EY660099

Overview
NameEY660099
Unique NameEY660099
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660099 vs. ExPASy Swiss-Prot
Match: AL1A1_HUMAN (Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1 PE=1 SV=2)

HSP 1 Score: 265.388 bits (677), Expect = 3.200e-70
Identity = 127/230 (55.22%), Postives = 167/230 (72.61%), Query Frame = 2
Query:   14 FPSLDPRTGDVIAHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTRKIVLQLAAKSNLKPVT 700
            FP  +P T + +  V EG+ EDV++AV AAR+AF  G PW  M A ER +++ + ADL+ER    +A +E+ + GK +  +   ++    +  RY AGWADKIQG T P DG +   T HEPIGV GQIIPWNFPL+M  WK+GPAL+CGNT+V+K AEQTPL+AL+V+ L+ EAG PPGV+NIV GYGPTAGAA++SHM++DK+AFTGST   K++ + A KSNLK VT
Sbjct:   38 FPVFNPATEEELCQVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGWADKIQGRTIPIDGNFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVT 267          
BLAST of EY660099 vs. ExPASy Swiss-Prot
Match: AL1A2_CHICK (Retinal dehydrogenase 2 OS=Gallus gallus GN=ALDH1A2 PE=2 SV=2)

HSP 1 Score: 265.003 bits (676), Expect = 4.179e-70
Identity = 127/230 (55.22%), Postives = 164/230 (71.30%), Query Frame = 2
Query:   14 FPSLDPRTGDVIAHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTRKIVLQLAAKSNLKPVT 700
            FP  +P TG+ I  + E +  D ++AV AAR AF  G  W RM A ER +++ + ADL+ER    +A +E+ ++GKPF Q+   ++    +  RYYAGWADKI G+T P DG Y   T HEPIGV GQIIPWNFPLLMFAWK+ PAL CGNT+V+K AEQTPLSALY+  L+ EAG PPGV+NI+ G+GP  GAA+ASH+ +DK+AFTGST   K++ + A +SNLK VT
Sbjct:   55 FPVYNPATGEQICEIQEADKVDTDKAVRAARLAFSLGSVWRRMDASERGQLLDKLADLVERDRAVLATMESLNSGKPFLQAFYVDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILPGFGPIVGAAIASHVGIDKIAFTGSTEVGKLIQEAAGRSNLKRVT 284          
BLAST of EY660099 vs. ExPASy Swiss-Prot
Match: AL1A2_TAEGU (Retinal dehydrogenase 2 OS=Taeniopygia guttata GN=ALDH1A2 PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 1.216e-69
Identity = 127/230 (55.22%), Postives = 163/230 (70.87%), Query Frame = 2
Query:   14 FPSLDPRTGDVIAHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTRKIVLQLAAKSNLKPVT 700
            FP  +P TG+ I  + E +  D ++AV AAR AF  G  W RM A ER  ++ + ADL+ER    +A +E+ ++GKPF Q+   ++    +  RYYAGWADKI G+T P DG Y   T HEPIGV GQIIPWNFPLLMFAWK+ PAL CGNT+V+K AEQTPLSALY+  L+ EAG PPGV+NI+ G+GP  GAA+ASH+ +DK+AFTGST   K++ + A +SNLK VT
Sbjct:   55 FPVYNPATGEQICDIQEADKVDTDKAVRAARLAFSLGSVWRRMDASERGHLLDKLADLVERDRAILATMESLNSGKPFLQAFYVDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILPGFGPIVGAAIASHVGIDKIAFTGSTEVGKLIQEAAGRSNLKRVT 284          
BLAST of EY660099 vs. ExPASy Swiss-Prot
Match: AL1A1_MACFA (Retinal dehydrogenase 1 OS=Macaca fascicularis GN=ALDH1A1 PE=2 SV=3)

HSP 1 Score: 263.077 bits (671), Expect = 1.588e-69
Identity = 126/230 (54.78%), Postives = 166/230 (72.17%), Query Frame = 2
Query:   14 FPSLDPRTGDVIAHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTRKIVLQLAAKSNLKPVT 700
            FP  +P T + +  V EG+  DV++AV AAR+AF  G PW  M A ER +++ + ADL+ER    +A +E+ + GK +  +   ++    +  RY AGWADKIQG T P DG +   T HEPIGV GQIIPWNFPL+M  WK+GPAL+CGNT+V+K AEQTPL+AL+V+ L+ EAG PPGV+NIV GYGPTAGAA++SHM++DK+AFTGST   K++ + A KSNLK VT
Sbjct:   38 FPVFNPATEEELCQVEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGWADKIQGRTIPIDGNFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVT 267          
BLAST of EY660099 vs. ExPASy Swiss-Prot
Match: AL1A1_RABIT (Retinal dehydrogenase 1 OS=Oryctolagus cuniculus GN=ALDH1A1 PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 3.538e-69
Identity = 126/230 (54.78%), Postives = 167/230 (72.61%), Query Frame = 2
Query:   14 FPSLDPRTGDVIAHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTRKIVLQLAAKSNLKPVT 700
            FP L+P T + I  + EG+  DV++AV AAR+AF  G PW  M A ER +++ + ADL+ER    +A +E+ + GK F  +   ++    +  RY AGWADKIQG T P DG +   T HEP+GV GQIIPWNFPL+M  WK+GPAL+CGNT+++K AEQTPL+AL+V+ L+ EAG PPGV+NIV GYGPTAGAA++SHM++DK+AFTGST   K++ + A KSNLK VT
Sbjct:   33 FPVLNPATEEQICLIEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLYKLADLIERDRLLLATMESLNAGKLFPNAYLMDLGGCIKTLRYCAGWADKIQGRTMPMDGDFFCYTRHEPVGVCGQIIPWNFPLVMLIWKIGPALSCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVT 262          
BLAST of EY660099 vs. ExPASy Swiss-Prot
Match: AL1A1_BOVIN (Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 PE=2 SV=3)

