EY660095

Overview
NameEY660095
Unique NameEY660095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY660095_ssr653 microsatellite EY660095_ssr653:653..664. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
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BLAST of EY660095 vs. ExPASy Swiss-Prot
Match: MPCP_YEAST (Mitochondrial phosphate carrier protein OS=Saccharomyces cerevisiae GN=MIR1 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.795e-25
Identity = 75/198 (37.88%), Postives = 100/198 (50.51%), Query Frame = 1 
Query:   19 LLHVALCPFEAVKVRVQTQPGFARGLGDGLPKFVKSEGALGLYKGIVPLWGRQIPYTMMKFASFETIVEMIYKHAVPTPKDQCSKPLQLGISFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDVSAIP*LDIIKAKLLH*GYSLF*THFLVL*AVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVG 612
            L  +ALCP EA ++R+ +QP FA GL  G  + +K EG    Y G  P+  +QIPY + KF  FE   E  Y  A   PK++ S      ++   G  AG+  AIVS PAD L+S +N  K A                     G S   T  L+    K+LG +G F  GLP R+VM+GTLT  Q+GIY + K  +G
Sbjct:  128 LADIALCPLEATRIRLVSQPQFANGLVGGFSRILKEEGIGSFYSGFTPILFKQIPYNIAKFLVFERASEFYYGFA--GPKEKLSSTSTTLLNLLSGLTAGLAAAIVSQPADTLLSKVNKTKKAP--------------------GQS---TVGLLAQLAKQLGFFGSFA-GLPTRLVMVGTLTSLQFGIYGSLKSTLG 299
The following BLAST results are available for this feature:
BLAST of EY660095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
MPCP_YEAST6.795e-2537.88Mitochondrial phosphate carrier protein OS=Sacchar... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-018-D12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660095 ID=EY660095; Name=EY660095; organism=Citrus sinensis; type=EST; length=886bp
CCACGCGTCCGGAGTTCATTGTTGCATGTTGCTCTTTGCCCCTTTGAGGC
CGTGAAGGTCCGTGTTCAGACTCAGCCTGGTTTTGCCAGAGGTTTGGGTG
ATGGACTTCCCAAGTTTGTTAAATCTGAGGGCGCTCTTGGTTTGTACAAG
GGTATTGTTCCTCTTTGGGGGCGTCAGATTCCATATACTATGATGAAGTT
TGCTTCTTTTGAAACCATTGTTGAGATGATCTACAAGCATGCAGTTCCCA
CACCAAAGGACCAGTGCAGCAAACCTCTGCAGCTTGGAATTAGTTTTGCT
GGTGGTTATGTGGCTGGTGTTTTCTGTGCTATTGTGTCGCATCCTGCTGA
CAATCTTGTCTCTTTCCTTAACAATGCCAAAGGAGCAACTGTTGGTGATG
TGAGTGCTATACCTTGACTTGATATTATAAAAGCTAAACTGTTGCACTAA
GGCTATTCTTTGTTTTAAACCCATTTTCTGGTTTTGTAGGCTGTGAAGAA
GCTAGGTTTGTGGGGTCTGTTTACCCGTGGGCTTCCTCTCCGTATTGTCA
TGATTGGAACACTCACTGGAGCTCAATGGGGAATCTATGATGCATTCAAA
GTTTTTGTGGGACTGCCAACCACTGGTGGCGTTGCTCCTGTTGCTCCTGC
CCCTGCTGCTGCTGAGCTTGCAAAAGTGTAGGTCAACCAAATAGAATTGT
TTTATTTTGCGTTTTGTGGATTCCAGGAGAACTTCTTGATAGGGATTAAT
AACATAGGTGACAAAATTGAAAGCGCTTGAGTGTCTCCAGTCAGAGTATC
TTTATAATTGAGCACTATTTGTTCCAGCTTAAATTTGCTTTTGCTGAGGA
TGGTTTTTTTTTCATCAAATATCGAAAACTTTTGAC
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