EY660096

Overview
NameEY660096
Unique NameEY660096
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660096 vs. ExPASy Swiss-Prot
Match: PGK_NOSP7 (Phosphoglycerate kinase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=pgk PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.636e-38
Identity = 97/206 (47.09%), Postives = 122/206 (59.22%), Query Frame = 1
Query:  334 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLLKAGSSSWK--REGPQRGRKNESEFARNLPL-WQTLCQ*GFWDRSKSHGSTEGSNKILKPSGGWFPLERELDSLVGGVQPPRGNLCP-CGGSKAPHK 939
            M+KKS+  LS AD+ GK+  VR D NVP+DD   ITDDTRIRAA+PTI+ L Q GAKVIL+SH GRPKGV  K  L P+  RLSELLG +V+K DD IG EV   VA+L        +  R  P+   KN++EFA+ L           F    ++H STEG  K L PS   + +E+EL  L   ++ P+  L    GGSK   K
Sbjct:    1 MSKKSLASLSSADISGKRALVRVDFNVPVDDQGKITDDTRIRAALPTIQDLTQKGAKVILASHFGRPKGVDDKLRLTPVAKRLSELLGQEVIKTDDSIGDEVAAKVAALQNGQVLLLENVRFYPEE-EKNDAEFAKKLAANADFYVNDAFGTAHRAHASTEGVTKFLSPSVAGYLVEKELQYLQNAIENPQRPLAAIIGGSKVSSK 205          
BLAST of EY660096 vs. ExPASy Swiss-Prot
Match: PGK_SYNSC (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9605) GN=pgk PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.807e-37
Identity = 99/208 (47.60%), Postives = 118/208 (56.73%), Query Frame = 1
Query:  334 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLLKAGSSSWKREGPQ---RGRKNESEFARNLP-LWQTLCQ*GFWDRSKSHGSTEGSNKILKPSGGWFPLERELDSLVGGVQPPRGNLCP-CGGSKAPHK 939
            MAK+S+  L+  DL GK+V VR D NVPL+D   ITDDTRIRAA+PTI  LI  GAKVILS+H GRPKG V     L P+  RLSELLG  V K D CIGP+ E  V ++  A       E  +      KNE+ FA  L  L +      F    ++H STEG  K LKPS   F +E+EL  L G V  P+  L    GGSK   K
Sbjct:    1 MAKRSLASLNAGDLSGKRVLVRVDFNVPLNDTGAITDDTRIRAALPTINDLIGKGAKVILSAHFGRPKGQVNDAMRLTPVAARLSELLGKPVAKTDSCIGPDAEAKVGAM--ANGDVVLLENVRFFAEEEKNEAGFAEKLAGLAEVYVNDAFGAAHRAHASTEGVTKFLKPSVAGFLMEKELQYLQGAVDEPKRPLAAIVGGSKVSSK 206          
BLAST of EY660096 vs. ExPASy Swiss-Prot
Match: PGK_SYNY3 (Phosphoglycerate kinase OS=Synechocystis sp. (strain PCC 6803) GN=pgk PE=3 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 4.972e-37
Identity = 97/206 (47.09%), Postives = 123/206 (59.71%), Query Frame = 1
Query:  334 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLLKAGSSSWKREGPQRGRK-NESEFARNLPLWQTL-CQ*GFWDRSKSHGSTEGSNKILKPSGGWFPLERELDSLVGGVQPPRGNLCP-CGGSKAPHK 939
            ++K+S+  L+ ADL GK+VFVR D NVPLD N +ITDDTRIRAA+PTIK L+  GAKVIL SH GRPKG V     L P+  RL ELLG  VVK DDCIG EV   +ASL   G +  +      G + N++EFA+ L     L     F    ++H STEG    L P+   + +E+EL  L G ++ P+  L    GGSK   K
Sbjct:    2 LSKQSIANLTEADLAGKRVFVRVDFNVPLD-NGSITDDTRIRAALPTIKDLLSKGAKVILGSHFGRPKGKVVDSMRLTPVGDRLGELLGQPVVKCDDCIGAEVTAKIASLPNGGVALLENLRFHAGEEGNDAEFAKALAANADLYVNDAFGTAHRAHASTEGVTHFLSPNVAGYLIEKELQFLQGAIEAPKRPLVAIVGGSKVSSK 206          