HSP 1 Score: 261.922 bits (668), Expect = 3.538e-69
Identity = 127/230 (55.22%), Postives = 166/230 (72.17%), Query Frame = 2
Query:   14 FPSLDPRTGDVIAHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTRKIVLQLAAKSNLKPVT 700
            FP  +P T + +  V EG+ EDV++AV AAR+AF  G PW  M A ER +++ + ADL+ER +  +A +E  + GK F  +   ++    +  RY AGWADKIQG T P DG +   T  EP+GV GQIIPWNFPLLMF WK+GPAL+CGNT+V+K AEQTPL+AL++  L+ EAG PPGV+NIV GYGPTAGAA++SHM+VDK+AFTGST   K++ + A KSNLK V+
Sbjct:   38 FPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDHLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVS 267          
BLAST of EY660099 vs. ExPASy Swiss-Prot
Match: AL1A7_MOUSE (Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculus GN=Aldh1a7 PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 4.620e-69
Identity = 125/230 (54.35%), Postives = 169/230 (73.48%), Query Frame = 2
Query:   14 FPSLDPRTGDVIAHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTRKIVLQLAAKSNLKPVT 700
            FP L+P T +VI HV EG+  DV++AV AAR+AF  G PW  M A ER +++ + ADL+ER    +A +E+ + GK F  +   +V ++ +  +Y+AGWADKI G T P+DG     T  EPIGV GQIIPWN PL++F WK+GPAL+CGNT+V+K AEQTPL+AL+++ L+ EAG PPGV+NIV GYGPTAG A++SHM++DK++FTGST   K++ + A KSNLK VT
Sbjct:   38 FPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLMERDRLLLATMESMNAGKVFAHAYLLDVEISIKALQYFAGWADKIHGQTIPSDGNIFTYTRREPIGVCGQIIPWNGPLIIFTWKLGPALSCGNTVVVKPAEQTPLTALHMASLIKEAGFPPGVVNIVPGYGPTAGGAISSHMDIDKVSFTGSTEVGKLIKEAAGKSNLKRVT 267          
BLAST of EY660099 vs. ExPASy Swiss-Prot
Match: AL1A1_SHEEP (Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 PE=1 SV=2)

HSP 1 Score: 261.536 bits (667), Expect = 4.620e-69
Identity = 127/230 (55.22%), Postives = 165/230 (71.74%), Query Frame = 2
Query:   14 FPSLDPRTGDVIAHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTRKIVLQLAAKSNLKPVT 700
            FP  +P T + +  V EG+ EDV++AV AAR+AF  G PW  M A ER +++ + ADL+ER    +A +E  + GK F  +   ++    +  RY AGWADKIQG T P DG +   T  EP+GV GQIIPWNFPLLMF WK+GPAL+CGNT+V+K AEQTPL+AL++  L+ EAG PPGV+NIV GYGPTAGAA++SHM+VDK+AFTGST   K++ + A KSNLK V+
Sbjct:   38 FPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVS 267          
BLAST of EY660099 vs. ExPASy Swiss-Prot
Match: ALDH_EMENI (Aldehyde dehydrogenase OS=Emericella nidulans GN=aldA PE=3 SV=2)

HSP 1 Score: 257.684 bits (657), Expect = 1.125e-68
Identity = 130/229 (56.77%), Postives = 167/229 (72.93%), Query Frame = 2
Query:   14 FPSLDPRTGDVIAHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTRKIVLQLAAKSNLKPVT 700
            F  ++P    VI  V E   +DV+ AV+AAR AF EGPW ++T  ER  +I + ADL+ER  D +AA+E+ DNGK F   A+ ++  +    RYYAGWADKI G T   +      T HEP+GV GQIIPWNFPLLM++WK+GPA+A GNT+VLKTAEQTPLSALY +KL+ EAG P GV+N++SG+G TAGAA++SHM++DK+AFTGST   + +LQ AAKSNLK VT
Sbjct:   36 FQVINPSNEKVITSVHEATEKDVDVAVAAARAAF-EGPWRQVTPSERGILINKLADLMERDIDTLAAIESLDNGKAFTM-AKVDLANSIGCLRYYAGWADKIHGQTIDTNPETLTYTRHEPVGVCGQIIPWNFPLLMWSWKIGPAVAAGNTVVLKTAEQTPLSALYAAKLIKEAGFPAGVINVISGFGRTAGAAISSHMDIDKVAFTGSTLVGRTILQAAAKSNLKKVT 262          

