TG+ +  V E +  D+++AV AAR AF  G  W RM A ER +++ + ADL+ER    +A +E+ + GKPF Q+   ++    +  RYYAGWADKI G+T P DG Y   T HEPIGV GQIIPWNFPLLMF WK+ PAL CGNT+V+K AEQTPLSALY+  L+ EAG PPGV+NI+ GYGPTAGAA+ASH+ +DK+AFTGST   K++ + A +SNLK VT
Sbjct:   55 FPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVT 284          
BLAST of EY660099 vs. ExPASy Swiss-Prot
Match: AL1A2_MOUSE (Retinal dehydrogenase 2 OS=Mus musculus GN=Aldh1a2 PE=1 SV=2)

HSP 1 Score: 270.396 bits (690), Expect = 9.947e-72
Identity = 129/230 (56.09%), Postives = 165/230 (71.74%), Query Frame = 2
Query:   14 FPSLDPRTGDVIAHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTRKIVLQLAAKSNLKPVT 700
            FP  +P TG+ +  V E +  D+++AV AAR AF  G  W RM A ER +++ + ADL+ER    +A +E+ + GKPF Q+   ++    +  RYYAGWADKI G+T P DG Y   T HEPIGV GQIIPWNFPLLMF WK+ PAL CGNT+V+K AEQTPLSALY+  L+ EAG PPGV+NI+ GYGPTAGAA+ASH+ +DK+AFTGST   K++ + A +SNLK VT
Sbjct:   55 FPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVT 284          
BLAST of EY660099 vs. ExPASy Swiss-Prot
Match: AL1A1_HORSE (Retinal dehydrogenase 1 OS=Equus caballus GN=ALDH1A1 PE=1 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 2.216e-71
Identity = 129/230 (56.09%), Postives = 169/230 (73.48%), Query Frame = 2
Query:   14 FPSLDPRTGDVIAHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTRKIVLQLAAKSNLKPVT 700
            FP  +P T + +  V EG+ EDVN+AV+AAR+AF  G PW  M A ER +++ + ADL+ER    +A +E+ + GK F  +   ++    +  RY AGWADKIQG T P+DG +   T HEP+GV GQI+PWNFPLLMF WK+ PAL+CGNT+V+K AEQTPLSAL+V+ L+ EAG PPGV+NIV GYGPTAGAA++SHM++DK+AFTGST   K++ + A KSNLK VT
Sbjct:   37 FPVFNPATEEKLCEVEEGDKEDVNKAVAAARQAFQIGSPWRTMDASERGRLLYKLADLVERDRLILATMESMNGGKLFSNAYLMDLGGCLKTLRYCAGWADKIQGRTIPSDGNFFTYTRHEPVGVCGQILPWNFPLLMFLWKIAPALSCGNTVVVKPAEQTPLSALHVATLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVT 266          
BLAST of EY660099 vs. ExPASy Swiss-Prot
Match: AL1A1_RAT (Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Aldh1a1 PE=1 SV=3)

HSP 1 Score: 266.159 bits (679), Expect = 1.876e-70
Identity = 130/230 (56.52%), Postives = 169/230 (73.48%), Query Frame = 2
Query:   14 FPSLDPRTGDVIAHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTRKIVLQLAAKSNLKPVT 700
            FP L+P T +VI HV EG+  DV++AV AAR+AF  G PW  M A ER +++ + ADL+ER    +A +E  + GK F  +  +++  + +  +Y AGWADKI G T P+DG     T  EPIGV GQIIPWNFPLLMF WK+GPAL+CGNT+V+K AEQTPL+AL+++ L+ EAG PPGV+NIV GYGPTAGAA++SHM+VDK+AFTGST   K++ + A KSNLK VT
Sbjct:   38 FPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLMERDRLLLATIEAINGGKVFANAYLSDLGGSIKALKYCAGWADKIHGQTIPSDGDIFTFTRREPIGVCGQIIPWNFPLLMFIWKIGPALSCGNTVVVKPAEQTPLTALHMASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKEAAGKSNLKRVT 267          
BLAST of EY660099 vs. ExPASy Swiss-Prot
Match: AL1A1_MOUSE (Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1 PE=1 SV=5)