BLAST of EY660096 vs. ExPASy Swiss-Prot
Match: PGK_SYNP2 (Phosphoglycerate kinase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=pgk PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.108e-36
Identity = 95/206 (46.12%), Postives = 122/206 (59.22%), Query Frame = 1
Query:  334 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLLKAGSSSWKREGPQRG-RKNESEFARNLPLWQTL-CQ*GFWDRSKSHGSTEGSNKILKPSGGWFPLERELDSLVGGVQPPRGNLCP-CGGSKAPHK 939
            MAKKSV  L+ ADL GK+VFVR D NVPL+++  ITDDTRIRAA+PTIK+L + GAKVIL SH+GRPKG V     L P+  RLSELLG  V K DDC+G  V + +A+L     +  +      G  KN+ EFA+ L     +     F    ++HGSTEG    +  S     +E+EL  L G ++ P+  L    GGSK   K
Sbjct:    1 MAKKSVANLTEADLSGKRVFVRVDFNVPLNESGVITDDTRIRAALPTIKYLTEKGAKVILGSHMGRPKGQVVDSMRLTPVAARLSELLGQSVTKCDDCVGDAVNQAIANLGNGQVALLENLRFNPGEEKNDPEFAKQLAANADIYVNDAFGTAHRAHGSTEGVTHHVDTSVAGLLIEKELQFLKGAIEAPKRPLVAIVGGSKVSSK 206          
BLAST of EY660096 vs. ExPASy Swiss-Prot
Match: PGK_CYAP4 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=pgk PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.108e-36
Identity = 98/211 (46.45%), Postives = 121/211 (57.35%), Query Frame = 1
Query:  334 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG------VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLLKAGSSSWKREGPQRGRK-NESEFARNLPLWQTL-CQ*GFWDRSKSHGSTEGSNKILKPSGGWFPLERELDSLVGGVQPPRGNLCP-CGGSKAPHK 939
            M+KK+V  LS ADL GK+V VR D NVPLDD   ITDDTRIRAA+PTI+ L   GAKVILSSH GRPKG      V  KF L P+  RLSELLG  V K +DCIG EV+  VA++        +      G + N  EFA+ L     L     F    ++H STEG  + L+PS   + +E+EL  L   ++ P+  L    GGSK   K
Sbjct:    1 MSKKTVANLSAADLAGKRVLVRVDFNVPLDDQGKITDDTRIRAALPTIQDLTSKGAKVILSSHFGRPKGETFAERVKDKFRLTPVAARLSELLGKPVPKPNDCIGEEVKAQVAAMQNGDVLLLENVRFHPGEEANTPEFAQELASVADLYVNDAFGTAHRAHASTEGVTRYLRPSVAGYLIEKELQYLQSAIENPQRPLAAIVGGSKVSSK 211          
BLAST of EY660096 vs. ExPASy Swiss-Prot
Match: PGK_SYNPW (Phosphoglycerate kinase OS=Synechococcus sp. (strain WH7803) GN=pgk PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.889e-36
Identity = 98/208 (47.12%), Postives = 118/208 (56.73%), Query Frame = 1
Query:  334 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLLKAGSSSWKREGPQ---RGRKNESEFARNLP-LWQTLCQ*GFWDRSKSHGSTEGSNKILKPSGGWFPLERELDSLVGGVQPPRGNLCP-CGGSKAPHK 939
            MAK+S+  L+  DL GK+V VR D NVPL+D   ITDDTRIRAA+PTI  LI  GAKVILS+H GRPKG V     L P+  RLSELLG  V K D CIGP+ E  V ++  A       E  +      KNE+ FA  L  L +      F    ++H STEG  K LKP+   F +E+EL  L G V  P+  L    GGSK   K
Sbjct:    1 MAKRSLASLNAGDLSGKRVLVRVDFNVPLNDAGAITDDTRIRAALPTINDLIGKGAKVILSAHFGRPKGQVNDAMRLTPVAARLSELLGKPVAKTDSCIGPDAEAKVGAM--ADGDVVLLENVRFFAEEEKNEAGFAEKLAGLAEVYVNDAFGAAHRAHASTEGVTKFLKPAVAGFLMEKELQYLQGAVDEPKRPLAAIVGGSKVSSK 206          
BLAST of EY660096 vs. ExPASy Swiss-Prot