HSP 2 Score: 24.6386 bits (52), Expect = 1.125e-68
Identity = 11/24 (45.83%), Postives = 15/24 (62.50%), Query Frame = 1
Query:  715 ESPFIVCEDADVKRPLSWPLCFIF 786
            +SP IV +DAD+   +SW    IF
Sbjct:  268 KSPNIVFDDADIDNAISWANFGIF 291          
BLAST of EY660099 vs. ExPASy Swiss-Prot
Match: ALDH1_MACPR (Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelides proboscideus GN=ALDH1 PE=2 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 8.714e-68
Identity = 127/230 (55.22%), Postives = 165/230 (71.74%), Query Frame = 2
Query:   14 FPSLDPRTGDVIAHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTRKIVLQLAAKSNLKPVT 700
            FP  +P T + I  V E + EDV++AV AAR+AF  G PW  M A ER ++I + ADL+ER    +A LE+ + GK F  +   ++    ++ RY AGWADKIQG T P DG +   T HEPIGV GQI PWN P+++ A K+GPAL CGNT+++K AEQTPL+AL+V+ L+ EAG PPGV+NIV GYGPTAGAA++SHM+VDK+AFTGST   K++ + AAKSNLK VT
Sbjct:   38 FPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQMGSPWRTMDASERGQLIYKLADLIERDRLLLATLESINAGKIFASAYLMDLDYCIKVLRYCAGWADKIQGRTIPVDGEFFSYTRHEPIGVCGQIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQEAAAKSNLKRVT 267          
The following BLAST results are available for this feature:
BLAST of EY660099 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AL1A1_HUMAN3.200e-7055.22Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1... [more]
AL1A2_CHICK4.179e-7055.22Retinal dehydrogenase 2 OS=Gallus gallus GN=ALDH1A... [more]
AL1A2_TAEGU1.216e-6955.22Retinal dehydrogenase 2 OS=Taeniopygia guttata GN=... [more]
AL1A1_MACFA1.588e-6954.78Retinal dehydrogenase 1 OS=Macaca fascicularis GN=... [more]
AL1A1_RABIT3.538e-6954.78Retinal dehydrogenase 1 OS=Oryctolagus cuniculus G... [more]
AL1A1_BOVIN3.538e-6955.22Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 P... [more]
AL1A7_MOUSE4.620e-6954.35Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculu... [more]
AL1A1_SHEEP4.620e-6955.22Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 P... [more]
ALDH_EMENI1.125e-6856.77Aldehyde dehydrogenase OS=Emericella nidulans GN=a... [more]
ALDH1_MACPR8.714e-6855.22Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelid... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-018-E06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660099 ID=EY660099; Name=EY660099; organism=Citrus sinensis; type=EST; length=903bp
CCACGCGTCCGCGTTTCCCTCATTAGACCCCAGGACTGGTGATGTGATTG
CTCATGTAGCTGAAGGTGAGGCTGAAGACGTCAACCGAGCAGTTTCTGCT
GCTCGCAAGGCATTTGATGAAGGACCGTGGCCTAGGATGACTGCTTATGA
AAGGTCAAAAATAATTTTGCGCTTCGCTGATTTGCTGGAAAGGCATAATG
ATGAAATTGCAGCCCTTGAGACTTGGGATAACGGGAAGCCATTCGAGCAG
TCTGCCCAGACTGAAGTACCAATGACCACGCGTTTATTCCGGTACTACGC
TGGTTGGGCAGATAAGATTCAGGGTCTCACTGCTCCAGCTGATGGACCGT
ACCATGTGCAAACCTTGCACGAACCAATTGGTGTAGCAGGTCAAATTATC
CCATGGAACTTTCCCCTTCTCATGTTTGCTTGGAAAGTTGGGCCTGCATT
AGCATGTGGCAACACTATTGTTCTTAAGACAGCAGAGCAGACTCCCCTCT
CAGCTCTTTATGTATCAAAGCTACTTCATGAGGCTGGACTTCCTCCAGGT
GTTCTAAATATAGTTTCAGGTTATGGTCCAACTGCCGGTGCTGCTCTTGC
TAGTCACATGGAAGTGGATAAGCTTGCTTTCACTGGATCAACCACGACCC
GGAAAATTGTACTTCAATTGGCAGCGAAAAGCAATCTTAAGCCAGTGACA
TTAGAGCTTGGAGGGAATCTCCTTTTATTGTATGTGAAGATGCTGATGTA
AAAAGGCCGCTGAGCTGGCCACTATGCTTTATCTTTAATCAGGACATGCT
GNTGCGCTGGTCTCGTACTTTGGACTGAAGTGTGATGATCATTTGAAAGA
AGCAATGCACTGCATGAAACGGGTTGTGTGATCCGTCAAGGAGGAATCAC
AGG
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