HSP 1 Score: 265.774 bits (678), Expect = 2.450e-70
Identity = 129/230 (56.09%), Postives = 168/230 (73.04%), Query Frame = 2
Query:   14 FPSLDPRTGDVIAHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTRKIVLQLAAKSNLKPVT 700
            FP L+P T +VI HV EG+  DV++AV AAR+AF  G PW  M A ER +++ + ADL+ER    +A +E  + GK F  +  +++    +  +Y AGWADKI G T P+DG     T  EPIGV GQIIPWNFP+LMF WK+GPAL+CGNT+V+K AEQTPL+AL+++ L+ EAG PPGV+NIV GYGPTAGAA++SHM+VDK+AFTGST   K++ + A KSNLK VT
Sbjct:   38 FPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLMERDRLLLATMEALNGGKVFANAYLSDLGGCIKALKYCAGWADKIHGQTIPSDGDIFTYTRREPIGVCGQIIPWNFPMLMFIWKIGPALSCGNTVVVKPAEQTPLTALHLASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKEAAGKSNLKRVT 267          
The following BLAST results are available for this feature:
BLAST of EY660099 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ALDH2_RAT1.640e-7459.57Aldehyde dehydrogenase, mitochondrial OS=Rattus no... [more]
ALDH2_MOUSE1.640e-7460.00Aldehyde dehydrogenase, mitochondrial OS=Mus muscu... [more]
AL1B1_RAT3.652e-7458.70Aldehyde dehydrogenase X, mitochondrial OS=Rattus ... [more]
AL1A2_HUMAN4.038e-7356.96Retinal dehydrogenase 2 OS=Homo sapiens GN=ALDH1A2... [more]
ALDH2_HORSE6.888e-7359.13Aldehyde dehydrogenase, mitochondrial OS=Equus cab... [more]
AL1A2_RAT9.947e-7256.09Retinal dehydrogenase 2 OS=Rattus norvegicus GN=Al... [more]
AL1A2_MOUSE9.947e-7256.09Retinal dehydrogenase 2 OS=Mus musculus GN=Aldh1a2... [more]
AL1A1_HORSE2.216e-7156.09Retinal dehydrogenase 1 OS=Equus caballus GN=ALDH1... [more]
AL1A1_RAT1.876e-7056.52Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Al... [more]
AL1A1_MOUSE2.450e-7056.09Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-018-E06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660099 ID=EY660099; Name=EY660099; organism=Citrus sinensis; type=EST; length=903bp
CCACGCGTCCGCGTTTCCCTCATTAGACCCCAGGACTGGTGATGTGATTG
CTCATGTAGCTGAAGGTGAGGCTGAAGACGTCAACCGAGCAGTTTCTGCT
GCTCGCAAGGCATTTGATGAAGGACCGTGGCCTAGGATGACTGCTTATGA
AAGGTCAAAAATAATTTTGCGCTTCGCTGATTTGCTGGAAAGGCATAATG
ATGAAATTGCAGCCCTTGAGACTTGGGATAACGGGAAGCCATTCGAGCAG
TCTGCCCAGACTGAAGTACCAATGACCACGCGTTTATTCCGGTACTACGC
TGGTTGGGCAGATAAGATTCAGGGTCTCACTGCTCCAGCTGATGGACCGT
ACCATGTGCAAACCTTGCACGAACCAATTGGTGTAGCAGGTCAAATTATC
CCATGGAACTTTCCCCTTCTCATGTTTGCTTGGAAAGTTGGGCCTGCATT
AGCATGTGGCAACACTATTGTTCTTAAGACAGCAGAGCAGACTCCCCTCT
CAGCTCTTTATGTATCAAAGCTACTTCATGAGGCTGGACTTCCTCCAGGT
GTTCTAAATATAGTTTCAGGTTATGGTCCAACTGCCGGTGCTGCTCTTGC
TAGTCACATGGAAGTGGATAAGCTTGCTTTCACTGGATCAACCACGACCC
GGAAAATTGTACTTCAATTGGCAGCGAAAAGCAATCTTAAGCCAGTGACA
TTAGAGCTTGGAGGGAATCTCCTTTTATTGTATGTGAAGATGCTGATGTA
AAAAGGCCGCTGAGCTGGCCACTATGCTTTATCTTTAATCAGGACATGCT
GNTGCGCTGGTCTCGTACTTTGGACTGAAGTGTGATGATCATTTGAAAGA
AGCAATGCACTGCATGAAACGGGTTGTGTGATCCGTCAAGGAGGAATCAC
AGG
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