Match: PGK_SYNS9 (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9902) GN=pgk PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.223e-36
Identity = 94/206 (45.63%), Postives = 115/206 (55.83%), Query Frame = 1
Query:  334 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLLKAGSSSWKR-EGPQRGRKNESEFARNL-PLWQTLCQ*GFWDRSKSHGSTEGSNKILKPSGGWFPLERELDSLVGGVQPPRGNLCP-CGGSKAPHK 939
            MAK+S+  L+  DL GK+V VR D NVPL+D   ITDDTRIRAA+PTI  L+  GAKV+L++H GRPKG V     L P+  RLSELLG  V K D CIGP+ E  V ++        +         KN+S FA  L  L        F    ++H STEG  K LKPS   F +E+EL  L G V  P+  L    GGSK   K
Sbjct:    1 MAKRSLASLNAGDLSGKRVLVRVDFNVPLNDAGAITDDTRIRAALPTINDLVGKGAKVVLAAHFGRPKGQVNEAMRLTPVAARLSELLGKTVTKTDSCIGPDAEAKVGAMANGDVVLLENVRFVAEEEKNDSGFAEKLAALADVYVNDAFGAAHRAHASTEGVTKFLKPSVAGFLMEKELQYLQGAVDEPKRPLAAIVGGSKVSSK 206          
BLAST of EY660096 vs. ExPASy Swiss-Prot
Match: PGK_SYNS3 (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9311) GN=pgk PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.497e-36
Identity = 96/208 (46.15%), Postives = 121/208 (58.17%), Query Frame = 1
Query:  334 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLLKAGSSSWKREGPQ---RGRKNESEFARNLP-LWQTLCQ*GFWDRSKSHGSTEGSNKILKPSGGWFPLERELDSLVGGVQPPRGNLCP-CGGSKAPHK 939
            MAK+S+ +L+ +DL GK+V VR D NVPL+D   ITDDTRIRAA+PTI  LI  GAKVIL++H GRPKG V  K  L P+  RLSELL   V K + CIGP+ E  V ++  A       E  +      KN+++FA+ L  L        F    ++H STEG  K LKPS   F +E+EL  L G V  P+  L    GGSK   K
Sbjct:    1 MAKRSLAKLNTSDLSGKRVLVRVDFNVPLNDAGAITDDTRIRAALPTINDLIGKGAKVILAAHFGRPKGQVNDKMRLTPVATRLSELLSKPVTKTESCIGPDAEAKVNAM--ANGDVVLLENVRFFAEEEKNDADFAKQLAGLADVYVNDAFGAAHRAHASTEGVTKFLKPSVAGFLMEKELQYLQGAVDEPKRPLAAIVGGSKVSSK 206          
BLAST of EY660096 vs. ExPASy Swiss-Prot
Match: PGK_PROMA (Phosphoglycerate kinase OS=Prochlorococcus marinus GN=pgk PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.497e-36
Identity = 95/208 (45.67%), Postives = 123/208 (59.13%), Query Frame = 1
Query:  334 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLLKAG---SSSWKREGPQRGRKNESEFARNL-PLWQTLCQ*GFWDRSKSHGSTEGSNKILKPSGGWFPLERELDSLVGGVQPPRGNLCP-CGGSKAPHK 939
            MAK+S+  LS  DL GK+V VR D NVPL++  +ITDDTRIRAA+PTI+HLI+  A+VILS+H GRPKG V     L P+  RLSELLG  VVK + CIGP+ EK V  +         + +  G +   KN+SEFA+ L  L +      F    ++H STEG    L PS   + +E+EL  L G +  P+  L    GGSK   K
Sbjct:    1 MAKRSLSNLSVEDLCGKRVLVRVDFNVPLNEEGSITDDTRIRAALPTIQHLIEKEARVILSAHFGRPKGKVNEDMRLTPVSQRLSELLGKTVVKTESCIGPDAEKKVHEMSNGDVVLLENVRFIGEE--EKNDSEFAKKLASLAEVYVNDAFGAAHRAHASTEGVTNYLSPSVAGYLMEKELKYLQGAIDSPQRPLAAIVGGSKVSSK 206          
BLAST of EY660096 vs. ExPASy Swiss-Prot
Match: PGK_ACAM1 (Phosphoglycerate kinase OS=Acaryochloris marina (strain MBIC 11017) GN=pgk PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 7.179e-36
Identity = 95/206 (46.12%), Postives = 118/206 (57.28%), Query Frame = 1
Query:  334 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLLKAGSSSWKREGPQRGRK-NESEFARNLPLWQTL-CQ*GFWDRSKSHGSTEGSNKILKPSGGWFPLERELDSLVGGVQPPRGNLCP-CGGSKAPHK 939
            M+KK++  L+ ADL GK+V VRAD NVPLD +  ITDDTRIRAA+PTI+ L   GAKVIL+SH GRPKG V     L P+  RLSELLG  V K DDCIG EV   V +L     +  +      G + N+ EFAR L     L     F    ++H STEG    L PS   + +E+EL  L   ++ P+  L    GGSK   K
Sbjct:    1 MSKKTIANLTSADLSGKRVLVRADFNVPLDGDGKITDDTRIRAALPTIQDLTSKGAKVILASHFGRPKGQVNESMRLTPVAARLSELLGQAVTKCDDCIGDEVAAKVGALQNGQVALLENVRFHSGEEANDPEFARQLASVADLYVNDAFGTAHRAHASTEGVTHHLSPSVAGYLIEKELKYLQAAIEGPQRPLAAIVGGSKVSSK 206          
The following BLAST results are available for this feature:
BLAST of EY660096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_NOSP72.636e-3847.09Phosphoglycerate kinase OS=Nostoc punctiforme (str... [more]
PGK_SYNSC3.807e-3747.60Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNY34.972e-3747.09Phosphoglycerate kinase OS=Synechocystis sp. (stra... [more]
PGK_SYNP21.108e-3646.12Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_CYAP41.108e-3646.45Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGK_SYNPW1.889e-3647.12Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNS93.223e-3645.63Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNS35.497e-3646.15Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_PROMA5.497e-3645.67Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_ACAM17.179e-3646.12Phosphoglycerate kinase OS=Acaryochloris marina (s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-018-E01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660096 ID=EY660096; Name=EY660096; organism=Citrus sinensis; type=EST; length=944bp
CCACGCGTCCGCATTTTCCTTCTCCCTTCTTCAATCAAACCAAAACCCAC
TTCCCATTTCTCCACTTTGTCGACAAAGTTTCAATCTTTTGCGCCTTTAC
TACGCCACTCCACTCCCACCACATCAATGGCTTCAGCCACCGCTCCCACT
ACTTTATCTCTCGTCAAAACCGCCGCAAGTTCATCCCTTTCTTCCCCACG
CGCCTCCTTCCTGCGCATGCCCACTTCAGCATCCCGCAGGCTGGGGTTCT
CCGCAGCCGACCCGCTGCTGACCTGCCATGTGGCGTCGAGGCTGAGCTCG
ATTAAGACGAAGGGCACTCGTGCGGTGGTGTCGATGGCGAAGAAGAGCGT
GGGGGAGTTGAGTGGAGCTGATTTGAAAGGGAAGAAGGTGTTTGTAAGAG
CTGACTTGAATGTGCCTTTGGATGATAATCAGAACATTACTGATGATACT
AGAATCAGAGCTGCTGTTCCCACCATCAAGCATTTGATTCAAAATGGAGC
TAAAGTCATTCTTTCTAGCCACTTGGGAAGACCAAAGGGTGTTACTCCGA
AATTCAGTTTGGCTCCTCTTGTGCCTCGTCTTTCTGAACTCCTGGGCATT
CAGGTTGTGAAAGCTGATGACTGCATTGGGCCAGAAGTAGAAAAGCTGGT
AGCCTCACTCCTGAAAGCGGGGTCTTCCTCCTGGAAACGGGAGGGTCCTC
AAAGAGGGAGAAAAAACGAATCCGAGTTTGCAAGAAACTTGCCTCTTTGG
CAAACTCTATGTCAATGAGGCTTTTGGGACCGCTCCAAAAGCCATGGCTC
AACTGAGGGAAGCAACAAAATTTTGAAGCCTTCTGGTGGCTGGTTCCCCC
TTGAAAGAGAACTGGATTCCTTGGTGGGGGGGGTTCAACCCCCAAGAGGC
AATTTGTGTCCTTGTGGGGGGTCAAAGGCTCCTCACAAAAGGAG
back to top